The Community for Technology Leaders
SC Conference (2011)
Seattle, Washington
Nov. 12, 2011 to Nov. 18, 2011
ISBN: 978-1-4503-0771-0
TABLE OF CONTENTS
Papers

SC 2011 Keynote (Abstract)

pp. i

Atomistic nanoelectronic device engineering with sustained performances up to 1.44 PFlop/s (Abstract)

Mathieu Luisier , Network for Comput. Nanotechnol., Purdue Univ., West Lafayette, IN, USA
Timothy B. Boykin , ECE Dept., Univ. of Alabama in Huntsville, Huntsville, AL, USA
Gerhard Klimeck , Network for Comput. Nanotechnol., Purdue Univ., West Lafayette, IN, USA
Wolfgang Fichtner , Integrated Syst. Lab., ETH Zurich, Zurich, Switzerland
pp. 1-11

Petaflop biofluidics simulations on a two million-core system (Abstract)

Massimo Bernaschi , Ist. Applicazioni Calcolo, Consiglio Naz. delle Ric. Rome, Rome, Italy
Mauro Bisson , Sch. of Eng. & Appl. Sci., Harvard Univ., Cambridge, MA, USA
Toshio Endo , Grad. Sch. of Inf. Sci. & Eng., Tokyo Inst. of Technol., Tokyo, Japan
Satoshi Matsuoka , Global Sci. Inf. & Comput. Center, Tokyo Inst. of Technol., Tokyo, Japan
Massimiliano Fatica , Nvidia Corp., Santa Clara, CA, USA
pp. 1-12

Peta-scale phase-field simulation for dendritic solidification on the TSUBAME 2.0 supercomputer (Abstract)

Takashi Shimokawabe , Tokyo Inst. of Technol., Tokyo, Japan
Takayuki Aoki , Tokyo Inst. of Technol., Tokyo, Japan
Tomohiro Takaki , Kyoto Inst. of Technol., Kyoto, Japan
Akinori Yamanaka , Tokyo Inst. of Technol., Tokyo, Japan
Akira Nukada , Tokyo Inst. of Technol., Tokyo, Japan
Toshio Endo , Tokyo Inst. of Technol., Tokyo, Japan
Naoya Maruyama , Tokyo Inst. of Technol., Tokyo, Japan
Satoshi Matsuoka , Tokyo Inst. of Technol., Tokyo, Japan
pp. 1-11

A new computational paradigm in multiscale simulations: Application to brain blood flow (Abstract)

Leopold Grinberg , Div. of Appl. Math., Brown Univ., Providence, RI, USA
Vitali Morozov , Argonne Nat. Lab., Argonne, IL, USA
Dmitry Fedosov , Inst. of Complex Syst., FZ Juelich, Julich, Germany
Joseph A. Insley , Argonne Nat. Lab., Argonne, IL, USA
Michael E. Papka , Argonne Nat. Lab., Argonne, IL, USA
Kalyan Kumaran , Argonne Nat. Lab., Argonne, IL, USA
George Em Karniadakis , Div. of Appl. Math., Brown Univ., Providence, RI, USA
pp. 1-12

Parallel reduction to condensed forms for symmetric eigenvalue problems using aggregated fine-grained and memory-aware kernels (Abstract)

Azzam Haidar , Univ. of Tennessee, Knoxville, TN, USA
Hatem Ltaief , KAUST Supercomput. Lab., Thuwal, Saudi Arabia
Jack Dongarra , Univ. of Tennessee, Knoxville, TN, USA
pp. 1-11

Flexible resource allocation for reliable virtual cluster computing systems (Abstract)

Thomas J. Hacker , Comput. & Inf. Technol., Purdue Univ., West Lafayette, IN, USA
Kanak Mahadik , Comput. & Inf. Technol., Purdue Univ., West Lafayette, IN, USA
pp. 1-12

Sniper: Exploring the level of abstraction for scalable and accurate parallel multi-core simulation (Abstract)

Trevor E. Carlson , ELIS Dept., Ghent Univ., Ghent, Belgium
Wim Heirman , ELIS Dept., Ghent Univ., Ghent, Belgium
Lieven Eeckhout , ELIS Dept., Ghent Univ., Ghent, Belgium
pp. 1-12
Papers

Liszt: a domain specific language for building portable mesh-based PDE solvers (Abstract)

Alex Aiken , Stanford University
Zachary DeVito , Stanford University
Montserrat Medina , Stanford University
Frank Ham , Stanford University
Erich Elsen , Stanford University
Niels Joubert , Stanford University
Francisco Palacios , Stanford University
Karthik Duraisamy , Stanford University
Mike Barrientos , Stanford University
Eric Darve , Stanford University
Pat Hanrahan , Stanford University
Juan Alonso , Stanford University
Stephen Oakley , Stanford University
pp. 1-12

Simplified parallel domain traversal (Abstract)

David Erickson , Oak Ridge National Laboratory
Jian Huang , The University of Tennessee, Knoxville
Jingyuan Wang , The University of Tennessee, Knoxville
Wesley Kendall , The University of Tennessee, Knoxville
Melissa Allen , The University of Tennessee, Knoxville
Tom Peterka , Argonne National Laboratory
pp. 1-11
Papers

