The Community for Technology Leaders
2012 IEEE 8th International Conference on E-Science (2012)
Chicago, IL, USA USA
Oct. 8, 2012 to Oct. 12, 2012
ISBN: 978-1-4673-4467-8
TABLE OF CONTENTS
Papers

Author index (Abstract)

pp. 1-25

Table of contents (Abstract)

pp. 1-7

Committees (Abstract)

pp. 1-6

Sponsors (Abstract)

pp. 1-2

RightField: Semantic enrichment of Systems Biology data using spreadsheets (Abstract)

Katherine Wolstencroft , School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, UK
Stuart Owen , School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, UK
Carole Goble , School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, UK
Quyen Nguyen , Heidelberg Institute of Theoretical Studies gGmbH, Schloß-Wolfsbrunnenweg 35, 69118 Heidelberg, Germany
Olga Krebs , Heidelberg Institute of Theoretical Studies gGmbH, Schloß-Wolfsbrunnenweg 35, 69118 Heidelberg, Germany
Wolfgang Muller , Heidelberg Institute of Theoretical Studies gGmbH, Schloß-Wolfsbrunnenweg 35, 69118 Heidelberg, Germany
pp. 1-8

Virtual Simulation Objects concept as a framework for system-level simulation (Abstract)

Sergey V. Kovalchuk , e-Science Research Institute, National Research University of IT, Mechanics and Optics, St. Petersburg, Russia
Pavel A. Smirnov , e-Science Research Institute, National Research University of IT, Mechanics and Optics, St. Petersburg, Russia
Sergey S. Kosukhin , e-Science Research Institute, National Research University of IT, Mechanics and Optics, St. Petersburg, Russia
Alexander V. Boukhanovsky , e-Science Research Institute, National Research University of IT, Mechanics and Optics, St. Petersburg, Russia
pp. 1-8

A simulator for social exchanges and collaborations — Architecture and case study (Abstract)

Christian Haas , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
Simon Caton , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
Daniel Trumpp , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
Christof Weinhardt , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
pp. 1-8

Towards next generations of software for distributed infrastructures: The European Middleware Initiative (Abstract)

Cristina Aiftimiei , National Institute of Nuclear Physics, INFN
Alberto Aimar , European Center for Nuclear Research, CERN
Andrea Ceccanti , National Institute of Nuclear Physics, INFN
Marco Cecchi , National Institute of Nuclear Physics, INFN
Alberto Di Meglio , European Center for Nuclear Research, CERN
Florida Estrella , European Center for Nuclear Research, CERN
Patrick Fuhrmam , German Electron Synchrotron, DESY
Emidio Giorgio , National Institute of Nuclear Physics, INFN
Balazs Konya , Institute of Physics, Lund University
Laurence Field , European Center for Nuclear Research, CERN
Jon Kerr Nilsen , Department of Physics, University of Oslo
Morris Riedel , Juelich Supercomputing Centre, FZJ
John White , Helsinki Institute of Physics
pp. 1-10

Prediction of protein solubility in E. coli (Abstract)

Taghrid Samak , Lawrence Berkeley National Laboratory, Berkeley, CA
Dan Gunter , Lawrence Berkeley National Laboratory, Berkeley, CA
Zhong Wang , Lawrence Berkeley National Laboratory, Berkeley, CA
pp. 1-8

Quality of data driven simulation workflows (Abstract)

Michael Reiter , Institute of Architecture of Application Systems (IAAS), University of Stuttgart
Uwe Breitenbucher , Institute of Architecture of Application Systems (IAAS), University of Stuttgart
Oliver Kopp , Institute of Architecture of Application Systems (IAAS), University of Stuttgart
Dimka Karastoyanova , Institute of Architecture of Application Systems (IAAS), University of Stuttgart
pp. 1-8

Mining hidden mixture context with ADIOS-P to improve predictive pre-fetcher accuracy (Abstract)

Jong Youl Choi , Scientific Data Group, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
Hasan Abbasi , Scientific Data Group, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
David Pugmire , Scientific Data Group, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
Norbert Podhorszki , Scientific Data Group, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
Scott Klasky , Scientific Data Group, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
Cristian Capdevila , Electrical Engineering and Computer Science, The University of Tennessee, Knoxville, Tennessee, USA
Manish Parashar , Electrical and Computer Engineering, Rutgers University, Piscataway, New Jersey, USA
Matthew Wolf , School of Computer Science, Georgia Institute of Technology, Atlanta, Georgia, USA
Judy Qiu , School of Informatics and Computing, Indiana University, Bloomington, Indiana, USA
Geoffrey Fox , School of Informatics and Computing, Indiana University, Bloomington, Indiana, USA
pp. 1-8

Scientific workflow rewriting while preserving provenance (Abstract)

Sarah Cohen-Boulakia , Laboratoire de Recherche en Informatique, CNRS UMR 8623, Université Paris Sud, AMIB Group, INRIA Saclay, France
Christine Froidevaux , Laboratoire de Recherche en Informatique, CNRS UMR 8623, Université Paris Sud, AMIB Group, INRIA Saclay, France
Jiuqiang Chen , Laboratoire de Recherche en Informatique, CNRS UMR 8623, Université Paris Sud, AMIB Group, INRIA Saclay, France
pp. 1-9

Calibration of watershed models using cloud computing (Abstract)

