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Cluster Computing and the Grid, IEEE International Symposium on (2005)
Cardiff, Wales, UK
May 9, 2005 to May 12, 2005
ISBN: 0-7803-9074-1
pp: 848-854
V. Zhakhovskii , Inst. of Laser Eng., Osaka Univ., Japan
K. Nishihara , Inst. of Laser Eng., Osaka Univ., Japan
Y. Fukuda , Inst. of Laser Eng., Osaka Univ., Japan
S. Shimojo , Lab. ID, IMAG, Grenoble, France
T. Akiyama , Lab. ID, IMAG, Grenoble, France
S. Miyanaga , Lab. ID, IMAG, Grenoble, France
H. Sone , Lab. ID, IMAG, Grenoble, France
H. Kobayashi , Lab. ID, IMAG, Grenoble, France
E. Ito , Software Eng. & Technol. Labs., Infosys Technol., Bangalore, India
ABSTRACT
A new material particle dynamical domain decomposition method MPD/sup 3/ has been developed. The method is suitable for a large scale parallel molecular dynamic simulation on a heterogeneous computing net. Performance of the MPD/sup 3/ algorithm is tested in various computing environments, such as PC clusters, super computer clusters, and grid. It is shown that the MPD/sup 3/ algorithm is highly-adaptive for both computer clusters and grid computing environments, even if other programs are running on the same computer environment.
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CITATION

H. Kobayashi et al., "A new dynamical domain decomposition method for parallel molecular dynamics simulation," 2005 IEEE International Symposium on Cluster Computing and the Grid(CCGRID), Cardiff, Wales, UK, 2005, pp. 848-854.
doi:10.1109/CCGRID.2005.1558650
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