CudaDMA: optimizing GPU memory bandwidth via warp specialization (Abstract)

Henry Cook , UC Berkeley
Michael Bauer , Stanford University
Brucek Khailany , NVIDIA Research
pp. 1-11

A similarity measure for time, frequency, and dependencies in large-scale workloads (Abstract)

Mario Lassnig , Inst. of Comput. Sci., Univ. of Innsbruck, Innsbruck, Austria
Thomas Fahringer , Inst. of Comput. Sci., Univ. of Innsbruck, Innsbruck, Austria
Vincent Garonne , Eur. Organ. for Nucl. Res., Geneva, Switzerland
Angelos Molfetas , Eur. Organ. for Nucl. Res., Geneva, Switzerland
Martin Barisits , Eur. Organ. for Nucl. Res., Geneva, Switzerland
pp. 1-11

I/O streaming evaluation of batch queries for data-intensive computational turbulence (Abstract)

Kalin Kanov , Dept. of Comput. Sci., Johns Hopkins Univ., Baltimore, MD, USA
Eric Perlman , Dept. of Comput. Sci., Johns Hopkins Univ., Baltimore, MD, USA
Randal Burns , Dept. of Comput. Sci., Johns Hopkins Univ., Baltimore, MD, USA
Yanif Ahmad , Dept. of Comput. Sci., Johns Hopkins Univ., Baltimore, MD, USA
Alexander Szalay , Dept. of Phys. & Astron., Johns Hopkins Univ., Baltimore, MD, USA
pp. 1-10

Evaluating the viability of process replication reliability for exascale systems (Abstract)

Kurt Ferreira , Scalable Syst. Software Dept., Sandia Nat. Labs., Albuquerque, NM, USA
Jon Stearley , Scalable Syst. Software Dept., Sandia Nat. Labs., Albuquerque, NM, USA
James H. Laros , Scalable Syst. Software Dept., Sandia Nat. Labs., Albuquerque, NM, USA
Ron Oldfield , Scalable Syst. Software Dept., Sandia Nat. Labs., Albuquerque, NM, USA
Kevin Pedretti , Scalable Syst. Software Dept., Sandia Nat. Labs., Albuquerque, NM, USA
Ron Brightwell , Scalable Syst. Software Dept., Sandia Nat. Labs., Albuquerque, NM, USA
Rolf Riesen , IBM Res., Dublin, Ireland
Patrick G. Bridges , Dept. of Comput. Sci., Univ. of New Mexico, Albuquerque, NM, USA
Dorian Arnold , Dept. of Comput. Sci., Univ. of New Mexico, Albuquerque, NM, USA
pp. 1-12

Simplified parallel domain traversal (Abstract)

Wesley Kendall , Dept. of Electr. Eng. & Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
Jingyuan Wang , Dept. of Electr. Eng. & Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
Melissa Allen , Dept. of Civil & Environ. Eng., Univ. of Tennessee, Knoxville, TN, USA
Tom Peterka , Math. & Comput. Sci. Div., Argonne Nat. Lab., Argonne, IL, USA
Jian Huang , Dept. of Electr. Eng. & Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
David Erickson , Comput. Earth Sci. Group, Oak Ridge Nat. Lab., Oak Ridge, TN, USA
pp. 1-11

TRACON: Interference-aware scheduling for data-intensive applications in virtualized environments (Abstract)

Ron C. Chiang , Dept. of Electr. & Comput. Eng., George Washington Univ., Washington, DC, USA
H. Howie Huang , Dept. of Electr. & Comput. Eng., George Washington Univ., Washington, DC, USA
pp. 1-12

Hardware/software co-design for energy-efficient seismic modeling (Abstract)

Jens Krueger , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
David Donofrio , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
John Shalf , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Marghoob Mohiyuddin , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Samuel Williams , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Leonid Oliker , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Franz-Josef Pfreundt , Comput. Sci. Div., Univ. of California at Berkeley, Berkeley, CA, USA
pp. 1-12

CudaDMA: Optimizing GPU memory bandwidth via warp specialization (Abstract)

Michael Bauer , Stanford Univ., Stanford, CA, USA
Henry Cook , UC Berkeley, Berkeley, CA, USA
pp. 1-11
Papers

Gyrokinetic toroidal simulations on leading multi- and manycore HPC systems (Abstract)

John Shalf , NERSC/CRD, Lawrence Berkeley National Laboratory, Berkeley
Samuel Williams , NERSC/CRD, Lawrence Berkeley National Laboratory, Berkeley
Stephane Ethier , Princeton Plasma Physics Laboratory, Princeton
Eun-Jin Im , Kookmin University, Seoul, Korea
Leonid Oliker , NERSC/CRD, Lawrence Berkeley National Laboratory, Berkeley
Khaled Z. Ibrahim , NERSC/CRD, Lawrence Berkeley National Laboratory, Berkeley
Kamesh Madduri , NERSC/CRD, Lawrence Berkeley National Laboratory, Berkeley
pp. 1-12

Unitary qubit lattice simulations of multiscale phenomena in quantum turbulence (Abstract)