Marty Humphrey , Department of Computer Science, University of Virginia, Charlottesville, VA 22904
Norm Beekwilder , Department of Computer Science, University of Virginia, Charlottesville, VA 22904
Jonathan L. Goodall , Department of Civil and Environmental Engineering, University of South Carolina, Columbia, SC 29208
Mehmet B. Ercan , Department of Civil and Environmental Engineering, University of South Carolina, Columbia, SC 29208
pp. 1-8

Statistical analysis and visualization services for Spatially Integrated Social Science datasets (Abstract)

Irfan Azeezullah , eResearch Lab, School of ITEE, The University of Queensland, Brisbane, Australia
Friska Pambudi , eResearch Lab, School of ITEE, The University of Queensland, Brisbane, Australia
Tung-Kai Shyy , eResearch Lab, School of ITEE, The University of Queensland, Brisbane, Australia
Imran Azeezullah , eResearch Lab, School of ITEE, The University of Queensland, Brisbane, Australia
Nigel Ward , eResearch Lab, School of ITEE, The University of Queensland, Brisbane, Australia
Jane Hunter , eResearch Lab, School of ITEE, The University of Queensland, Brisbane, Australia
Robert J. Stimson , Director of AURIN (Australian Urban Research Infrastructure Network), The University of Melbourne, Melbourne, Australia
pp. 1-8

CINET: A cyberinfrastructure for network science (Abstract)

Sherif Elmeligy Abdelhamid , Virginia Tech, Blacksburg, VA
Richard Alo , University of Houston, Houston, TX
S. M. Arifuzzaman , Virginia Tech, Blacksburg, VA
Pete Beckman , Argonne National Laboratory, Chicago, IL
Md Hasanuzzaman Bhuiyan , Virginia Tech, Blacksburg, VA
Keith Bisset , Virginia Tech, Blacksburg, VA
Edward A. Fox , Virginia Tech, Blacksburg, VA
Geoffrey C. Fox , Indiana University, Bloomington, IN
Kevin Hall , Virginia Tech, Blacksburg, VA
S. M. Shamimul Hasan , Virginia Tech, Blacksburg, VA
Anurodh Joshi , Virginia Tech, Blacksburg, VA
Maleq Khan , Virginia Tech, Blacksburg, VA
Chris J. Kuhlman , Virginia Tech, Blacksburg, VA
Spencer Lee , Virginia Tech, Blacksburg, VA
Jonathan P. Leidig , Virginia Tech, Blacksburg, VA
Hemanth Makkapati , Virginia Tech, Blacksburg, VA
Madhav V. Marathe , Virginia Tech, Blacksburg, VA
Henning S. Mortveit , Virginia Tech, Blacksburg, VA
Judy Qiu , Indiana University, Bloomington, IN
S. S. Ravi , University at Albany, SUNY, Albany, NY
Zalia Shams , Virginia Tech, Blacksburg, VA
Ongard Sirisaengtaksin , University of Houston, Houston, TX
Rajesh Subbiah , Virginia Tech, Blacksburg, VA
Samarth Swarup , Virginia Tech, Blacksburg, VA
Nick Trebon , Argonne National Laboratory, Chicago, IL
Anil Vullikanti , Virginia Tech, Blacksburg, VA
Zhao Zhao , Virginia Tech, Blacksburg, VA
pp. 1-8

P∗: A model of pilot-abstractions (Abstract)

Andre Luckow , Rutgers University, Piscataway, NJ 08854, USA
Mark Santcroos , Bioinformatics Laboratory, Academic Medical Center, University of Amsterdam, The Netherlands
Andre Merzky , Center for Computation & Technology, Louisiana State University, USA
Ole Weidner , Rutgers University, Piscataway, NJ 08854, USA
Pradeep Mantha , Center for Computation & Technology, Louisiana State University, USA
Shantenu Jha , Rutgers University, Piscataway, NJ 08854, USA
pp. 1-10

BIGS: A framework for large-scale image processing and analysis over distributed and heterogeneous computing resources (Abstract)

Raul Ramos-Pollan , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Fabio A. Gonzalez , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Juan C. Caicedo , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Angel Cruz-Roa , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Jorge E. Camargo , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Jorge A. Vanegas , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Santiago A. Perez , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Jose David Bermeo , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Juan Sebastian Otalora , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
Paola K. Rozo , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
John E. Arevalo , Bioingenium Research Group at Universidad Nacional de Colombia, Bogotá, Colombia
pp. 1-8

An integrated science portal for collaborative compute and data intensive protein structure studies (Abstract)

Ian Stokes-Rees , Harvard Medical School Boston, USA
Daniel O'Donovan , Harvard Medical School Boston, USA
Peter Doherty , Harvard Medical School Boston, USA
Meghan Porter-Mahoney , Harvard Medical School Boston, USA
Piotr Sliz , Harvard Medical School Boston, USA
pp. 1-8

Integration of modern data management practice with scientific workflows (Abstract)

Neil E. B. Killeen , Centre for Neuroscience Research, University of Melbourne, Victoria, Australia
Jason M. Lohrey , Arcitecta Pty. Ltd, Victoria, Australia
Michael Farrell , Florey Neuroscience Institutes, Melbourne, Victoria, Australia
Wilson Liu , Centre for Neuroscience Research, University of Melbourne, Victoria, Australia
Slavisa Garic , Faculty of Information Technology, Monash University, Clayton, 3800, Victoria, Australia
David Abramson , Faculty of Information Technology, Monash University, Clayton, 3800, Victoria, Australia
Hoang Nguyen , Faculty of Information Technology, Monash University, Clayton, 3800, Victoria, Australia
Gary Egan , Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, 3800, Victoria, Australia
pp. 1-8

