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TABLE OF CONTENTS
Issue No. 04 - October-December (vol. 6)
ISSN: 1545-5963
PAPERS

A Statistical Change Point Model Approach for the Detection of DNA Copy Number Variations in Array CGH Data (Abstract)

Jie Chen , University of Missouri-Kansas City, Kansas City
Yu-Ping Wang , University of Missouri-Kansas City, Kansas City
pp. 529-541

Comparison of Tree-Child Phylogenetic Networks (Abstract)

Francesc Rosselló , University of the Balearic Islands, Palma de Mallorca
Gabriel Valiente , Technical University of Catalonia, Barcelona
Gabriel Cardona , University of the Balearic Islands, Palma de Mallorca
pp. 552-569

Heuristic Reusable Dynamic Programming: Efficient Updates of Local Sequence Alignment (Abstract)

Ahmed H. Tewfik , University of Minnesota, Minneapolis
Changjin Hong , University of Minnesota, Minneapolis
pp. 570-582

Evaluating Protein Similarity from Coarse Structures (Abstract)

Xiang-Sun Zhang , Chinese Academy of Sciences, Beijing
Zhong-Wei Zhan , China Aerospace Engineering Consultation Center, China
Ling-Yun Wu , Chinese Academy of Sciences, Beijing
Yong Wang , Chinese Academy of Sciences, Beijing
Luonan Chen , Osaka Sangyo University, Osaka
Ji-Hong Zhang , Beijing Foreign Studies University, Beijing
pp. 583-593

Inferential Clustering Approach for Microarray Experiments with Replicated Measurements (Abstract)

Miquel Salicrú , Barcelona University, Spain
Sergi Vives , Barcelona University, Spain
Tian Zheng , Columbia University, New York
pp. 594-604

Laplacian Linear Discriminant Analysis Approach to Unsupervised Feature Selection (Abstract)

Satoshi Niijima , Kyoto University, Kyoto
Yasushi Okuno , Kyoto University, Kyoto
pp. 605-614

On Nakhleh's Metric for Reduced Phylogenetic Networks (Abstract)

Gabriel Cardona , University of the Balearic Islands, Palma de-Mallorca
Francesc Rosselló , University of the Balearic Islands, Palma de-Mallorca
Gabriel Valiente , Technical University of Catalonia, Barcelona
Mercè Llabrés , University of the Balearic Islands, Palma de-Mallorca
pp. 629-638

Protein Structure Classification Based on Conserved Hydrophobic Residues (Abstract)

Sumeet Dua , Louisiana Tech University, Ruston
Pradeep Chowriappa , Louisiana Tech University, Ruston
Jinko Kanno , Louisiana Tech University, Ruston
Hilary W. Thompson , Louisiana State University Health Sciences Center, New Orleans
pp. 639-651

A Positive Detecting Code and Its Decoding Algorithm for DNA Library Screening (Abstract)

Hiroaki Uehara , Keio University, Yokohama
Masakazu Jimbo , Nagoya University, Nagoya
pp. 652-666

Constructing Level-2 Phylogenetic Networks from Triplets (Abstract)

Leen Stougie , Centrum voor Wiskunde en Informatica (CWI) and Free University, Amsterdam
Leo van Iersel , University of Canterbury, Christchurch
Teun Boekhout , Centraalbureau voor Schimmelcultures (CBS), Utrecht
Steven Kelk , Centrum voor Wiskunde en Informatica (CWI), Amsterdam
Judith Keijsper , Technische Universiteit Eindhoven, Eindhoven
Ferry Hagen , Centraalbureau voor Schimmelcultures (CBS), Utrecht
pp. 667-681

On the Approximation of Optimal Structures for RNA-RNA Interaction (Abstract)

Saad Mneimneh , Hunter College, City University of New York, New York
pp. 682-688
SHORT PAPERS

Evaluation of Geometric Complementarity between Molecular Surfaces Using Compactly Supported Radial Basis Functions (Abstract)

Ernesto Moreno , Center of Molecular Immunology, Havana
Luis A. Diago , Tokyo Institute of Technology, Tokyo
pp. 689-694

Machine Learning Techniques for the Automated Classification of Adhesin-Like Proteins in the Human Protozoan Parasite Trypanosoma cruzi (Abstract)

José L. Ramírez , Instituto de Estudios Avanzados, Caracas
Ana M. González , Universidad Autónoma de Madrid, Madrid
José R. Dorronsoro , Universidad Autónoma de Madrid, Madrid
Francisco J. Azuaje , Research Center for Publich Health (CRP-Santé), Luxembourg
José F. da Silveira , Escola Paulista de Medicina, UNIFESP, Brazil
pp. 695-702
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