Jeffrey Yepez , Air Force Research Laboratories, Hanscom AFB, MA
George Vahala , William & Mary, Williamsburg, VA
Bo Zhang , William & Mary, Williamsburg, VA
Linda Vahala , Old Dominion University, Norfolk, VA
Sean Ziegeler , High Performance Technologies, Inc., Reston, VA
Jonathan Carter , Computing Sciences, Lawrence Berkeley National Laboratory MS, Berkeley, CA
Min Soe , Rogers State University, Claremore, OK
pp. 1-11

Unitary qubit lattice simulations of multiscale phenomena in quantum turbulence (Abstract)

George Vahala , Dept. of Phys., William & Mary, Williamsburg, VA, USA
Min Soe , Dept. of Math. & Phys. Sci., Rogers State Univ., Claremore, OK, USA
Bo Zhang , Dept. of Phys., William & Mary, Williamsburg, VA, USA
Jeffrey Yepez , Air Force Res. Labs., Hanscom AFB, MA, USA
Linda Vahala , Dept. of Electr. & Comput. Eng., Old Dominion Univ., Norfolk, VA, USA
Jonathan Carter , Comput. Sci., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Sean Ziegeler , High Performance Technol., Inc., Reston, VA, USA
pp. 1-11

Scalable implementations of accurate excited-state coupled cluster theories: Application of high-level methods to porphyrin-based systems (Abstract)

Karol Kowalski , Environ. Mol. Sci. Lab., Pacific Northwest Nat. Lab., Richland, WA, USA
Sriram Krishnamoorthy , Comput. Sci. & Math. Div., Pacific Northwest Nat. Lab., Richland, WA, USA
Ryan M. Olson , Cray, Inc., St. Paul, MN, USA
Vinod Tipparaju , Comput. Sci. & Math. Div., Oak Ridge Nat. Lab., Oak Ridge, TN, USA
E. Apra , Comput. Sci. & Math. Div., Oak Ridge Nat. Lab., Oak Ridge, TN, USA
pp. 1-10
Papers

Using the TOP500 to trace and project technology and architecture trends (Abstract)

Timothy J. Dysart , Univ. of Notre Dame, Fitzpatrick Hall, Notre Dame, IN
Peter M. Kogge , Univ. of Notre Dame, Fitzpatrick Hall, Notre Dame, IN
pp. 1-11

Large scale plane wave pseudopotential density functional theory calculations on GPU clusters (Abstract)

Long Wang , Supercomput. Center of Comput. Network Inf. Center, Beijing, China
Weile Jia , Supercomput. Center of Comput. Network Inf. Center, Beijing, China
Xuebin Chi , Supercomput. Center of Comput. Network Inf. Center, Beijing, China
Yue Wu , Sch. of Math. Sci., Fudan Univ., Shanghai, China
Weiguo Gao , MOE Key Lab. of Comput. Phys. Sci., Fudan Univ., Shanghai, China
Lin-Wang Wang , Mater. Sci. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
pp. 1-10

Tiled QR factorization algorithms (Abstract)

Henricus Bouwmeester , Univ. of Colorado Denver, Denver, CO, USA
Mathias Jacquelin , ENS Lyon, Lyon, France
Julien Langou , Univ. of Colorado Denver, Denver, CO, USA
Yves Robert , ENS Lyon, Lyon, France
pp. 1-11

Using the TOP500 to trace and project technology and architecture trends (Abstract)

Peter M. Kogge , Univ. of Notre Dame, Notre Dame, IN, USA
Timothy J. Dysart , Univ. of Notre Dame, Notre Dame, IN, USA
pp. 1-11

Parallel random numbers: As easy as 1, 2, 3 (Abstract)

John K. Salmon , D E. Shaw Res., New York, NY, USA
Mark A. Moraes , D E. Shaw Res., New York, NY, USA
Ron O. Dror , D E. Shaw Res., New York, NY, USA
David E. Shaw , D E. Shaw Res., New York, NY, USA
pp. 1-12
Papers

BlobCR: efficient checkpoint-restart for HPC applications on IaaS clouds using virtual disk image snapshots (Abstract)

Bogdan Nicolae , INRIA Saclay, ÃŽle-de-France, France
Franck Cappello , University of Illinois at Urbana Champaign
pp. 1-12

Fast implementation of DGEMM on Fermi GPU (Abstract)

Ninghui Sun , Key Laboratory of Computer Architecture, Institute of Computing Technology
Yungang Bao , Key Laboratory of Computer Architecture, Institute of Computing Technology
Guangming Tan , Key Laboratory of Computer Architecture, Institute of Computing Technology
Everett Phillips , Nvidia Corporation
Linchuan Li , Key Laboratory of Computer Architecture, Institute of Computing Technology
Sean Triechle , Nvidia Corporation
pp. 1-11

Scalable fast multipole methods on distributed heterogeneous architectures (Abstract)

Qi Hu , University of Maryland, College Park
Ramani Duraiswami , University of Maryland, College Park
Nail A. Gumerov , University of Maryland, College Park
pp. 1-12

Extracting ultra-scale Lattice Boltzmann performance via hierarchical and distributed auto-tuning (Abstract)