Common motifs in scientific workflows: An empirical analysis (Abstract)

Daniel Garijo , Ontology Engineering Group, Universidad Politecnica de Madrid
Pinar Alper , School of Computer Science, University of Manchester
Khalid Belhajjame , School of Computer Science, University of Manchester
Oscar Corcho , Ontology Engineering Group, Universidad Politecnica de Madrid
Yolanda Gil , Information Sciences Institute, Department of Computer Science, University of Southern California
Carole Goble , School of Computer Science, University of Manchester
pp. 1-8

WorkWays: Interactive workflow-based science gateways (Abstract)

Hoang Nguyen , Faculty of Information Technology, Monash University Clayton 3800, Victoria, Australia
David Abramson , Faculty of Information Technology, Monash University Clayton 3800, Victoria, Australia
pp. 1-8

Folding proteins at 500 ns/hour with Work Queue (Abstract)

Badi' Abdul-Wahid , University of Notre Dame, Notre Dame, IN 46656
Li Yu , University of Notre Dame, Notre Dame, IN 46656
Dinesh Rajan , University of Notre Dame, Notre Dame, IN 46656
Haoyun Feng , University of Notre Dame, Notre Dame, IN 46656
Eric Darve , Stanford University, 450 Serra Mall, Stanford, CA 94305
Douglas Thain , University of Notre Dame, Notre Dame, IN 46656
Jesus A. Izaguirre , University of Notre Dame, Notre Dame, IN 46656
pp. 1-8

WorkflowSim: A toolkit for simulating scientific workflows in distributed environments (Abstract)

Weiwei Chen , Information Sciences Institute, University of Southern California, Marina del Rey, CA, USA
Ewa Deelman , Information Sciences Institute, University of Southern California, Marina del Rey, CA, USA
pp. 1-8

Discovering drug targets for neglected diseases using a pharmacophylogenomic cloud workflow (Abstract)

Kary A. C. S. Ocana , Federal University of Rio de Janeiro - COPPE/UFRJ
Daniel de Oliveira , Federal University of Rio de Janeiro - COPPE/UFRJ
Jonas Dias , Federal University of Rio de Janeiro - COPPE/UFRJ
Marta Mattoso , Federal University of Rio de Janeiro - COPPE/UFRJ
pp. 1-8

MARISSA: MApReduce Implementation for Streaming Science Applications (Abstract)

E. Dede , SUNY Binghamton, Binghamton, NY 13902
Z. Fadika , SUNY Binghamton, Binghamton, NY 13902
J. Hartog , SUNY Binghamton, Binghamton, NY 13902
M. Govindaraju , SUNY Binghamton, Binghamton, NY 13902
L. Ramakrishnan , Lawrence Berekely National Lab, Berkeley, CA 94720
D. Gunter , Lawrence Berekely National Lab, Berkeley, CA 94720
R. Canon , Lawrence Berekely National Lab, Berkeley, CA 94720
pp. 1-8

A system for management of Computational Fluid Dynamics simulations for civil engineering (Abstract)

Peter Sempolinski , Computer Science and Engineering, University of Notre Dame
Douglas Thain , Computer Science and Engineering, University of Notre Dame
Daniel Wei , Civil & Environmental Engineering & Earth Sciences, University of Notre Dame
Ahsan Kareem , Civil & Environmental Engineering & Earth Sciences, University of Notre Dame
pp. 1-8

A framework to access handwritten information within large digitized paper collections (Abstract)

Liana Diesendruck , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Luigi Marini , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Rob Kooper , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Mayank Kejriwal , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Kenton McHenry , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
pp. 1-10

Service-based integration of human users in workflow-driven scientific experiments (Abstract)

Dimka Karastoyanova , Institute of Architecture of Application Systems (IAAS), University of Stuttgart, Stuttgart, Germany
Dimitrios Dentsas , Institute of Architecture of Application Systems (IAAS), University of Stuttgart, Stuttgart, Germany
David Schumm , Institute of Architecture of Application Systems (IAAS), University of Stuttgart, Stuttgart, Germany
Mirko Sonntag , Institute of Architecture of Application Systems (IAAS), University of Stuttgart, Stuttgart, Germany
Lina Sun , Institute of Architecture of Application Systems (IAAS), University of Stuttgart, Stuttgart, Germany
Karolina Vukojevic , Institute of Architecture of Application Systems (IAAS), University of Stuttgart, Stuttgart, Germany
pp. 1-8

Towards semantically-enabled exploration and analysis of environmental ecosystems (Abstract)

Ping Wang , Tetherless World Constellation, Rensselaer Polytechnic Institute, Troy, NY USA
Linyun Fu , Tetherless World Constellation, Rensselaer Polytechnic Institute, Troy, NY USA
Evan W. Patton , Tetherless World Constellation, Rensselaer Polytechnic Institute, Troy, NY USA
Deborah L. McGuinness , Tetherless World Constellation, Rensselaer Polytechnic Institute, Troy, NY USA
F. Joshua Dein , U.S. Geological Survey
R. Sky Bristol , U.S. Geological Survey
pp. 1-8

