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2013 IEEE International Conference on Cluster Computing (CLUSTER) (2003)
Hong Kong
Dec. 1, 2003 to Dec. 4, 2003
ISBN: 0-7695-2066-9
TABLE OF CONTENTS
Introduction
Tutorials

Using MPI-2: Advanced Features of the Message Passing Interface (PDF)

R. Thakur , Argonne National Lab
W. Gropp , Argonne National Lab
R. Ross , Argonne National Lab
E. Lusk , Argonne National Lab
pp. xix

Building and Managing Clusters with NPACI Rocks (PDF)

N. Ninaba , Singapore Computer Systems
M. Katz , San Diego Supercomputer Center
P. Papadopoulos , San Diego Supercomputer Center
F. Sacerdoti , San Diego Supercomputer Center
G. Bruno , San Diego Supercomputer Center
L. Liew , Singapore Computer Systems
pp. xxi
Technical Session

Grid Demo — Live Demonstrations of Grid Technologies and Applications (PDF)

Rajkumar Buyya , University of Melbourne
Peter Kacsuk , MTA SZTAKI Research Institute
pp. xxii
Scheduling I

Dynamic Scheduling of Parallel Real-Time Jobs by Modelling Spare Capabilities in Heterogeneous Clusters (Abstract)

Ligang He , University of Warwick
Graham R. Nudd , University of Warwick
Stephen A. Jarvis , University of Warwick
Daniel P. Spooner , University of Warwick
pp. 2

Parallel Job Scheduling on Multicluster Computing Systems (Abstract)

J. H. Abawajy , Carleton University
S. P. Dandamudi , Carleton University
pp. 11
Applications

A Cluster-Based Solution for High Performance Hmmpfam Using EARTH Execution Model (Abstract)

Chuan Shen , University of Delaware
Guang R. Gao , University of Delaware
Jizhu Lu , University of Delaware
Yanwei Niu , University of Delaware
Weirong Zhu , University of Delaware
pp. 30

Computing Large-Scale Alignments on a Multi-Cluster (Abstract)

Chunxi Chen , Nanyang Technological University
Bertil Schmidt , Nanyang Technological University
pp. 38

Auto-CFD: Efficiently Parallelizing CFD Applications on Clusters (Abstract)

Xiaodong Zhang , College of William and Mary
Baiming Feng , Chinese Academy of Sciences
Li Xiao , Michigan State University
Zhengqian Kuang , Northwestern Polytechnical University
Jichang Kang , Northwestern Polytechnical University
pp. 46
Performance Analysis

Performance Analysis of a Large-Scale Cosmology Application on Three Cluster Systems (Abstract)

Zhiling Lan , Illinois Institute of Technology
Prathibha Deshikachar , Illinois Institute of Technology
pp. 56

A Performance Monitor Based on Virtual Global Time for Clusters of PCs (Abstract)

Thomas Stricker , ETH Zurich
Michela Taufer , University of California at San Diego and ETH Zurich
pp. 64

A Distributed Performance Analysis Architecture for Clusters (Abstract)

Wolfgang E. Nagel , Dresden University of Technology
Allen D. Malony , University of Oregon
Holger Brunst , Dresden University of Technology and University of Oregon
pp. 73
Scheduling II

Co-Ordinated Coscheduling in Time-Sharing Clusters through a Generic Framework (Abstract)

Andy B. Yoo , Lawrence Livermore National Laboratory
Gyu Sang Choi , Pennsylvania State University
Shailabh Nagar , IBM T.J. Watson Research Center
Saurabh Agarwal , IBM India Research Labs
Chita R. Das , Pennsylvania State University
pp. 84

A Robust Scheduling Strategy for Moldable Scheduling of Parallel Jobs (Abstract)

P. Sadayappan , Ohio State University
Sudha Srinivasan , Ohio State University
Savitha Krishnamoorthy , Ohio State University
pp. 92

Towards Load Balancing Support for I/O-Intensive Parallel Jobs in a Cluster of Workstations (Abstract)

David R. Swanson , University of Nebraska-Lincoln
Yifeng Zhu , University of Nebraska-Lincoln
Xiao Qin , University of Nebraska-Lincoln
Hong Jiang , University of Nebraska-Lincoln
pp. 100
Java

JavaSplit: A Runtime for Execution of Monolithic Java Programs on Heterogeneous Collections of Commodity Workstations (Abstract)

Konstantin Shagin , Israel Institute of Technology
Michael Factor , IBM Research Lab in Haifa
Assaf Schuster , Israel Institute of Technology
pp. 110