Samuel Williams , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Leonid Oliker , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Jonathan Carter , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
John Shalf , Comput. Res. Div., Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
pp. 1-12
Papers

Virtual I/O caching: dynamic storage cache management for concurrent workloads (Abstract)

Mahmut Kandemir , Pennsylvania State University, University Park, Pennsylvania
Michael Frasca , Pennsylvania State University, University Park, Pennsylvania
Padma Raghavan , Pennsylvania State University, University Park, Pennsylvania
Ramya Prabhakar , Pennsylvania State University, University Park, Pennsylvania
pp. 1-11
Papers

Optimized pre-copy live migration for memory intensive applications (Abstract)

Costin Iancu , Lawrence Berkeley National Laboratory, Berkeley
Khaled Z. Ibrahim , Lawrence Berkeley National Laboratory, Berkeley
Steven Hofmeyr , Lawrence Berkeley National Laboratory, Berkeley
Eric Roman , Lawrence Berkeley National Laboratory, Berkeley
pp. 1-11

Large scale debugging of parallel tasks with AutomaDeD (Abstract)

Ignacio Laguna , Sch. of Electr. & Comput. Eng., Purdue Univ., West Lafayette, IN, USA
Todd Gamblin , Comput. Directorate, Lawrence Livermore Nat. Lab., Livermore, CA, USA
Bronis R. de Supinski , Comput. Directorate, Lawrence Livermore Nat. Lab., Livermore, CA, USA
Saurabh Bagchi , Sch. of Electr. & Comput. Eng., Purdue Univ., West Lafayette, IN, USA
Greg Bronevetsky , Comput. Directorate, Lawrence Livermore Nat. Lab., Livermore, CA, USA
Dong H. Anh , Comput. Directorate, Lawrence Livermore Nat. Lab., Livermore, CA, USA
Martin Schulz , Comput. Directorate, Lawrence Livermore Nat. Lab., Livermore, CA, USA
Barry Rountree , Comput. Directorate, Lawrence Livermore Nat. Lab., Livermore, CA, USA
pp. 1-10
Papers

An early performance analysis of POWER7-IH HPC systems (Abstract)

Adolfy Hoisie , Performance and Architecture Lab, Pacific Northwest National Laboratory, Richland, WA
Darren J. Kerbyson , Performance and Architecture Lab, Pacific Northwest National Laboratory, Richland, WA
Kevin J. Barker , Performance and Architecture Lab, Pacific Northwest National Laboratory, Richland, WA
pp. 1-11

Optimized pre-copy live migration for memory intensive applications (Abstract)

Khaled Z. Ibrahim , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Steven Hofmeyr , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Costin Iancu , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Eric Roman , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
pp. 1-11
Papers

Evaluating the viability of process replication reliability for exascale systems (Abstract)

Ron Brightwell , Sandia National Laboratories
Kevin Pedretti , Sandia National Laboratories
Dorian Arnold , University of New Mexico
Patrick G. Bridges , University of New Mexico
James H. Laros , Sandia National Laboratories
Ron Oldfield , Sandia National Laboratories
Jon Stearley , Sandia National Laboratories
Rolf Riesen , IBM Research, Ireland
Kurt Ferreira , Sandia National Laboratories
pp. 1-12

Avoiding hot-spots on two-level direct networks (Abstract)

Abhinav Bhatele , Center for Appl. Sci. Comput., Lawrence Livermore Nat. Lab., Livermore, CA, USA
Nikhil Jain , Dept. of Comput. Sci., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
William D. Gropp , Dept. of Comput. Sci., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
Laxmikant V. Kale , Dept. of Comput. Sci., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
pp. 1-11

Parallelization design on multi-core platforms in density matrix renormalization group toward 2-D Quantum strongly-correlated systems (Abstract)

Susumu Yamada , Japan Atomic Energy Agency, Kashiwa, Japan
Toshiyuki Imamura , Univ. of Electro-Commun., Chofu, Japan
Masahiko Machida , Japan Atomic Energy Agency, Kashiwa, Japan
pp. 1-10
Papers

Flexible resource allocation for reliable virtual cluster computing systems (Abstract)

Kanak Mahadik , Purdue University, West Lafayette, IN
Thomas J. Hacker , Purdue University, West Lafayette, IN
pp. 1-12

A fast solver for modeling the evolution of virus populations (Abstract)

Gerhard Niederbrucker , Res. Group Theor. & Applic. of Algorithms, Univ. of Vienna, Vienna, Austria
Wilfried N. Gansterer , Res. Group Theor. & Applic. of Algorithms, Univ. of Vienna, Vienna, Austria
pp. 1-11

Checkpointing strategies for parallel jobs (Abstract)

Marin Bougeret , ENS Lyon, Lyon, France
Henri Casanova , Univ. of Hawaii at Manoa, Honolulu, HI, USA
Mikael Rabie , ENS Lyon, Lyon, France
Yves Robert , ENS Lyon, Lyon, France
Frederic Vivien , ENS Lyon, Lyon, France
pp. 1-11

Scalable hashing for shared memory supercomputers (Abstract)