Flashes in a star stream: Automated classification of astronomical transient events (Abstract)

S. G. Djorgovski , California Institute of Technology, Pasadena, CA 91125, USA
A. A. Mahabal , California Institute of Technology, Pasadena, CA 91125, USA
C. Donalek , California Institute of Technology, Pasadena, CA 91125, USA
M. J. Graham , California Institute of Technology, Pasadena, CA 91125, USA
A. J. Drake , California Institute of Technology, Pasadena, CA 91125, USA
B. Moghaddam , Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109, USA
M. Turmon , Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109, USA
pp. 1-8

Remote phenology: Applying machine learning to detect phenological patterns in a cerrado savanna (Abstract)

Jurandy Almeida , RECOD Lab, Institute of Computing, University of Campinas - UNICAMP, 13083-852, Campinas, SP - Brazil
Jefersson A. dos Santos , RECOD Lab, Institute of Computing, University of Campinas - UNICAMP, 13083-852, Campinas, SP - Brazil
Bruna Alberton , Phenology Lab, Dept. of Botany, Sao Paulo State University - UNESP, 13506-900, Rio Claro, SP - Brazil
Ricardo da S. Torres , RECOD Lab, Institute of Computing, University of Campinas - UNICAMP, 13083-852, Campinas, SP - Brazil
Leonor Patricia C. Morellato , Phenology Lab, Dept. of Botany, Sao Paulo State University - UNESP, 13506-900, Rio Claro, SP - Brazil
pp. 1-8

Towards HPC for the digital Humanities, Arts, and Social Sciences: Needs and challenges of adapting academic HPC for big data (Abstract)

Kalev H. Leetaru , Graduate School of Library and Information Science, University of Illinois, Urbana, USA
pp. 1-6

Happy or not: Generating topic-based emotional heatmaps for Culturomics using CyberGIS (Abstract)

Eric Shook , Department of Geography and Geographic Information Science, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801
Kalev Leetaru , University of Illinois at Urbana-Champaign, Urbana, Illinois 61801
Guofeng Cao , Department of Geography and Geographic Information Science, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801
Anand Padmanabhan , Department of Geography and Geographic Information Science, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801
Shaowen Wang , University of Illinois at Urbana-Champaign, Urbana, Illinois 61801
pp. 1-6

High-performance computing without commitment: SC2IT: A cloud computing interface that makes computational science available to non-specialists (Abstract)

Kevin Jorissen , Dept. of Physics, University of Washington, Seattle, WA 98144, USA
William Johnson , Dept. of Physics, University of Washington, Seattle, WA 98144, USA
Fernando D. Vila , Dept. of Physics, University of Washington, Seattle, WA 98144, USA
John J. Rehr , Dept. of Physics, University of Washington, Seattle, WA 98144, USA
pp. 1-6

Lessons learned from Galaxy, a Web-based platform for high-throughput genomic analyses (Abstract)

Jeremy Goecks , Departments of Biology and Math & Computer Science, Emory University, Atlanta, GA, United States
Anton Nekrutenko , Center for Comparative Genomics and Bioinformatics, Penn State University, University Park, PA, United States
James Taylor , Departments of Biology and Math & Computer Science, Emory University, Atlanta, GA, United States
pp. 1-6

High-performance data management for genome sequencing centers using Globus Online: A case study (Abstract)

Dinanath Sulakhe , Computation Institute, Argonne National Laboratory and University of Chicago, Chicago, IL 60637 USA
Rajkumar Kettimuthu , Computation Institute, Argonne National Laboratory and University of Chicago, Chicago, IL 60637 USA
Utpal Dave , Computation Institute, Argonne National Laboratory and University of Chicago, Chicago, IL 60637 USA
pp. 1-6

FRED Navigator: An interactive system for visualizing results from large-scale epidemic simulations (Abstract)

Jack Paparian , Carnegie Mellon University, Pittsburgh, PA, USA
Shawn Brown , University of Pittsburgh, Pittsburgh, PA, USA
Donald Burke , University of Pittsburgh, Pittsburgh, PA, USA
John Grefenstette , University of Pittsburgh, Pittsburgh, PA, USA
pp. 1-5

Digitization and search: A non-traditional use of HPC (Abstract)

Liana Diesendruck , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Luigi Marini , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Rob Kooper , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Mayank Kejriwal , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
Kenton McHenry , National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign
pp. 1-6

Large Scale Video Analytics: On-demand, iterative inquiry for moving image research (Abstract)

Virginia Kuhn , USC, Los Angeles, CA, USA
Ritu Arora , TACC, Austin, TX, USA
Alan Craig , ICHASS, Urbana, IL, USA
Kevin Franklin , ICHASS, Urbana, IL, USA
Michael Simeone , ICHASS, Urbana, IL, USA
Dave Bock , NCSA, Urbana, IL, USA
Luigi Marini , NCSA, Urbana, IL, USA
pp. 1-5

Incorporating circulation data in relevancy rankings for search algorithms in library collections (Abstract)

Harriett E. Green , University Library, University of Illinois at Urbana-Champaign, Urbana, IL, USA
Kirk Hess , University Library, University of Illinois at Urbana-Champaign, Urbana, IL, USA
Richard Hislop , Department of Economics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
pp. 1-6

Overview of the TriBITS lifecycle model: A Lean/Agile software lifecycle model for research-based computational science and engineering software (Abstract)

