The Community for Technology Leaders
High Performance Computing and Grid in Asia Pacific Region, International Conference on (2005)
Beijing, China
Nov. 30, 2005 to Dec. 3, 2005
ISBN: 0-7695-2486-9
TABLE OF CONTENTS
Introduction
Session 1: System Architecture and Models (1)

Towards a more realistic BSP cost model (Abstract)

Jean Frederic Myoupo , Universite de Picardie-Jules Verne, France
Mounir Kechid , Universite de Picardie-Jules Verne, France
pp. 3-12
Session 1: System Architecture and Models (1)

A Scalable Dynamic Network Memory Service System (Abstract)

Mingyu Chen , Chinese Academy of Sciences, Beijing, China
Guozhong Sun , Graduate School of the Chinese Academy of Sciences, China
Huan Tang , Graduate School of the Chinese Academy of Sciences, China
Jianping Jianping Fan , Chinese Academy of Sciences, Beijing, China
pp. 21-27

Optimizing Strided Remote Memory Access Operations on the Quadrics QsNetII Network Interconnect (Abstract)

Vinod Tipparaju , Pacific Northwest National Laboratory
Jarek Nieplocha , Pacific Northwest National Laboratory
Manoj Krishnan , Pacific Northwest National Laboratory
pp. 28-35

Achieving High Performance to Support Multicast Traffic in a Parallel Packet Switch with Space Division Multiplexing Expansion (Abstract)

Ming Lei , PLA University of Science and Technology, China
Yusong Lin , National Digital Switching System Engineering & Technological R&D Center, China
Ximing Hu , National Digital Switching System Engineering & Technological R&D Center, China
Binqiang Wang , National Digital Switching System Engineering & Technological R&D Center, China
pp. 36-44
Session 2: Algorithms (1)

Efficient Subtorus Processor Allocation in a Multi-Dimensional Torus (Abstract)

Weizhen Mao , College of William and Mary Williamsburg, VA
William III Watson , Jefferson Lab Newport News, VA
Jie Chen , Jefferson Lab Newport News, VA
pp. 53-60

The Linear Layout of the Incomplete Hypercube (Abstract)

Kuan-Chou Lai , National Taichung University, Taichung, Taiwan
Ching-Chi Kao , St. John's University, Taipei, Taiwan
Jywe-Fei Fang , National Taichung University, Taichung, Taiwan
pp. 61-66

Parallel Branch-and-Bound Algorithm for Constructing Evolutionary Trees from Distance Matrix (Abstract)

Chun-Yuan Lin , National Tsing Hua University, China
Jiayi Zhou , Chung Hua University, China
Chuan Yi Tang , National Tsing Hua University, China
Kun-Ming Yu , Chung Hua University, China
pp. 66-72

Discrete Optimization Problems - Some New Heuristic Approaches (Abstract)

Boris Melnikov , Russia, Togliatti State University
pp. 73-82
Session 3: Algorithms (2)

Parallel 3-Dimensional DCT Computation on k-Ary n-Cubes (Abstract)

Mehdi Modarressi , Sharif University of Technology, Iran
Hamid Sarbazi-Azad , Sharif University of Technology, Iran
pp. 91-97

Fracture Analysis Using Reconfigurable Computing Systems (Abstract)

A. P. Kumbhar , Scientific and Engineering Computing Group, India
M. S. Shah , Scientific and Engineering Computing Group, India
pp. 98-104

Design and Evaluation of Dynamic Key Message Algorithms for Cluster Computing (Abstract)

Meng Ding , University of Alberta, Canada
Yang Wang , University of Albertam, Canada
Ming Zhu , Oracle Corporation, Redwood City, CA
Zhuang Guo , University of Alberta, Canada
pp. 105-112

Congestion Management of Self Similar IP Traffic - Weighted Probability Normal and Exponential RED (Abstract)

S Suresh. , University of South Australia
Ozdemir Gol , University of South Australia
pp. 113-122
Session 4: Applications (1)

Applying Web Service and Windows Clustering for High Volume Risk Analysis (Abstract)

Theewara Vorakosit , Kasetsart University, Thailand
Thanapol Rojanapanpat , Kasetsart University, Thailand
Putchong Uthayopas , Kasetsart University, Thailand
Juta Pichitlamken , Kasetsart University, Thailand
Sivadon Chaisiri , Kasetsart University, Thailand
Suphachan Phakhawirotkul , Kasetsart University, Thailand
pp. 131-138