Eric Goodman , Sandia Nat. Labs., Albuquerque, NM, USA
M. Nicole Lemaster , Sandia Nat. Labs., Livermore, CA, USA
Edward Jimenez , Sandia Nat. Labs., Albuquerque, NM, USA
pp. 1-11
Papers

FTI: High performance Fault Tolerance Interface for hybrid systems (Abstract)

Leonardo Bautista-Gomez , Tokyo Inst. of Technol., Tokyo, Japan
Dimitri Komatitsch , Obs. Midi-Pyrenees, Univ. of Toulouse, Toulouse, France
Naoya Maruyama , Tokyo Inst. of Technol., Tokyo, Japan
Satoshi Matsuoka , Tokyo Inst. of Technol., Tokyo, Japan
pp. 1-12
Papers

Extracting ultra-scale Lattice Boltzmann performance via hierarchical and distributed auto-tuning (Abstract)

Jonathan Carter , Lawrence Berkeley National Laboratory
John Shalf , Lawrence Berkeley National Laboratory
Leonid Oliker , Lawrence Berkeley National Laboratory
Samuel Williams , Lawrence Berkeley National Laboratory
pp. 1-12

Copernicus: A new paradigm for parallel adaptive molecular dynamics (Abstract)

Sander Pronk , Dept. of Theor. Phys., R. Inst. of Technol., Stockholm, Sweden
Per Larsson , Dept. of Mol. Physiol. & Biol. Phys., Univ. of Virginia, Charlottesville, VA, USA
Iman Pouya , Dept. of Theor. Phys., R. Inst. of Technol., Stockholm, Sweden
Gregory R. Bowman , Dept. of Chem., Stanford Univ., Stanford, CA, USA
Imran S. Haque , Dept. of Comput. Sci., Stanford Univ., Stanford, CA, USA
Kyle Beauchamp , Biophys. Program, Stanford Univ., Stanford, CA, USA
Berk Hess , Dept. of Theor. Phys., R. Inst. of Technol., Stockholm, Sweden
Vijay S. Pande , Dept. of Chem., Stanford Univ., Stanford, CA, USA
Peter M. Kasson , Dept. of Mol. Physiol. & Biol. Phys., Univ. of Virginia, Charlottesville, VA, USA
Erik Lindahl , Dept. of Theor. Phys., R. Inst. of Technol., Stockholm, Sweden
pp. 1-10

Performance of the Community Earth System Model (Abstract)

Patrick H. Worley , Oak Ridge Nat. Lab., Oak Ridge, TN, USA
Anthony P. Craig , Nat. Center for Atmos. Res., Boulder, CO, USA
John M. Dennis , Nat. Center for Atmos. Res., Boulder, CO, USA
Arthur A. Mirin , Lawrence Livermore Nat. Lab., Livermore, CA, USA
Mark A. Taylor , Sandia Nat. Labs., Albuquerque, NM, USA
Mariana Vertenstein , Nat. Center for Atmos. Res., Boulder, CO, USA
pp. 1-11

Modeling and tolerating heterogeneous failures in large parallel systems (Abstract)

Eric Heien , INRIA, Sophia Antipolis, France
Derrick Kondo , INRIA, Sophia Antipolis, France
Ana Gainaru , UIUC, NCSA, Urbana, IL, USA
Dan LaPine , UIUC, NCSA, Urbana, IL, USA
Bill Kramer , UIUC, NCSA, Urbana, IL, USA
Franck Cappello , INRIA, Sophia Antipolis, France
pp. 1-11

Topology-aware data movement and staging for I/O acceleration on Blue Gene/P supercomputing systems (Abstract)

Venkatram Vishwanath , Argonne Nat. Lab., Argonne, IL, USA
Mark Hereld , Argonne Nat. Lab., Argonne, IL, USA
Vitali Morozov , Argonne Nat. Lab., Argonne, IL, USA
Michael E. Papka , Argonne Nat. Lab., Argonne, IL, USA
pp. 1-11

Gyrokinetic toroidal simulations on leading multi- and manycore HPC systems (Abstract)

Kamesh Madduri , NERSC/CRD, Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Khaled Z. Ibrahim , NERSC/CRD, Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Samuel Williams , NERSC/CRD, Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Eun-Jin Im , Sch. of Comput. Sci., Kookmin Univ., Seoul, South Korea
Stephane Ethier , Princeton Plasma Phys. Lab., Princeton, NJ, USA
John Shalf , NERSC/CRD, Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Leonid Oliker , NERSC/CRD, Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
pp. 1-12

End-to-end network QoS via scheduling of flexible resource reservation requests (Abstract)

Sushant Sharma , Comput. Sci. Center, Brookhaven Nat. Lab., Upton, NY, USA
Dimitrios Katramatos , Comput. Sci. Center, Brookhaven Nat. Lab., Upton, NY, USA
Dantong Yu , Comput. Sci. Center, Brookhaven Nat. Lab., Upton, NY, USA
pp. 1-10
Papers

Scalable stochastic optimization of complex energy systems (Abstract)

Miles Lubin , Argonne National Laboratory, Argonne, IL
Victor Zavala , Argonne National Laboratory, Argonne, IL
Mihai Anitescu , Argonne National Laboratory, Argonne, IL
Cosmin G. Petra , Argonne National Laboratory, Argonne, IL
pp. 1-64