Roscoe A. Bartlett , Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, TN 37831
Michael A. Heroux , Sandia National Laboratories, P.O. Box 5800 Albuquerque, NM 87185-1320
James M. Willenbring , Sandia National Laboratories, P.O. Box 5800 Albuquerque, NM 87185-1320
pp. 1-8

IPOL: Reviewed publication and public testing of research software (Abstract)

Nicolas Limare , CMLA, ENS Cachan, 61 Av. du Pdt Wilson, 94235 Cachan Cedex, France
Laurent Oudre , CMLA, ENS Cachan, 61 Av. du Pdt Wilson, 94235 Cachan Cedex, France
Pascal Getreuer , CMLA, ENS Cachan, 61 Av. du Pdt Wilson, 94235 Cachan Cedex, France
pp. 1-8

On realizing the concept study ScienceSoft of the European Middleware Initiative: Open Software for Open Science (Abstract)

Alberto Di Meglio , European Center for Nuclear Research, CERN, Geneva, Switzerland
Florida Estrella , European Center for Nuclear Research, CERN, Geneva, Switzerland
Morris Riedel , Juelich Supercomputing Centre, Forschungszentrum Juelich, Juelich, Germany
pp. 1-8

ExSciTecH: Expanding volunteer computing to Explore Science, Technology, and Health (Abstract)

M. Matheny , University of Delaware Dept. of Computer & Inf. Sciences
S. Schlachter , University of Delaware Dept. of Computer & Inf. Sciences
L. M. Crouse , Millersville University Dept. of Computer Science
E. T. Kimmel , Millersville University Dept. of Computer Science
T. Estrada , University of Delaware Dept. of Computer & Inf. Sciences
M. Schumann , Thomas Jefferson University School of Pharmacy Dept. of Pharmaceutical Sciences
R. Armen , Thomas Jefferson University School of Pharmacy Dept. of Pharmaceutical Sciences
G. Zoppetti , Millersville University Dept. of Computer Science
M. Taufer , University of Delaware Dept. of Computer & Inf. Sciences
pp. 1-8

Experiences in the design and implementation of a Social Cloud for Volunteer Computing (Abstract)

Ryan Chard , School of Engineering and Computer Science, Victoria University of Wellington, Wellington, New Zealand
Kris Bubendorfer , School of Engineering and Computer Science, Victoria University of Wellington, Wellington, New Zealand
Kyle Chard , Computation Institute, University of Chicago and Argonne National Laboratory, Chicago, IL, USA
pp. 1-8

g-Social: Enhancing integrated e-science tools with Social Networking functionality (Abstract)

Andriani Stylianou , Department of Computer Science, École Polytechnique Fédérale de Lausanne
Nicholas Loulloudes , Department of Computer Science, University of Cyprus
Marios D. Dikaiakos , Department of Computer Science, University of Cyprus
pp. 1-8

RunMyCode.org: A novel dissemination and collaboration platform for executing published computational results (Abstract)

Victoria Stodden , Department of Statistics, Columbia University, New York City, USA
Christophe Hurlin , Department of Economics, University of Orléans, France
Christophe Perignon , Finance Department, HEC Paris, France
pp. 1-8

Towards a quantitative academic internationalization assessment of Brazilian research groups (Abstract)

Evelyn Perez-Cervantes , Institute of Mathematics and Statistics, University of São Paulo, Brazil
Jesus P. Mena-Chalco , Center for Mathematics, Computation and Cognition, Federal University of ABC, Brazil
Roberto M. Cesar-Jr , Institute of Mathematics and Statistics, University of São Paulo, Brazil
pp. 1-8

Towards the gamification of well-being measures (Abstract)

Margeret Hall , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
Steven O. Kimbrough , The Wharton School, University of Pennsylvania, USA
Christian Haas , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
Christof Weinhardt , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
Simon Caton , Karlsruhe Service Research Institute, Karlsruhe Institute of Technology, Germany
pp. 1-8

Enabling large genomic data transfers using nation-wide and international dynamic lightpaths (Abstract)

Jan Bot , LIACS, Leiden University, Leiden, The Netherlands
Migiel de Vos , SURFnet, Utrecht, The Netherlands
Sander Boele , SARA, Amsterdam, The Netherlands
Marcel Reinders , SARA, Amsterdam, The Netherlands
Joost Kok , LIACS, Leiden University, Leiden, The Netherlands
pp. 1-2

Pilot abstractions for compute, data, and network (Abstract)

Mark Santcroos , Academic Medical Center, University of Amsterdam, The Netherlands
Silvia Delgado Olabarriaga , Academic Medical Center, University of Amsterdam, The Netherlands
Daniel S. Katz , University of Chicago & Argonne National Laboratory, USA
Shantenu Jha , Rutgers University, USA
pp. 1-2

Verification and user experience of high data rate bandwidth-on-demand networks (Abstract)

Richard Hughes-Jones , DANTE, City House, 126-130 Hills Road, Cambridge CB2 1PQ, UK
Ralph Spencer , Jodrell Bank Observatory, School of Physics and Astronomy, The University of Manchester, Lower Withington Macclesfield SK11 9DL, UK
pp. 1-2

Dynamic network provisioning for data intensive applications in the cloud (Abstract)

Paul Ruth , Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
Anirban Mandal , Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
Yufeng Xin , Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
Ilia Baldine , Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
Chris Heerman , Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
Jeff Chase , Computer Science, Duke University, Durham, NC, USA
pp. 1-2