Data production models for the CDF experiment (Abstract)

K. Genser , K. Genser
A. Robson , A. Robson
E. Vataga , E. Vataga
P. Yeh , P. Yeh
J. Syu , J. Syu
B. Cooper , B. Cooper
S.C. Timm , S.C. Timm
Y.C. Chen , Y.C. Chen
S. Cabrera , S. Cabrera
T. Tomura , T. Tomura
B. Jayatilaka , B. Jayatilaka
T.L. Hsieh , T.L. Hsieh
M. Coca , M. Coca
A.C. Kraan , A.C. Kraan
B. Stelzer , B. Stelzer
J. Antos , J. Antos
A.W. Chan , A.W. Chan
S.A. Wolbers , S.A. Wolbers
K. Hatakeyama , K. Hatakeyama
P.K. Teng , P.K. Teng
M. Babik , M. Babik
R. Lysak , R. Lysak
M. Siket , M. Siket
D. Benjamin , D. Benjamin
I.V. Mandrichenko , I.V. Mandrichenko
S. Hou , S. Hou
pp. 139-145

Parallel molecular dynamics simulation in NPT ensemble and its application to general anesthesia (Abstract)

Kwang Jin Oh , Korea Institute of Science and Technology, Korea
Michael L. Klein , University of Pennsylvania
pp. 146-152

High Performance Computing of Compressible Flows (Abstract)

Marvin D. Watts , Marvin D. Watts
Shahrouz Aliabadi , Shahrouz Aliabadi
Shuangzhang Tu , Shuangzhang Tu
pp. 153-160
Session 5: Applications (2)

Three-dimensional Computational Mechanical Analysis for 3-layered Aortic Arch Model under Steady and Unsteady Flow with Fluid-structure Interactions (Abstract)

Feng Gao , Graduate School of Information Science, Japan
Teruo Matsuzawa , Japan Advanced Institute of Science and Technology
Masahiro Watanabe , Japan Advanced Institute of Science and Technology
pp. 161-169

To Accelerate Multiple Sequence Alignment using FPGAs (Abstract)

Bu Dongbo , Chinese Academy of Science, Beijing, China
Sun Ninghui , Chinese Academy of Science, Beijing, China
Xu Lin , Graduate School of Chinese Academy of Science Beijing, China
Zhang Peiheng , Chinese Academy of Science, Beijing, China
Feng Shengzhong , Chinese Academy of Science, Beijing, China
pp. 176-180

Road Situation Modeling and Parallel Algorithm Implementation with FCD Based on Principle Curves (Abstract)

Zhaohui Zhang , Tongji University, Shanghai
Yu Fang , Tongji University, Shanghai
Changjun Jiang , Tongji University, Shanghai
pp. 181-186

3-D Seismic Imaging using High-performance Parallel Direct Solver for Large-scale Finite Element Analysis (Abstract)

Changsoo Shin , National University, Korea
Dongwoo Yang , National University, Korea
Jeong Ho Kim , KISTI, Korea
pp. 187-194
Session 6: Software (1)

LAPACK in SILC: Use of a Flexible Application Framework for Matrix Computation Libraries (Abstract)

Tamito KAJIYAMA , JST CREST and the University of Tokyo
Akira NISHIDA , University of Tokyo and JST CREST
Akira NUKADA , JST CREST and the University of Tokyo
pp. 205-212

Parallel Matrix Distribution Library for Sparse Matrix Solvers (Abstract)

Akira Nishida , University of Tokyo and CREST, JST
Reiji Suda , University of Tokyo and CREST, JST
Akihiro Fujii , Kogakuin University and CREST, JST
pp. 213-219

High Performance Sockets over Kernel Level Virtual Interface Architecture (Abstract)

Ninghui Sun , Institute of Computing Technology, Chinese Academy of Sciences, China
Zhigang Huo , Graduate School of Chinese Academy of Sciences, China
Yansong Yu , Graduate School of Chinese Academy of Sciences, China
pp. 220-226

On the Benefits of aWorkflow-Aware File System in High-Performance Computing Systems (Abstract)

Paul Lu , University of Alberta, Canada
Yang Wang , University of Alberta, Canada
pp. 227-234