ISABELA-QA: Query-driven analytics with ISABELA-compressed extreme-scale scientific data (Abstract)

Sriram Lakshminarasimhan , North Carolina State Univ., Raleigh, NC, USA
John Jenkins , North Carolina State Univ., Raleigh, NC, USA
Isha Arkatkar , North Carolina State Univ., Raleigh, NC, USA
Zhenhuan Gong , North Carolina State Univ., Raleigh, NC, USA
Hemanth Kolla , Sandia Nat. Lab., Livermore, CA, USA
Seung-Hoe Ku , New York Univ., New York, NY, USA
Stephane Ethier , Princeton Plasma Phys. Lab., Princeton, NJ, USA
Jackie Chen , Sandia Nat. Lab., Livermore, CA, USA
C. S. Chang , New York Univ., New York, NY, USA
Scott Klasky , Oak Ridge Nat. Lab., Oak Ridge, TN, USA
Robert Latham , Argonne Nat. Lab., Argonne, IL, USA
Robert Ross , Argonne Nat. Lab., Argonne, IL, USA
Nagiza F. Samatova , North Carolina State Univ., Raleigh, NC, USA
pp. 1-11
Papers

SciHadoop: array-based query processing in Hadoop (Abstract)

Joe B. Buck , UC Santa Cruz
Jeff LeFevre , UC Santa Cruz
Neoklis Polyzotis , UC Santa Cruz
Kleoni Ioannidou , UC Santa Cruz
Scott Brandt , UC Santa Cruz
Noah Watkins , UC Santa Cruz
Carlos Maltzahn , UC Santa Cruz
pp. 1-11

On the duality of data-intensive file system design: reconciling HDFS and PVFS (Abstract)

Wittawat Tantisiriroj , Carnegie Mellon University
Robert B. Ross , Argonne National Laboratory
Swapnil Patil , Carnegie Mellon University
Samuel J. Lang , Argonne National Laboratory
Seung Woo Son , Carnegie Mellon University
Garth Gibson , Argonne National Laboratory
pp. 1-12

BlobCR: Efficient checkpoint-restart for HPC applications on IaaS clouds using virtual disk image snapshots (Abstract)

Bogdan Nicolae , INRIA Saclay Ile-de-France, Orsay, France
Franck Cappello , INRIA Saclay Ile-de-France, Orsay, France
pp. 1-12

An early performance analysis of POWER7-IH HPC systems (Abstract)

Kevin J. Barker , Performance & Archit. Lab., Pacific Northwest Nat. Lab., Richland, WA, USA
Adolfy Hoisie , Performance & Archit. Lab., Pacific Northwest Nat. Lab., Richland, WA, USA
Darren J. Kerbyson , Performance & Archit. Lab., Pacific Northwest Nat. Lab., Richland, WA, USA
pp. 1-11

Improving communication performance in dense linear algebra via topology aware collectives (Abstract)

Edgar Solomonik , Dept. of Electr. Eng. & Comput. Sci., Univ. of California at Berkeley, Berkeley, CA, USA
Abhinav Bhatele , Center for Appl. Sci. Comput., Lawrence Livermore Nat. Lab., Livermore, CA, USA
James Demmel , Dept. of Electr. Eng. & Comput. Sci., Univ. of California at Berkeley, Berkeley, CA, USA
pp. 1-11

A scalable eigensolver for large scale-free graphs using 2D graph partitioning (Abstract)

Andy Yoo , Center for Appl. Sci. Comput., Lawrence Livermore Nat. Lab., Lawrence, CA, USA
Allison H. Baker , Center for Appl. Sci. Comput., Lawrence Livermore Nat. Lab., Lawrence, CA, USA
Roger Pearce , Dept. of Comput. Sci. & Eng., Texas A&M Univ., College Station, TX, USA
Van Emden Henson , Center for Appl. Sci. Comput., Lawrence Livermore Nat. Lab., Lawrence, CA, USA
pp. 1-11

Multithreaded global address space communication techniques for Gyrokinetic fusion applications on ultra-scale platforms (Abstract)

Robert Preissl , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Nathan Wichmann , CRAY Inc., St. Paul, MN, USA
Bill Long , CRAY Inc., St. Paul, MN, USA
John Shalf , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
Stephane Ethier , Princeton Plasma Phys. Lab., Princeton, NJ, USA
Alice Koniges , Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
pp. 1-11

Scalable stochastic optimization of complex energy systems (Abstract)

Miles Lubin , Argonne Nat. Lab., Argonne, IL, USA
Cosmin G. Petra , Argonne Nat. Lab., Argonne, IL, USA
Mihai Anitescu , Argonne Nat. Lab., Argonne, IL, USA
Victor Zavala , Argonne Nat. Lab., Argonne, IL, USA
pp. 1-10

An image compositing solution at scale (Abstract)

Kenneth Moreland , Sandia Nat. Labs., Albuquerque, NM, USA
Wesley Kendall , Univ. of Tennessee, Knoxville, TN, USA
Tom Peterka , Argonne Nat. Lab., Argonne, IL, USA
Jian Huang , Univ. of Tennessee, Knoxville, TN, USA
pp. 1-10