Efficient data transfer protocols for big data (Abstract)

Brian Tierney , Lawrence Berkeley National Laboratory, Berkeley, CA 94270
Ezra Kissel , School of Informatics and Computing, Indiana University, Bloomington, IN 47405
Martin Swany , School of Informatics and Computing, Indiana University, Bloomington, IN 47405
Eric Pouyoul , Lawrence Berkeley National Laboratory, Berkeley, CA 94270
pp. 1-9

Velo and REXAN — Integrated data management and high speed analysis for experimental facilities (Abstract)

Kerstin Kleese van Dam , Pacific Northwest National Laboratory, Richland, USA
James Carson , Pacific Northwest National Laboratory, Richland, USA
Abigail Corrigan , Pacific Northwest National Laboratory, Richland, USA
Daniel Einstein , Pacific Northwest National Laboratory, Richland, USA
Zoe Guillen , Pacific Northwest National Laboratory, Richland, USA
Brandi Heath , Pacific Northwest National Laboratory, Richland, USA
Andrew Kuprat , Pacific Northwest National Laboratory, Richland, USA
Ingela Lanekoff , Pacific Northwest National Laboratory, Richland, USA
Carina Lansing , Pacific Northwest National Laboratory, Richland, USA
Julia Laskin , Pacific Northwest National Laboratory, Richland, USA
Dongsheng Li , Pacific Northwest National Laboratory, Richland, USA
Yan Liu , Pacific Northwest National Laboratory, Richland, USA
Matthew Marshall , Pacific Northwest National Laboratory, Richland, USA
Erin Miller , Pacific Northwest National Laboratory, Richland, USA
Galya Orr , Pacific Northwest National Laboratory, Richland, USA
Paulo Pinheiro da Silva , Pacific Northwest National Laboratory, Richland, USA
Seun Ryu , Pacific Northwest National Laboratory, Richland, USA
Craig Szymanski , Pacific Northwest National Laboratory, Richland, USA
Mathew Thomas , Pacific Northwest National Laboratory, Richland, USA
pp. 1-9

X-ray imaging software tools for HPC clusters and the Cloud (Abstract)

Darren Thompson , Commonwealth Scientific and Industrial Research Organisation, Clayton, Victoria, Australia
Alex Khassapov , Commonwealth Scientific and Industrial Research Organisation, Clayton, Victoria, Australia
Yakov Nesterets , Commonwealth Scientific and Industrial Research Organisation, Clayton, Victoria, Australia
Timur Gureyev , Commonwealth Scientific and Industrial Research Organisation, Clayton, Victoria, Australia
John Taylor , Commonwealth Scientific and Industrial Research Organisation, Clayton, Victoria, Australia
pp. 1-7

eResearch environment for remote instrumentation: VBL, RLI, VisLabl & 2 (Abstract)

Chris Myers , VeRSI, Melbourne, Australia
Michael D'Silva , VeRSI Melbourne, Australia (line 3)
pp. 1-2

GridFTP based real-time data movement architecture for x-ray photon correlation spectroscopy at the Advanced Photon Source (Abstract)

S. Narayanan , Advanced Photon Source, Argonne National Laboratory, Argonne, IL, USA
T. J. Madden , Advanced Photon Source, Argonne National Laboratory, Argonne, IL, USA
A. R. Sandy , Advanced Photon Source, Argonne National Laboratory, Argonne, IL, USA
Raj Kettimuthu , Mathematics and Computer Science, Argonne National Laboratory, Argonne, IL, USA
Michael Link , Mathematics and Computer Science, Argonne National Laboratory, Argonne, IL, USA
pp. 1-8

From scripts towards provenance inference (Abstract)

Mohammad Rezwanul Huq , Department of Computer Science, University of Twente, 7522NB, Enschede, The Netherlands
Peter M. G. Apers , Department of Computer Science, University of Twente, 7522NB, Enschede, The Netherlands
Andreas Wombacher , Department of Computer Science, University of Twente, 7522NB, Enschede, The Netherlands
Yoshihide Wada , Department of Physical Geography, Utrecht University, 3584CS, Utrecht, The Netherlands
Ludovicus P. H. van Beek , Department of Physical Geography, Utrecht University, 3584CS, Utrecht, The Netherlands
pp. 1-8

Data intensive science at synchrotron based 3D x-ray imaging facilities (Abstract)

Francesco De Carlo , Argonne National Laboratory, Argonne, IL, USA
Xianghui Xiao , Argonne National Laboratory, Argonne, IL, USA
Kamel Fezzaa , Argonne National Laboratory, Argonne, IL, USA
Steve Wang , Argonne National Laboratory, Argonne, IL, USA
Nicholas Schwarz , Argonne National Laboratory, Argonne, IL, USA
Chris Jacobsen , Argonne National Laboratory, Argonne, IL, USA
Nikhilesh Chawla , Arizona State University, Tempe, Arizona, USA
Florian Fusseis , Ruhr-Universität Bochum, Bochum, Germany
pp. 1-3

IRMIS: The care and feeding of a generalized relatively relational database for accelerator components with a connection to the real time EPICS Input output controllers (Abstract)

Richard Farnsworth , Advanced Photon source, Argonne National Labs, Argonne, IL, USA
Scott Benes , Advanced Photon source, Argonne National Labs, Argonne, IL, USA
pp. 1-3