Performance Analysis of Java Message-Passing Libraries on Fast Ethernet, Myrinet and SCI Clusters (Abstract)

Juan Touriño , University of A Coruña
Guillermo L. Taboada , University of A Coruña
Ramón Doallo , University of A Coruña
pp. 118

Compiler Optimized Remote Method Invocation (Abstract)

Michael Philippsen , University of Erlangen-Nuremberg
Ronald Veldema , University of Erlangen-Nuremberg
pp. 127
Communication I

Optimizing Mechanisms for Latency Tolerance in Remote Memory Access Communication on Clusters (Abstract)

V. Tipparaju , Pacific Northwest National Laboratory
J. Nieplocha , Pacific Northwest National Laboratory
G. Santhanaraman , Ohio State University
M. Krishnan , Pacific Northwest National Laboratory
D. K. Panda , Ohio State University
pp. 138

Impact of Computational Resource Reservation to the Communication Performance in the Hypercluster Environment (Abstract)

K. W. Tse , Hong Kong Polytechnic University
P. K. Lun , Hong Kong Polytechnic University
pp. 148

Kernel Implementations of Locality-Aware Dispatching Techniques for Web Server Clusters (Abstract)

M. Di Santo , University of Sannio
E. Zimeo , University of Sannio
N. Ranaldo , University of Sannio
pp. 154
Middleware

Adaptive Grid Resource Brokering (Abstract)

Peter Dew , University of Leeds
Abdulla Othman , University of Leeds
Karim Djemame , University of Leeds
Iain Gourlay , University of Leeds
pp. 172

HPCM: A Pre-Compiler Aided Middleware for the Mobility of Legacy Code (Abstract)

Kasidit Chanchio , Oak Ridge National Laboratory
Cong Du , Illinois Institute of Technology
Xian-He Sun , Illinois Institute of Technology
pp. 180
Cluster/Job Management I

The ProcessManagement Component of a Scalable Systems Software Environment (Abstract)

Ralph Butler , Middle Tennessee State University
Andrew Lusk , Argonne National Laboratory
Ewing Lusk , Argonne National Laboratory
Narayan Desai , Argonne National Laboratory
pp. 190

Load Distribution for Heterogeneous and Non-Dedicated Clusters Based on Dynamic Monitoring and Differentiated Services (Abstract)

Hermes Senger , Universidade Católica de Santos
Liria Matsumoto Sato , Escola Politécnica - Universidade de São Paulo
pp. 199

GridRM: An Extensible Resource Monitoring System (Abstract)

Garry Smith , University of Portsmouth
Mark Baker , University of Portsmouth
pp. 207
I/O I

A High Performance Redundancy Scheme for Cluster File Systems (Abstract)

Manoj Pillai , Ohio State University
Mario Lauria , Ohio State University
pp. 216

VegaFS: A Prototype for File-Sharing Crossing Multiple Administrative Domains (Abstract)

Wei Li , Chinese Academy of Sciences
Zhiwei Xu , Chinese Academy of Sciences
Jianmin Liang , Chinese Academy of Sciences
pp. 224

Design and Performance of the Dawning Cluster File System (Abstract)

Jin Xiong , Chinese Academy of Sciences
Ninghui Sun , Chinese Academy of Sciences
Guojie Li , Chinese Academy of Sciences
Sining Wu , Chinese Academy of Sciences
Dan Meng , Chinese Academy of Sciences
pp. 232
Novel Systems

Coordinated Checkpoint versus Message Log for Fault Tolerant MPI (Abstract)

Aurélien Bouteiller , Université de Paris Sud
Franck Cappello , Université de Paris Sud
Géraud Krawezik , Université de Paris Sud
Pierre Lemarinier , Université de Paris Sud
pp. 242

A Performance Comparison of Linux and a Lightweight Kernel (Abstract)

Ron Brightwell , Sandia National Laboratories
Patrick Bridges , University of New Mexico
Keith Underwood , Sandia National Laboratories
Arthur B. Maccabe , University of New Mexico
Rolf Riesen , Sandia National Laboratories
Trammell B. Hudson , Operating Systems Research, Inc.
pp. 251

Implications of a PIM Architectural Model for MPI (Abstract)

Jay Brockman , University of Notre Dame
Richard Murphy , University of Notre Dame
Keith Underwood , Sandia National Labs
Peter Kogge , University of Notre Dame
Ron Brightwell , Sandia National Labs
Arun Rodrigues , University of Notre Dame
pp. 259
Cluster/Job Management II

Reusable Mobile Agents for Cluster Computing (Abstract)

