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TABLE OF CONTENTS
Issue No. 08 - August (vol. 17)
ISSN: 1045-9219

Editorial: Special Section on High-Performance Computational Biology (PDF)

S. Aluru , Department of Electrical and Computer Engineering, Iowa State University, Ames, IA 50011
N.M. Amato , Department of Computer Science, Texas A&M University, College Station, TX 77843-3112
D.A. Bader , College of Computing, Georgia Institute of Technology, Atlanta, GA 30332
pp. 737-739

ScalaBLAST: A Scalable Implementation of BLAST for High-Performance Data-Intensive Bioinformatics Analysis (Abstract)

C. Oehmen , Computational Sciences and Mathematics Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, PO Box 999, MSIN: K7-90, Richland, WA 99352
J. Nieplocha , Computational Sciences and Mathematics Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, PO Box 999, MSIN: K7-90, Richland, WA 99352
pp. 740-749

Parallel Pattern-Based Systems for Computational Biology: A Case Study (Abstract)

Weiguo Liu , School of Computer Engineering, Nanyang Technological University, N4-02a-32, Singapore 639798
B. Schmidt , School of Computer Engineering, Nanyang Technological University, N4-02a-32, Singapore 639798
pp. 750-763

High-Performance Direct Pairwise Comparison of Large Genomic Sequences (Abstract)

C. Mueller , Computer Science Department, Indiana University, 215 Lindley Hall, Bloomington, IN 47405
M.M. Dalkilic , Indiana University, Eigenmann Hall, Rm. 1004, 1900 East 10th Street, Bloomington, IN 47405
A. Lumsdaine , Computer Science Department, Indiana University, 215 Lindley Hall, Bloomington, IN 47405
pp. 764-772

Dynamic Load Balancing for the Distributed Mining of Molecular Structures (Abstract)

G. Di Fatta , Department of Computer and Information Science, University of Konstanz, Box M712, 78457 Konstanz, Germany. G. Di Fatta is also with the High Performance Computing and Networking Institute of the Italian National Research Council (ICAR-CNR), Palermo, Italy
M.R. Berthold , Department of Computer and Information Science, University of Konstanz, Box M712, 78457 Konstanz, Germany. G. Di Fatta is also with the High Performance Computing and Networking Institute of the Italian National Research Council (ICAR-CNR), Palermo, Italy
pp. 773-785

Predictor@Home: A "Protein Structure Prediction Supercomputer' Based on Global Computing (Abstract)

M. Taufer , Department of Computer Science, University of Texas at El Paso, 500 West University Ave., El Paso, TX 79968
Chahm An , Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037
A. Kerstens , Department of Computer Science, University of Texas at El Paso, 500 West University Ave., El Paso, TX 79968
C.L. Brooks III , Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037
pp. 786-796

Adaptive Electrocardiogram Feature Extraction on Distributed Embedded Systems (Abstract)

R. Jafari , Computer Science Department, University of California, Los Angeles, Los Angeles, CA 90095
H. Noshadi , Computer Science Department, University of California, Los Angeles, Los Angeles, CA 90095
S. Ghiasi , Department of Electrical and Computer Engineering, University of California, Davis, Davis, CA 95616
M. Sarrafzadeh , Computer Science Department, University of California, Los Angeles, Los Angeles, CA 90095
pp. 797-807

Optimal Resource Allocation in Overlay Multicast (Abstract)

Yi Cui , Electrical Engineering and Computer Science Department, Vanderbilt University, Box 1679, Station B, Nashville, TN 37325
Yuan Xue , Electrical Engineering and Computer Science Department, Vanderbilt University, Box 1679, Station B, Nashville, TN 37325
K. Nahrstedt , Department of Computer Science, University of Illinois at Urbana-Champaign, 201 N. Goodwin Avenue, Urbana, IL 61801
pp. 808-823

On Composing Stream Applications in Peer-to-Peer Environments (Abstract)

Xiaohui Gu , IBM T.J. Watson Research Center, Hawthorne, New York 10532
K. Nahrstedt , Department of Computer Science, University of Illinois at Urbana-Champaign, 201 N. Goodwin Ave., Urbana, IL 61801
pp. 824-837

Extended Dominating Set and Its Applications in Ad Hoc Networks Using Cooperative Communication (Abstract)

Jie Wu , Department of Computer Science and Engineering, Florida Atlantic University, Boca Raton, FL 33431
M. Cardei , Department of Computer Science and Engineering, Florida Atlantic University, Boca Raton, FL 33431
Fei Dai , Department of Electrical and Computer Engineering, North Dakota State University, Fargo, ND 58105
Shuhui Yang , Department of Computer Science and Engineering, Florida Atlantic University, Boca Raton, FL 33431
pp. 851-864

Location-Aware Combinatorial Key Management Scheme for Clustered Sensor Networks (Abstract)

M.F. Younis , Department of Computer Science and Electrical Engineering, University of Maryland Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250
K. Ghumman , Department of Computer Science and Electrical Engineering, University of Maryland Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250
M. Eltoweissy , Bradley Department of Electrical and Computer Engineering, Virginia Tech, Falls Church, VA 22043
pp. 865-882
SPECIAL SECTION on High-Performance Computational Biology
Regular Papers
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