Web applications for experimental control at CLS (Abstract)

Dong Liu , Canadian Light Source, University of Saskatchewan, Saskatoon, Canada
Dylan Maxwell , Canadian Light Source, University of Saskatchewan, Saskatoon, Canada
Elder Matias , Canadian Light Source, University of Saskatchewan, Saskatoon, Canada
pp. 1-4

The Earth System Grid Federation: An open infrastructure for access to distributed geospatial data (Abstract)

Luca Cinquini , Jet Propulsion Laboratory (JPL), California Institute of Technology, Pasadena (CA), U.S.A.
Daniel Crichton , Jet Propulsion Laboratory (JPL), California Institute of Technology, Pasadena (CA), U.S.A.
Chris Mattmann , Jet Propulsion Laboratory (JPL), California Institute of Technology, Pasadena (CA), U.S.A.
John Harney , Oak Ridge National Laboratory (ORNL), Oak Ridge (TN), U.S.A
Galen Shipman , Oak Ridge National Laboratory (ORNL), Oak Ridge (TN), U.S.A
Feiyi Wang , Oak Ridge National Laboratory (ORNL), Oak Ridge (TN), U.S.A
Rachana Ananthakrishnan , University of Chicago/Argonne National Laboratory (ANL), Argonne (IL), U.S.A.
Neill Miller , University of Chicago/Argonne National Laboratory (ANL), Argonne (IL), U.S.A.
Sebastian Denvil , Institut Pierre Simon Laplace (IPSL), Paris, France
Mark Morgan , Institut Pierre Simon Laplace (IPSL), Paris, France
Zed Pobre , Goddard Space Flight Center (GSFC), Greenbelt (MD), U.S.A.
Gavin M. Bell , Lawrence Livermore National Laboratory (LLNL), Livermore (CA), U.S.A.
Bob Drach , Lawrence Livermore National Laboratory (LLNL), Livermore (CA), U.S.A.
Dean Williams , Lawrence Livermore National Laboratory (LLNL), Livermore (CA), U.S.A.
Philip Kershaw , STFC Rutherford Appleton Laboratory, NCAS/BADC, Didcot, Oxfordshire, United Kingdom
Stephen Pascoe , STFC Rutherford Appleton Laboratory, NCAS/BADC, Didcot, Oxfordshire, United Kingdom
Estanislao Gonzalez , German Climate Computing Center (DKRZ), Hamburg, Germany
Sandro Fiore , Euro-Mediterranean Center on Climate Change (CMCC), Lecce, Italy
Roland Schweitzer , Pacific Marine Environmental Laboratory (PMEL), Seattle (WA), U.S.A.
pp. 1-10

Automated data verification in a large-scale citizen science project: A case study (Abstract)

Jun Yu , School of EECS, Oregon State University, Corvallis, OR USA
Steve Kelling , Cornell Lab of Ornithology, Cornell University, Ithaca, NY USA
Jeff Gerbracht , Cornell Lab of Ornithology, Cornell University, Ithaca, NY USA
Weng-Keen Wong , School of EECS, Oregon State University, Corvallis, OR USA
pp. 1-8

Partial replica selection for spatial datasets (Abstract)

Yun Tian , Department of Computer and Information Science, University Of Mississippi, University, Mississippi 38677
Philip J. Rhodes , Department of Computer and Information Science, University Of Mississippi, University, Mississippi 38677
pp. 1-10

Adaptive sampling of streaming signals (Abstract)

Barbara S. Minsker , Dept. of Civil & Environ. Eng., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
Tristan A. Wietsma , Dept. of Civil & Environ. Eng., Univ. of Illinois at Urbana-Champaign, Urbana, IL, USA
pp. 1-7

Enabling scientific data sharing and re-use (Abstract)

R. Darby , Science and Technology, Facilities Council, Didcot, UK
S. Lambert , Science and Technology, Facilities Council, Didcot, UK
B. Matthews , Science and Technology, Facilities Council, Didcot, UK
M. Wilson , Science and Technology, Facilities Council, Didcot, UK
K. Gitmans , Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
S. Dallmeier-Tiessen , CERN, Geneva, Switzerland
S. Mele , CERN, Geneva, Switzerland
J. Suhonen , CSC - IT Center for Science, Espoo, Finland
pp. 1-8

Temporal representation for scientific data provenance (Abstract)

Peng Chen , School of Informatics and Computing, Indiana University
Beth Plale , School of Informatics and Computing, Indiana University
Mehmet S. Aktas , Information Technologies Institute, Tubitak
pp. 1-8

Collaborative information management in scientific research processes (Abstract)

Shirley Crompton , Scientific Computing, Daresbury Laboratory, Science and Technology Facilities Council, Warrington, Cheshire, UK
Brian Matthews , Scientific Computing, Rutherford-Appleton Laboratory, Science and Technology Facilities Council, Didcot, Oxfordshire, UK
Erica Yang , Scientific Computing, Rutherford-Appleton Laboratory, Science and Technology Facilities Council, Didcot, Oxfordshire, UK
Cameron Neylon , ISIS, Rutherford-Appleton Laboratory, Science and Technology Facilities Council, Didcot, Oxfordshire, UK
Simon Coles , School of Chemistry, University of Southampton, Southampton, UK
pp. 1-7

A new optimization phase for scientific workflow management systems (Abstract)