Optimizing symmetric dense matrix-vector multiplication on GPUs (Abstract)

Rajib Nath , Comput. Sci. & Eng., Univ. of California, San Diego, La Jolla, CA, USA
Stanimire Tomov , Electr. Eng. & Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
Tingxing Dong , Electr. Eng. & Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
Jack Dongarra , Electr. Eng. & Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
pp. 1-10

Scaling lattice QCD beyond 100 GPUs (Abstract)

R. Babich , Center for Comput. Sci., Boston Univ., Boston, MA, USA
M. A. Clark , Harvard-Smithsonian Center for Astrophys., Cambridge, MA, USA
B. Joo , Thomas Jefferson Nat. Accel. Facility, Newport News, VA, USA
G. Shi , Nat. Center for Supercomput. Applic., Univ. of Illinois, Urbana, IL, USA
R. C. Brower , Center for Comput. Sci., Boston Univ., Boston, MA, USA
S. Gottlieb , Dept. of Phys., Indiana Univ., Bloomington, IN, USA
pp. 1-11

Physis: An implicitly parallel programming model for stencil computations on large-scale GPU-accelerated supercomputers (Abstract)

Naoya Maruyama , CREST, Tokyo Inst. of Technol., Tokyo, Japan
Tatsuo Nomura , Google, Inc., Tokyo, Japan
Kento Sato , Tokyo Inst. of Technol., Tokyo, Japan
Satoshi Matsuoka , CREST, Tokyo Inst. of Technol., Tokyo, Japan
pp. 1-12
Papers

Multithreaded Global Address Space Communication Techniques for Gyrokinetic Fusion Applications on Ultra-Scale Platforms (Abstract)

Stephane Ethier , Princeton Plasma Physics Laboratory Princeton, NJ
Robert Preissl , Lawrence Berkeley National Laboratory Berkeley, CA
Bill Long , CRAY Inc. St. Paul, MN
John Shalf , Lawrence Berkeley National Laboratory Berkeley, CA
Alice Koniges , Lawrence Berkeley National Laboratory Berkeley, CA
Nathan Wichmann , CRAY Inc. St. Paul, MN
pp. 1-11

Deep and wide metrics for HPC resource capability and project usage (Abstract)

David Hart , Nat. Center for Atmos. Res., Boulder, CO, USA
pp. 1-7

Challenges in the management of high-performance computing centers: An organizational perspective (Abstract)

Nicholas Berente , Terry Coll. of Bus., Univ. of Georgia, Athens, GA, USA
Jennifer Claggett , Terry Coll. of Bus., Univ. of Georgia, Athens, GA, USA
pp. 1-8

Integrating multi-touch in high-resolution display environments (Abstract)

Brandt Westing , Texas Adv. Comput. Center, Austin, TX, USA
Benjamin Urick , Texas Adv. Comput. Center, Austin, TX, USA
Maria Esteva , Texas Adv. Comput. Center, Austin, TX, USA
Freddy Rojas , Texas Adv. Comput. Center, Austin, TX, USA
Weijia Xu , Texas Adv. Comput. Center, Austin, TX, USA
pp. 1-9

How to measure useful, sustained performance (Abstract)

William Kramer , Nat. Center for Supercomput. Applic., Univ. of Illinois, Urbana, IL, USA
pp. 1-18

Performance modeling for systematic performance tuning (Abstract)

Torsten Hoefler , Nat. Center for Supercomput. Applic., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
William Gropp , Nat. Center for Supercomput. Applic., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
Marc Snir , Nat. Center for Supercomput. Applic., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
William Kramer , Nat. Center for Supercomput. Applic., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
pp. 1-12

A long-distance infiniband interconnection between two clusters in production use (Abstract)

Sabine Richling , IT-Center, Univ. of Heidelberg, Heidelberg, Germany
Steffen Hau , IT-Center, Univ. of Mannheim, Mannheim, Germany
Heinz Kredel , IT-Center, Univ. of Mannheim, Mannheim, Germany
Hans-Gunther Kruse , IT-Center, Univ. of Mannheim, Mannheim, Germany
pp. 1-8

SPOTlight on testing: Stability, performance and operational testing of LANL HPC clusters (Abstract)

Georgia Pedicini , High Performance Comput. Syst., Los Alamos Nat. Lab., Los Alamos, NM, USA
Jennifer Green , High Performance Comput. Syst., Los Alamos Nat. Lab., Los Alamos, NM, USA
pp. 1-8

A Toolkit for Event Analysis and Logging (Abstract)

James Carey , IBM, Rochester, MN, USA
Philip Sanders , IBM, Rochester, MN, USA
pp. 1-7

Best practices for the deployment and management of production HPC clusters (Abstract)

Robert McLay , Texas Adv. Comput. Center (TACC), Univ. of Texas at Austin, Austin, TX, USA
Karl W. Schulz , Texas Adv. Comput. Center (TACC), Univ. of Texas at Austin, Austin, TX, USA
William L. Barth , Texas Adv. Comput. Center (TACC), Univ. of Texas at Austin, Austin, TX, USA
Tommy Minyard , Texas Adv. Comput. Center (TACC), Univ. of Texas at Austin, Austin, TX, USA
pp. 1-11