PWP: a Cluster Web Portal based on MVC (Abstract)

Jianfeng Zhan , Institute of Computing Technology, Chinese Academy of Sciences, China
Yan Hao , Graduate School of the Chinese Academy of Sciences, China
Dan Meng , Institute of Computing Technology, Chinese Academy of Sciences, China
Bibo Tu , Graduate School of the Chinese Academy of Sciences, China
pp. 235-239

A Storage Space Management Policy for a Cluster File System (Abstract)

Rongfeng Tang , Graduate School of Chinese Academy of Sciences, China
Ninghui Sun , Institute of Computing Technology, Chinese Academy of Sciences, China
Zhihua Fan , Graduate School of Chinese Academy of Sciences, China
Dan Meng , Institute of Computing Technology, Chinese Academy of Sciences, China
Hui Li , Graduate School of Chinese Academy of Sciences, China
Jin Xiong , Graduate School of Chinese Academy of Sciences, China
Jie Ma , Institute of Computing Technology, Chinese Academy of Sciences, China
pp. 240-248
Session 7: Performance Modeling and Evaluation

Performance Comparison of Adaptive Routing Algorithms in the Star Network (Abstract)

Hamid Sarbazi-Azad , IPM School of Computer Science and Sharif University, Iran
Mustafa S. Rezazad , IPM School of Computer Science , Iran
Abbas Eslami Kiasari , IPM School of Computer Science, Iran
pp. 257-264

Performance Modelling and Analysis of Pipelined Circuit Switching in Hypercubes with Faults (Abstract)

F. Safaei , Institute for Studies in Theoretical Physics and Mathematics (IPM), Iran
M. Ould-Khaoua , Dept. of Computing Science, University of Glasgow, UK.
A. Khonsari , Dept. of Electrical and Computer Engineering University of Tehran, Iran.
M. Fathy , Dept. of Ccomputer Engineering, Iran Univ. of Science and Technology, Iran.
pp. 265-272

A Trace-Driven Analysis of Parallel Prefetching Algorithms for Parallel and Distributed Systems (Abstract)

Changsheng Xie , Huazhong University of Science and Technology, China
CaiBin CaiBin , Huazhong University of Science and Technology, China
Diqing Hu , Huazhong University of Science and Technology, China
pp. 273-280

Reduction Transformations for Optimization Parameter Selection (Abstract)

Xiaomei Li , National Lab for Parallel and Distributed Processing, Changsha, China
Zhenghua Wang , National Lab for Parallel and Distributed Processing, Changsha, China
Yonggang Che , National Lab for Parallel and Distributed Processing, Changsha, China
pp. 281-288

Integration of Parallel MM5 Distributed Resources Manger and Performance Evaluation (Abstract)

Liang Peng , Sun Microsystem Inc, Nanyang Technological University
Melvin Koh , Sun Microsystem Inc, Nanyang Technological University
Simon See , Sun Microsystem Inc, Nanyang Technological University
pp. 289-298
Session 8: Grid Computing (1)

Operating System Level Support for Resource Sharing Across Multiple Domains (Abstract)

Li Cha , Institute of Computing Technology of Chinese Academy of Sciences, Beijing, China
Wei Li , Institute of Computing Technology of Chinese Academy of Sciences, Beijing, China
Haiyan Yu , Institute of Computing Technology of Chinese Academy of Sciences, Beijing, China
Zhiwei Xu , Institute of Computing Technology of Chinese Academy of Sciences, Beijing, China
Hao Wang , Institute of Computing Technology of Chinese Academy of Sciences, Beijing, China
Donghua Liu , Institute of Computing Technology of Chinese Academy of Sciences, Beijing, China
pp. 299-306

Design and Implementation of Condor-UNICORE Bridge (Abstract)

Hidemoto Nakada , AIST, Tsukuba, Japan
Yasumasa Nakano , Fujitsu Limited, Japan
Motohiro Yamada , Fujitsu Limited, Chiba City, Japan
Satoshi Matsuoka , Tokyo Institute of Technology, Japan
Jaime Frey , University of Wisconsin
Yasuyoshi Itou , Fujitsu Limited, Chiba City, Japan
pp. 307-314

Addressing Sporadic Contention on Shared Computing Clusters (Abstract)