Ichiro Satoh , National Institute of Informatics
pp. 270

High Service Reliability for Cluster Server Systems (Abstract)

M. Rabiei , University College of Science and Technology
A. Noraziah , University College of Engineering and Technology
M. Mat Deris , University College of Science and Technology
H. M. Suzuri , University College of Science and Technology
pp. 281

Wide Area Cluster Monitoring with Ganglia (Abstract)

Matthew L. Massie , University of California at Berkeley
Mason J. Katz , San Diego Supercomputing Center
Federico D. Sacerdoti , San Diego Supercomputing Center
David E. Culler , University of California at Berkeley
pp. 289
Novel Software

Efficient Parallel Out-of-Core Matrix Transposition (Abstract)

Sriram Krishnamoorthy , Ohio State University
Chi-Chung Lam , Ohio State University
Gerald Baumgartner , Ohio State University
P. Sadayappan , Ohio State University
Daniel Cociorva , Ohio State University
pp. 300

A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters (Abstract)

Yifeng Zhu , University of Nebraska-Lincoln
Hong Jiang , University of Nebraska-Lincoln
David Swanson , University of Nebraska-Lincoln
Xiao Qin , University of Nebraska-Lincoln
pp. 308
I/O II

Efficient Structured Data Access in Parallel File Systems (Abstract)

Avery Ching , Northwestern University
William Gropp , Argonne National Laboratory
Wei-keng Liao , Northwestern University
Robert Ross , Argonne National Laboratory
Alok Choudhary , Northwestern University
pp. 326

View I/O: Improving the Performance of Non-Contiguous I/O (Abstract)

Walter F. Tichy , University of Karlsruhe
Florin Isaila , University of Karlsruhe
pp. 336

Supporting Efficient Noncontiguous Access in PVFS over InfiniBand (Abstract)

Jiesheng Wu , Ohio State University
Pete Wyckoff , Ohio Supercomputer Center
Dhabaleswar Panda , Ohio State University
pp. 344
Scheduling III

A General Self-Adaptive Task Scheduling System for Non-Dedicated Heterogeneous Computing (Abstract)

Xian-He Sun , Illinois Institute of Technology
Ming Wu , Illinois Institute of Technology
pp. 354

Adding Memory Resource Consideration into Workload Distribution for Software DSM Systems (Abstract)

Tyng-Yeu Liang , National Kaohsiung University of Applied Sciences
Ce-Kuen Shieh , National Chung Kung University
Yen-Tao Liu , National Chung Kung University
pp. 362
High Availability

Availability Prediction and Modeling of High Availability OSCAR Cluster (Abstract)

Chokchai Leangsuksun , Louisiana Tech University
Stephen L. Scott , Oak Ridge National Laboratory
Hertong Song , Louisiana Tech University
Tong Liu , Louisiana Tech University
Lixin Shen , Louisiana Tech University
pp. 380

A System Recovery Benchmark for Clusters (Abstract)

James Mauro , Sun Microsystems, Inc.
Ji Zhu , Sun Microsystems, Inc.
Ira Pramanick , Sun Microsystems, Inc.
pp. 387

Performance Evaluation of Routing Algorithms in RHiNET-2 Cluster (Abstract)

Akiya Jouraku , Keio University
Michihiro Koibuchi , Keio University
Hideharu Amano , Keio University
Konosuke Watanabe , Keio University
Kenichi Kono , Keio University
pp. 395
Communications II

Application-Bypass Reduction for Large-Scale Clusters (Abstract)

Ron Brightwell , Sandia National Laboratories
Darius Buntinas , Ohio State University
Adam Wagner , Ohio State University
Dhabaleswar K. Panda , Ohio State University
pp. 404

Improving the Performance of MPI Derived Datatypes by Optimizing Memory-Access Cost (Abstract)

William Gropp , Argonne National Laboratory
Rajeev Thakur , Argonne National Laboratory
Surendra Byna , Illinois Institute of Technology
Xian-He Sun , Illinois Institute of Technology
pp. 412

Shared Memory Mirroring for Reducing Communication Overhead on Commodity Networks (Abstract)

Bruce Palmer , Pacific Northwest National Laboratory
Jarek Nieplocha , Pacific Northwest National Laboratory
Edoardo Apr? , Pacific Northwest National Laboratory
pp. 420
Poster Session/Short Papers

"Plug-and-Play" Cluster Computing Using Mac OS X (Abstract)

Viktor K. Decyk , University of California at Los Angeles
Dean E. Dauger , Dauger Research, Inc.
pp. 430

Improving Performance of a Dynamic Load Balancing System by Using Number of Effective Tasks (Abstract)