Logjam: A scalable unified log file archiver (Abstract)

Nicholas P. Cardo , Lawrence Berkeley Nat. Lab., Nat. Energy Res. Sci. Comput. Center, Berkeley, CA, USA
pp. 1-9

The NWSC benchmark suite: Using scientific throughput to measure supercomputer performance (Abstract)

Rory C. Kelly , Comput. & Inf. Syst. Lab., Nat. Center for Atmos. Res., Boulder, CO, USA
Siddartha S. Ghosh , Comput. & Inf. Syst. Lab., Nat. Center for Atmos. Res., Boulder, CO, USA
Si Liu , Comput. & Inf. Syst. Lab., Nat. Center for Atmos. Res., Boulder, CO, USA
Davide Del Vento , Comput. & Inf. Syst. Lab., Nat. Center for Atmos. Res., Boulder, CO, USA
Richard A. Valent , Comput. & Inf. Syst. Lab., Nat. Center for Atmos. Res., Boulder, CO, USA
pp. 1-5

Qserv: A distributed shared-nothing database for the LSST catalog (Abstract)

Daniel L. Wang , SLAC Nat. Accel. Lab., Menlo Park, CA, USA
Serge M. Monkewitz , Infrared Process. & Anal. Center, California Inst. of Technol., Pasadena, CA, USA
Kian-Tat Lim , SLAC Nat. Accel. Lab., Menlo Park, CA, USA
Jacek Becla , SLAC Nat. Accel. Lab., Menlo Park, CA, USA
pp. 1-11

Challenges of HPC monitoring (Abstract)

William Allcock , Argonne Nat. Lab., Argonne, IL, USA
Evan Felix , Pacific Northwest Nat. Lab., Richland, WA, USA
Mike Lowe , Indiana Univ., Bloomington, IN, USA
Randal Rheinheimer , Los Alamos Nat. Lab., Los Alamos, NM, USA
Joshi Fullop , Nat. Center for Supercomput. Applic., USA
pp. 1-6

Adaptive simulation of turbulent flow past a full car model (Abstract)

Niclas Jansson , Comput. Technol. Lab., KTH R. Inst. of Tech., Stockholm, Sweden
Johan Hoffman , Comput. Technol. Lab., KTH R. Inst. of Tech., Stockholm, Sweden
Murtazo Nazarov , Comput. Technol. Lab., KTH R. Inst. of Tech., Stockholm, Sweden
pp. 1-8

World-highest resolution global atmospheric model and its performance on the Earth Simulator (Abstract)

Keiko Takahashi , Japan Agency for Marine-Earth Sci. & Technol., Yokosuka, Japan
Ken'ichi Itakura , Japan Agency for Marine-Earth Sci. & Technol., Yokosuka, Japan
Satom Okura , Japan Agency for Marine-Earth Sci. & Technol., Yokosuka, Japan
Kiinihiko Watanabe , Japan Agency for Marine-Earth Sci. & Technol., Yokosuka, Japan
pp. 1-12

A survey of the practice of computational science (Abstract)

Prakash Prabhu , Princeton Univ., Princeton, NJ, USA
Thomas B. Jablin , Princeton Univ., Princeton, NJ, USA
Arun Raman , Princeton Univ., Princeton, NJ, USA
Yun Zhang , Princeton Univ., Princeton, NJ, USA
Jialu Huang , Princeton Univ., Princeton, NJ, USA
Hanjun Kim , Princeton Univ., Princeton, NJ, USA
Nick P. Johnson , Princeton Univ., Princeton, NJ, USA
Feng Liu , Princeton Univ., Princeton, NJ, USA
Soumyadeep Ghosh , Princeton Univ., Princeton, NJ, USA
Stephen Beard , Princeton Univ., Princeton, NJ, USA
Taewook Oh , Princeton Univ., Princeton, NJ, USA
Matthew Zoufaly , Princeton Univ., Princeton, NJ, USA
David Walker , Princeton Univ., Princeton, NJ, USA
David I. August , Princeton Univ., Princeton, NJ, USA
pp. 1-12

Performance evaluations of gyrokinetic Eulerian code GT5D on massively parallel multi-core platforms (Abstract)

Yasuhiro Idomura , Japan Atomic Energy Agency, Tokyo, Japan
Sebastien Jolliet , Japan Atomic Energy Agency, Tokyo, Japan
pp. 1-9

Janus: Co-designing HPC systems and facilities (Abstract)

Henry M. Tufo , Univ. of Colorado, Boulder, Boulder, CO, USA
Michael K. Patterson , Intel Corp., Hillsboro, OR, USA
Michael Oberg , Nat. Center for Atmos. Res., Boulder, CO, USA
Matthew Woitaszek , Nat. Center for Atmos. Res., Boulder, CO, USA
Guy Cobb , Univ. of Colorado, Boulder, Boulder, CO, USA
Robert Strong , Critical Facilities Technol., Arvada, CO, USA
Jim Gutowski , Dell, Inc., Round Rock, TX, USA
pp. 1-9
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