Percival Xavier , Nanyang Technological University, Singapore
Wentong Cai , Nanyang Technological University, Singapore
Bu-Sung Lee , Nanyang Technological University, Singapore
pp. 323-330

Implementation of Parallel Plasma Particle-In-Cell Codes on SuperSINET based Grid (Abstract)

Dongsheng Cai , University of Tsukuba, Japan
Weifeng Tao , University of Tsukuba, Japan
pp. 331-338
Session 9: Grid Computing (2)

Preliminary Study of A Task Farming API over The GridRPC Framework (Abstract)

Hidemoto Nakada , National Institute of Advanced Industrial Science and Technology, Japan
Yusuke Tanimura , National Institute of Advanced Industrial Science and Technology, Japan
Yoshio Tanaka , National Institute of Advanced Industrial Science and Technology, Japan
Satoshi Sekiguchi , National Institute of Advanced Industrial Science and Technology, Japan
pp. 339-345

Self-Organizing Communication-aware Resource Management for Scheduling in Grid Environment (Abstract)

Yuzhong Sun , Institute of Computing Technology, Chinese Academy of Sciences, China
Qinghua Zheng , Graduate School of the Chinese Academy of Sciences, China
Haijun Yang , Institute of Computing Technology, Chinese Academy of Sciences, China
pp. 346-353

Towards a Peer-To-Peer Platform for High Performance Computing (Abstract)

Regis Boesch , University of Applied Sciences, Western Switzerland
Nabil Abdennadher , University of Applied Sciences, Western Switzerland
pp. 354-361

A Grid Resource Management Approach Based on P2P Technology (Abstract)

Shudong Chen , Shanghai Jiao Tong University, China
Fanyuan Ma , Shanghai Jiao Tong University, China
Jianhua Shen , Chinese Academy of Sciences, China
Xuefeng Du , Shanghai Jiao Tong University, China
pp. 362-369

GiSK: Making Secure, Reliable and Scalable VO Repository Virtualizing Generic Disks in the Grid (Abstract)

Hyeong S. Kim , Seoul National University Seoul, Korea
Eunsung Kim , Seoul National University Seoul, Korea
Jongsook Lee , Korea Institute of Science and Technology Information Daejeon, Korea
Heon Y. Yeom , Seoul National University Seoul, Korea
pp. 370-377

Protocol transparent application framework for Grid (Abstract)

Jysoo Lee , 2Supercomputing Center, KISTI, Daejon, S. Korea
Jaeyoung Choi , School of Computing, Soongsil University, S. Korea
Sungju Kwon , School of Computing, Soongsil University, S. Korea
pp. 378-386
Session 10: Software (2)

The Cluster Monitoring & Controlling Method with Scalable Communication Framework (Abstract)

Changsung Lee , Samsung Advanced Institute of Technology
Doosik Park , Samsung Electronics CO., LTD.
Sang-Moon Lee , Samsung Electronics CO., LTD.
pp. 387-391

Adaptive Mechanisms for Managing the High Performance Web-based Applications (Abstract)

Ying Jiang , Graduate School of the Chinese Academy of Sciences, China
Dan Meng , Institute of Computing Technology, Chinese Academy of Sciences, China
Jianfeng Zhan , Institute of Computing Technology, Chinese Academy of Sciences, China
Danjun Liu , Graduate School of the Chinese Academy of Sciences, China
pp. 392-397

A Faster Checkpointing and Recovery Algorithm with a Hierarchical Storage Approach (Abstract)

Mingyu CHEN , Chinese Academy of Sciences
Wen GAO , Chinese Academy of Sciences
Takashi NANYA , University of Tokyo
pp. 398-402

Multithreading in the Kylin Operating System for High End Computing (Abstract)

Wu Qingbo , National University of Defense Technology,China
Zhang Yingxing , National University of Defense Technology,China
pp. 403-408

Research and Realization of Authentication Technique Based on OTP and Kerberos (Abstract)

Zhang Ming-quan , North China Electric Power University, Baoding
Feng Qi-yuan , North China Electric Power University, Baoding
Cheng `Xiao-rong , North China Electric Power University, Baoding
Dong Chao , North China Electric Power University, Baoding
pp. 409-416
Session 11: Applications and Performance Evaluation

A Simple, Fast Parallel Implementation of GRAPES 3DVAR (Abstract)

