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June 20, 2007 to June 22, 2007
ISBN: 0-7695-2905-4
pp: 231-236
Fabio Porto , EPFL, Switzerland
Sergio Lifschitz , PUC-Rio, Brazil
Philippe Picouet , ENST Bretagne, France
In-silico experiments require molecular biological knowledge to be mapped into a data model. In a previous work, we have elicited a list of requirements to be attended by a conceptual language for the molecular biology domain. In this paper, we present the evolution of this research by introducing a such language that encompasses most of the identified biological domain requirements. The language offers logical constraints expressions that augments the semantics of data and relationships types, as well as monotonic inheritance. Those aspects address the uncertainty and variability of biological knowledge shortening the gap between scientists mental model and traditional conceptual models.
Jose Antonio Fernandes de Macedo, Fabio Porto, Sergio Lifschitz, Philippe Picouet, "A Conceptual Data Model Language for the Molecular Biology Domain", CBMS, 2007, Twentieth IEEE International Symposium on Computer-Based Medical Systems (CBMS'07), Twentieth IEEE International Symposium on Computer-Based Medical Systems (CBMS'07) 2007, pp. 231-236, doi:10.1109/CBMS.2007.3
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