Min Choi , Korea Advanced Institute of Science and Technology
Jung-Lok Yu , Korea Advanced Institute of Science and Technology
Seung-Ryoul Maeng , Korea Advanced Institute of Science and Technology
Ho-Joong Kim , Korea Advanced Institute of Science and Technology
pp. 436

Dynamic Self-Adaptive Replica Location Method in Data Grids (Abstract)

Yijie Wang , National University of Defense Technology
Xicheng Lu , National University of Defense Technology
Dongsheng Li , National University of Defense Technology
Nong Xiao , National University of Defense Technology
Kai Lu , National University of Defense Technology
pp. 442

Efficient Distributed Disk Caching in Data Grid Management (Abstract)

Xiaodong Zhang , College of William and Mary
Song Jiang , College of William and Mary
pp. 446

Optimized Implementation of Extendible Hashing to Support Large File System Directory (Abstract)

Rongfeng Tang , Chinese Academy of Sciences
Dan Meng , Chinese Academy of Sciences
Sining Wu , Chinese Academy of Sciences
pp. 452

Parallel Design Pattern for Computational Biology and Scientific Computing Applications (Abstract)

Bertil Schmidt , Nanyang Technological University
Weiguo Liu , Nanyang Technological University
pp. 456

FJM: A High Performance Java Message Library (Abstract)

Hsin-Ta Chiao , National Chiao Tung University
Tsun-Yu Hsiao , National Chiao Tung University
Shyan-Ming Yuan , National Chiao Tung University
Ming-chun Cheng , National Chiao Tung University
pp. 460

Cluster Architecture with Lightweighted Redundant TCP Stacks (Abstract)

Zhiyuan Shao , Huazhong University of Science and Technology
Hai Jin , Huazhong University of Science and Technology
pp. 464

From Clusters to the Fabric: The Job Management Perspective (Abstract)

Thomas Röblitz , Zuse Institute Berlin
Florian Schintke , Zuse Institute Berlin
Alexander Reinefeld , Zuse Institute Berlin
pp. 468

Towards an Efficient Cluster-Based E-Commerce Server (Abstract)

Benjamin Melamed , Rutgers University
Michael Katehakis , Rutgers University
Victoria Ungureanu , Rutgers University
pp. 474

A Kernel Running in a DSM — Design Aspects of a Distributed Operating System (Abstract)

M. Schoettner , University of Ulm
R. Goeckelmann , University of Ulm
S. Frenz , University of Ulm
P. Schulthess , University of Ulm
pp. 478

Distributed Recursive Sets: Programmability and Effectiveness for Data Intensive Applications (Abstract)

Reidar Conradi , Norwegian University of Science and Technology
Roxana E. Diaconescu , University of California at Irvine
pp. 483

Run-Time Prediction of Parallel Applications on Shared Environments (Abstract)

Jennifer M. Schopf , Argonne National Laboratory
Byoung-Dai Lee , University of Minnesota
pp. 487

A Hierarchical and Distributed Approach for Mapping Large Applications to Heterogeneous Grids Using Genetic Algorithms (Abstract)

Sajal K. Das , University of Texas at Arlington
Rupak Biswas , NASA Ames Research Center
Soumya Sanyal , University of Texas at Arlington
Amit Jain , University of Texas at Arlington
pp. 496

BCFG: A Con.guration Management Tool for Heterogeneous Environments (Abstract)

Rémy Evard , Argonne National Laboratory
Narayan Desai , Argonne National Laboratory
Rick Bradshaw , Argonne National Laboratory
Andrew Lusk , Argonne National Laboratory
pp. 500

Communication Middleware Systems for Heterogenous Clusters: A Comparative Study (Abstract)

Mario Trams , Technische Universität Chemnitz
Wolfgang Rehm , Technische Universität Chemnitz
Daniel Balkanski , Technische Universität Chemnitz
pp. 504

QoS-Aware Adaptive Resource Management in Distributed Multimedia System Using Server Clusters (Abstract)

Mohammad Riaz Moghal , University of Engineering and Technology
Mohammad Saleem Mian , University of Engineering and Technology
pp. 508

On the InfiniBand Subnet Discovery Process (Abstract)

Jos? Duato , Universidad Polit?cnica de Valencia
Rafael Casado , Universidad de Castilla-La Mancha
Timothy M. Pinkston , University of Southern California
Aurelio Berm? , Universidad de Castilla-La Mancha
Francisco J. Quiles , Universidad de Castilla-La Mancha
pp. 512
Author Index

Author Index (PDF)

pp. 519
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