Junqiang Song , National University of Defense Technology, China
Yongtao Yang , National University of Defense Technology, China
Lingmei Kong , National University of Defense Technology, China
Xiaoqian Zhu , National University of Defense Technology, China
pp. 417-421

Test of Iterative Solvers on ITBL (Abstract)

Hidehiko Hasegawa , University of Tsukuba
pp. 422-425

Parallel Multiple Sequences Alignment in SMP Cluster (Abstract)

Ninghui Sun , Institute of Computing Technology, Chinese Academy of Sciences
Guangming Tan , Graduate School of Chinese Academy of Sciences
Shengzhong Feng , Institute of Computing Technology, Chinese Academy of Sciences
pp. 426-431

Performance Evaluation of a Parallel Iterative Method Library using OpenMP (Abstract)

Hisashi Kotakemori , JST CREST and University of Toky
Hidehiko Hasegawa , University of Tsukuba and JST CREST
pp. 432-436

Performance Evaluation of Allgather Algorithms On Terascale Linux Cluster with Fast Ethernet (Abstract)

Wei Yuan , Chinese Academy of Science
Yunquan Zhang , Chinese Academy of Science
Jing Chen , Chinese Academy of Science
Linbo Zhang , Chinese Academy of Science
pp. 437-442

Comprehensive Evaluation of the Cutting Performance of Sugarcane Harvester Based on Fuzzy Theory and Neural Network (Abstract)

Li Shangping , Guangxi Engineering Institute,Liuzhou, China.
Hu Shanshan , Guangxi University, Nanning, China
Song Rongrong , Guangxi University, Nanning, China
He Yulin , Chongqing University, Chongqing, China
Ma Fanglan , Chongqing University, China
pp. 443-450
Session 12: Algorithms (3)

Paralleled Two-Pass Hexagonal Algorithm for Motion Estimation (Abstract)

Graham Megson , Reading University, Reading, UK
Yunsong Wu , Jiangxi Science and Technology Normal University, China
pp. 451-456

Optimal Multi-installments Algorithm for Divisible Load Scheduling (Abstract)

Shang Mingsheng , University of Electronic Science and Technology, China
Sun Shixin , University of Electronic Science and Technology, China
pp. 457-462

Using Packet Scheduling to Enhance I-Cache Behavior of Protocol Processing (Abstract)

Binxing Fang , Chinese Academy of Sciences
Li Guo , Chinese Academy of Sciences
Zhibin Zhang , Graduate School of the Chinese Academy of Sciences
pp. 463-468

Reconfigurable Consistency Algorithm (Abstract)

Christiane V. Pousa , Pontifical Catholic University of Minas Gerais - Belo Horizonte, Brazil
Carlos A. P. S. Martins , Pontifical Catholic University of Minas Gerais - Belo Horizonte, Brazil
Luis F. W. Goes , Pontifical Catholic University of Minas Gerais - Belo Horizonte, Brazil
pp. 473-478

A Novel Fuzzy Anomaly Detection Algorithm Based on Artificial Immune System (Abstract)

Wang Li , Huazhong University of Science and Technology, Hubei, China
Li Yao , Huazhong University of Science and Technology, Hubei, China
Li Zhi-tang , Huazhong University of Science and Technology, Hubei, China
pp. 479-486
Session 13: System Architecture and Models (2)

An Efficient Way of Passing of Data in a Multithreaded Scheduled Dataflow Architecture (Abstract)

Janjr Li , Fu Jen Catholic University, Hsin Chuang , Taipei, Taiwan.
Joseph M. Arul , Fu Jen Catholic University, Hsin Chuang , Taipei, Taiwan.
Tsozen Yeh , Fu Jen Catholic University, Hsin Chuang , Taipei, Taiwan.
Chiacheng Hsu , Fu Jen Catholic University, Hsin Chuang , Taipei, Taiwan.
pp. 487-492

The RTCC-pyramid: A Versatile Pyramid network (Abstract)

M. Hoseiny Farahabady , IPM School of Computer Science, Tehran, Iran.
H. Sarbazi-Azad , Sharif Uni. of Technology, Tehran, Iran
pp. 493-498

Hypercube and Its Variant Networks: A Topological Evaluation (Abstract)