Sonja Holl , Juelich Supercomputing Centre (JSC), Forschungszentrum Juelich, 52425 Juelich, Germany
Olav Zimmermann , Juelich Supercomputing Centre (JSC), Forschungszentrum Juelich, 52425 Juelich, Germany
Martin Hofmann-Apitius , Fraunhofer Institute for Algorithms, and Scientific Computing (SCAI), Schloss Birlinghoven, 53754 Sankt Augustin, Germany
pp. 1-8

Provenance analysis: Towards quality provenance (Abstract)

You-Wei Cheah , School of Informatics and Computing, Indiana University, Bloomington, IN U.S.A.
Beth Plale , School of Informatics and Computing, Indiana University, Bloomington, IN U.S.A.
pp. 1-8

A data-driven urban research environment for Australia (Abstract)

Richard O. Sinnott , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Christopher Bayliss , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Gerson Galang , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Phillip Greenwood , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
George Koetsier , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Damien Mannix , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Luca Morandini , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Marcos Nino-Ruiz , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Chris Pettit , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Martin Tomko , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Muhammed Sarwar , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Robert Stimson , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
William Voorsluys , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
Ivo Widjaja , The Australian Urban Research Infrastructure Network (AURIN), University of Melbourne, VIC, 3052 Australia
pp. 1-8

Why workflows break — Understanding and combating decay in Taverna workflows (Abstract)

Jun Zhao , Department of Zoology, University of Oxford, Oxford, UK
Jose Manuel Gomez-Perez , iSOCO, Madrid, Spain
Khalid Belhajjame , School of Computer Science, University of Manchester, Manchester, UK
Graham Klyne , Department of Zoology, University of Oxford, Oxford, UK
Esteban Garcia-Cuesta , iSOCO, Madrid, Spain
Aleix Garrido , iSOCO, Madrid, Spain
Kristina Hettne , Leiden University Medical Centre, Leiden, NL
Marco Roos , Leiden University Medical Centre, Leiden, NL
David De Roure , Oxford e-Research Center, University of Oxford, Oxford, UK
Carole Goble , School of Computer Science, University of Manchester, Manchester, UK
pp. 1-9

Using Promethee methods for multi-criteria pull-based scheduling on DCIs (Abstract)

Mircea Moca , Babes-Bolyai University, Cluj-Napoca, România
Gilles Fedak , INRIA, Université de Lyon, France
pp. 1-8

Fast confidential search for bio-medical data using Bloom filters and Homomorphic Cryptography (Abstract)

Henning Perl , Distributed Computing and Security Group, Leibniz University Hannover, Germany
Yassene Mohammed , Biomolecular Mass Spectrometry Unit, Department of Parasitology, Leiden University Medical Center, The Netherlands
Michael Brenner , Distributed Computing and Security Group, Leibniz University Hannover, Germany
Matthew Smith , Distributed Computing and Security Group, Leibniz University Hannover, Germany
pp. 1-8

Data-oriented research for bioresource utilization: A case study to investigate water uptake in cellulose using Principal Components (Abstract)

Liu Yi Ling , Brazilian Bioethanol Science and Technology Laboratory - CTBE/CNPEM, Campinas SP, Brazil
Carlos Driemeier , Brazilian Bioethanol Science and Technology Laboratory - CTBE/CNPEM, Campinas SP, Brazil
Roberto M. Cesar , Brazilian Bioethanol Science and Technology Laboratory - CTBE/CNPEM, Campinas SP, Brazil
pp. 1-7

Generalized representation and mapping for social-ecological data: Freeing data from the database (Abstract)

Scott Jensen , School of Informatics and Computing, Indiana University, Bloomington, Indiana U.S.A
Beth Plale , School of Informatics and Computing, Indiana University, Bloomington, Indiana U.S.A
Xiaozhong Liu , School of Library and Information Science, Indiana University, Bloomington, Indiana U.S.A
Miao Chen , School of Informatics and Computing, Indiana University, Bloomington, Indiana U.S.A
David Leake , School of Informatics and Computing, Indiana University, Bloomington, Indiana U.S.A
Julie England , Vincent and Elinor Ostrom Workshop in Political Theory and Policy Analysis, Indiana University, Bloomington, Indiana U.S.A
pp. 1-8

Cooperative VM migration for a virtualized HPC cluster with VMM-bypass I/O devices (Abstract)

Ryousei Takano , National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568 Japan
Hidemoto Nakada , National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568 Japan
Takahiro Hirofuchi , National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568 Japan
Yoshio Tanaka , National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568 Japan
Tomohiro Kudoh , National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568 Japan
pp. 1-8

Open Social based group access control framework for e-Science data infrastructure (Abstract)

Hui Zhang , State Key Software Development Environment Lab, Beihang University, Beijing, China
Wenjun Wu , State Key Software Development Environment Lab, Beihang University, Beijing, China
Zhenan Li , State Key Software Development Environment Lab, Beihang University, Beijing, China
pp. 1-8

MIM: A Minimum Information Model vocabulary and framework for Scientific Linked Data (Abstract)

Matthew Gamble , School of Computer Science, University of Manchester, UK
Carole Goble , School of Computer Science, University of Manchester, UK
Graham Klyne , Image Bioinformatics Research Group, Department of Zoology, University of Oxford, UK
Jun Zhao , Image Bioinformatics Research Group, Department of Zoology, University of Oxford, UK
pp. 1-8
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