N. Chalamaiah , Computer Science,J.N.T.University
M.Venkata Rao , Dept.of Computer Science, Gudlavalleru Engg.College
pp. 499-504

VOIQ: A Practical High-Performance Architecture for the Implementation of Single-Buffered Routers (Abstract)

Jing Qu , National Digital Switching System Engineering and Technological R&D Center
Ximing Hu , Air Force Engineering University, China
Yinhai Li , National Digital Switching System Engineering and Technological R&D Center
Binqiang Wang , National Digital Switching System Engineering and Technological R&D Center
pp. 505-512
Session 14: System Architecture and Models (3)

Queue Usage and Memory-Level Parallelism Sensitive Scheduling (Abstract)

Feng Xiaobing , Institute of computing technology of Chinese Academy of Science
Liu Zhanglin , Institute of computing technology of Chinese Academy of Science
Zhang Zhaoqing , Institute of computing technology of Chinese Academy of Science
pp. 513-518

An Instruction Fetch Policy Handling L2 Cache Misses in SMT Processors (Abstract)

Minxuan Zhang , National University of Defense Technology, China
Caixia Sun , National University of Defense Technology, China
Hongwei Tang , National University of Defense Technology, China
pp. 519-525

Revised Stride Data Value Predictor Design (Abstract)

Zhou Xingming , National Laboratory for Parallel and Distributed Processing, Changsha, China
Yang Yanping , National Laboratory for Parallel and Distributed Processing, Changsha, China
Xiao Yong , National Laboratory for Parallel and Distributed Processing, Changsha, China
pp. 526-531

OMFS: An Object-Oriented Multimedia File System for Cluster Streaming Server (Abstract)

Hai Jin , Huazhong University of Science and Technology, Wuhan, China
Quan Yuan , Huazhong University of Science and Technology, Wuhan, China
Bin Cheng , Huazhong University of Science and Technology, Wuhan, China
pp. 532-537

A Reconfigurable MPI Broadcast Function (Abstract)

Luiz E. S. Ramos , Rutgers University
Carlos A. P. S. Martin , Pontificial Catholic University of Minas Gerais
pp. 538-543

Research on DNA Computer with Coprocessor Organizational Model (Abstract)

Wang Zhiwu , Huazhong University of Science and Technology, Wuhan, China
Cui Guangzhao , Huazhong University of Science and Technology, Wuhan, China
Wang Yanfeng , Huazhong University of Science and Technology, Wuhan, China
pp. 544-552
Session 15: Grid Computing (3)

YellowRiver: A Flexible High Performance Cluster Computing Service for Grid (Abstract)

Liang Peng , Asia Pacific, Sun Microsystems Inc., Nanyang Technological University
Simon See , Asia Pacific, Sun Microsystems Inc., Nanyang Technological University
Lip Kian Ng , Asia Pacific, Sun Microsystems Inc., Nanyang Technological University
pp. 553-558

An Information Sharing and Analysis Method for Dtection of Abnormal Behavior in Computational Grids (Abstract)

Y. Saeki , Center for Grid Research and Development, National Institute of Informatics, Japan
S. Shimojo , Osaka University, Japan
M. Kanamori , Center for Grid Research and Development, National Institute of Informatics, Japan
pp. 559-563

A Scheduling Algorithm Aimed at Time and Cost for Meta-tasks in Grid Computing Using Fuzzy Applicability (Abstract)

HU Zhigang , Central South University, Changsha, China
HU Rong , Central South University, Changsha, China
pp. 564-569

Network-attached Smart Peripheral for Loosely Coupled Grid Computer (Abstract)

Fan Jianping , Institute of Computing Technology, Chinese Academy of Sciences
Zhang Yuedong , Institute of Computing Technology, Chinese Academy of Sciences
Sun Yuzhong , Institute of Computing Technology, Chinese Academy of Sciences
Yang Yi , Institute of Computing Technology, Chinese Academy of Sciences
pp. 570-575

A Grid-distance Based Scheduling for Grid Resource Management (Abstract)

Shuyu Li , Northwestern Polytechnical University, Xi?an, Shaanxi, China
Jian WU , Northwestern Polytechnical University, Xi?an, Shaanxi, China
Dingjian CHEN , Northwestern Polytechnical University, Xi?an, Shaanxi, China
Manfu MA , Northwestern Polytechnical University, Xi?an, Shaanxi, China
Zhengguo HU , Northwestern Polytechnical University, Xi?an, Shaanxi, China
pp. 576-581

A Model of Intelligent Distributed Medical Diagnosis and Therapy System Based on Mobile Agent and Ontology (Abstract)

Jin Hui , Computer School of Wuhan University, China
Wu Zhao , Xiangfan University, Xiangfan, China
He Yanxiang , Computer School of Wuhan University, China
pp. 582-587

A Heuristic Scheduling Strategy for Independent Tasks on Grid (Abstract)

Jiang Changjun , Tongji University, Shanghai, China
Ni Lina , Tongji University, Shanghai, China
Zhang Jinquan , Tongji University, Shanghai, China
pp. 588-593

GlobalStat: A Statistics Service for Diverse Data Collaboration and Integration in Grid (Abstract)

Zhihui Du , Tsinghua University, Beijing, China
Shaomei Wu , Tsinghua University, Beijing, China
pp. 594-602
WS: Workshop on Bioinformatics and Computational Biology

Report about VOCs Dataset's Analysis based on randomForests Method (Abstract)

Fred Hamprecht , IWR, Heidelberg University, Germany
Zhang Huaizhong , Nanjing Normal University Nanjing, China
Anton Amann , Universitatsklinik Anasthesie, Leopold-Franzens-Universitat, Austria
pp. 603-607

ClustalY: Speed Up the Guide Tree Building for ClustalW (Abstract)

Huan Yu , School of Mathematical Sciences, Peking University, Beijing, China
Minghua Deng , Center for Theoretical Biology, Peking University, Beijing, China
pp. 608-610

Missing Value Estimation For Microarray Data Based On Fuzzy C-means Clustering (Abstract)

JiaWei Luo , Hunan University, Changsha , China
Tao Yang , Hunan University, Changsha , China
Yan Wang , Hunan University, Changsha , China
pp. 611-616

Nearest Neighbor Algorithm for Prediction of Protein Domain Structural Class (Abstract)

Zheng-Hua Wang , National University of Defense Technology, Changsha, China
Zhen-Hui Zhang , National University of Defense Technology, Changsha, China
Yong-Xian Wang , National University of Defense Technology, Changsha, China
pp. 617-620

Parallel Implementation of Stochastic Simulation for Large-scale Cellular Processes (Abstract)

Tianhai Tian , University of Queensland, Brisbane , Australia
Kevin Burrage , University of Queensland, Brisbane , Australia
pp. 621-626

Biclustering of Gene Expression Data by Simulated Annealing (Abstract)

Anupam Chakraborty , Indian Institute of Technology Kharagpur, India
pp. 627-632

ICA Based Supervised Gene Classification of Microarray Data in Yeast Functional Genome (Abstract)

Lu Xin-guo , Hunan University, Changsha, China
Zhou Si-Wang , Hunan University, Changsha, China
Yue Wen , Hunan University, Changsha, China
Lin Ya-ping , Hunan University, Changsha, China
Wang Hai-jun , Hunan University, Changsha, China
pp. 633-638

Towards a Weighted-Tree Similarity Algorithm for RNA Secondary Structure Comparison (Abstract)

Virendra C. Bhavsar , University of New Brunswick, Fredericton, Canada
Jing Jin , University of New Brunswick, Fredericton, Canada
Biplab K. Sarker , University of New Brunswick, Fredericton, Canada
Harold Boley , National Research Council of Canada, Fredericton, New Brunswick, Canada
Lu Yang , University of New Brunswick, Fredericton, Canada
pp. 639-644

Clustering Orthologs Based on Sequence and Domain Similarities (Abstract)

Hatice Ozer , Ohio State University
ShengZhong Feng , Chinese Academy of Sciences, China
Bo Yuan , Ohio State University
Fa Zhang , Ohio State University
pp. 645-651

Gene Cluster Algorithm Based on Most Similarity Tree (Abstract)

Li Xiao-long , Hunan University, Changsha, China
Yi Ye-qing , Hunan University, Changsha, China
Wang Hai-jun , Hunan University, Changsha, China
Lin Ya-ping , Hunan University, Changsha, China
Lu Xin-guo , Hunan University, Changsha, China
Cai li-jun , Hunan University, Changsha, China
pp. 652-656
Author Index

Author Index (PDF)

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