The Community for Technology Leaders
2013 IEEE Symposium on Biological Data Visualization (BioVis) (2011)
Providence, RI USA
Oct. 23, 2011 to Oct. 24, 2011
ISBN: 978-1-4673-0003-2
TABLE OF CONTENTS
Papers

[Front and back cover] (Abstract)

pp. c1-c4

Inside front cover (Abstract)

pp. c2

[Title page] (Abstract)

pp. i

[Copyright notice] (Abstract)

pp. ii

Contents (Abstract)

pp. iii-iv

Preface (Abstract)

pp. vi-vii

BioVis contest (Abstract)

pp. xvi
Papers

BioVis contest (Abstract)

pp. xvi

Modeling and visualization of receptor clustering on the cellular membrane (Abstract)

M. Falk , VISUS - Visualization Res. Center, Univ. of Stuttgart, Stuttgart, Germany
M. Daub , Inst. of Anal., Dynamics, & Modeling, Univ. of Stuttgart, Stuttgart, Germany
G. Schneider , Inst. of Anal., Dynamics, & Modeling, Univ. of Stuttgart, Stuttgart, Germany
T. Ertl , VISUS - Visualization Res. Center, Univ. of Stuttgart, Stuttgart, Germany
pp. 9-15

Parallel Contour-Buildup algorithm for the molecular surface (Abstract)

M. Krone , Visualization Res. Center (VISUS), Univ. of Stuttgart, Stuttgart, Germany
S. Grottel , Visualization Res. Center (VISUS), Univ. of Stuttgart, Stuttgart, Germany
T. Ertl , Visualization & Interactive Syst. Inst. (VIS), Univ. of Stuttgart, Stuttgart, Germany
pp. 17-22

Visual analysis of next-generation sequencing data to detect overlapping genes in bacterial genomes (Abstract)

S. Simon , Univ. of Konstanz, Konstanz, Germany
D. Oelke , Univ. of Konstanz, Konstanz, Germany
R. Landstorfer , Tech. Univ. of Munich, Munich, Germany
K. Neuhaus , Tech. Univ. of Munich, Munich, Germany
D. A. Keim , Univ. of Konstanz, Konstanz, Germany
pp. 47-54

iHAT: Interactive hierarchical aggregation table (Abstract)

C. Vehlow , VISUS, Univ. of Stuttgart, Stuttgart, Germany
J. Heinrich , VISUS, Univ. of Stuttgart, Stuttgart, Germany
F. Battke , Integrative Transcriptomics, Univ. of Tubingen, Tubingen, Germany
D. Weiskopf , VISUS, Univ. of Stuttgart, Stuttgart, Germany
K. Nieselt , Integrative Transcriptomics, Univ. of Tubingen, Tubingen, Germany
pp. 63-69

A visual analysis system for metabolomics data (Abstract)

R. Maciejewski , Arizona State Univ., Tempe, AZ, USA
Wei Chen , State Key Lab. of CAD&CG, Zhejiang Univ., Hangzhou, China
pp. 71-78

Metrics for comparing explicit representations of interconnected biological networks (Abstract)

D. Mayerich , Beckman Inst. for Adv. Sci. & Technol., Univ. of Illinois, Urbana, IL, USA
C. Bjornsson , Center for Biotechnol. & Interdiscipl. Studies, Rensselaer Polytech. Inst., Troy, NY, USA
J. Taylor , Center for Biotechnol. & Interdiscipl. Studies, Rensselaer Polytech. Inst., Troy, NY, USA
B. Roysam , Dept. of Electr., Univ. of Houston, Houston, TX, USA
pp. 79-86

HiTSEE: A visualization tool for hit selection and analysis in high-throughput screening experiments (Abstract)

E. Bertini , Univ. of Konstanz, Konstanz, Germany
H. Strobelt , Univ. of Konstanz, Konstanz, Germany
J. Braun , Univ. of Konstanz, Konstanz, Germany
Oliver Deussen , Univ. of Konstanz, Konstanz, Germany
Ulrich Groth , Univ. of Konstanz, Konstanz, Germany
T. U. Mayer , Univ. of Konstanz, Konstanz, Germany
D. Merhof , Univ. of Konstanz, Konstanz, Germany
pp. 95-102

RuleBender: Integrated visualization for biochemical rule-based modeling (Abstract)

A. M. Smith , Comput. Sci., Univ. of Pittsburgh, Pittsburgh, PA, USA
Wen Xu , Comput. Sci., Univ. of Pittsburgh, Pittsburgh, PA, USA
Yao Sun , Comput. Sci., Univ. of Pittsburgh, Pittsburgh, PA, USA
J. R. Faeder , Syst. & Comput. Biol., Univ. of Pittsburgh, Pittsburgh, PA, USA
G. E. Marai , Comput. Sci., Univ. of Pittsburgh, Pittsburgh, PA, USA
pp. 103-110

MDMap: A system for data-driven layout and exploration of molecular dynamics simulations (Abstract)

R. Patro , Dept. of Comput. Sci., Univ. of Maryland, College Park, MD, USA
Cheuk Yiu Ip , Dept. of Comput. Sci., Univ. of Maryland, College Park, MD, USA
S. Bista , Dept. of Comput. Sci., Univ. of Maryland, College Park, MD, USA
D. Thirumalai , Biophys. Program, Univ. of Maryland, College Park, MD, USA
A. Varshney , Dept. of Comput. Sci., Univ. of Maryland, College Park, MD, USA
pp. 111-118

Visual exploration of microbial populations (Abstract)

S. J. Fernstad , C-Res., Linkoping Univ., Linköping, Sweden
J. Johansson , C-Res., Linkoping Univ., Linköping, Sweden
S. Adams , Unilever Discover Port Sunlight, Bebington, UK
J. Shaw , Unilever Discover Port Sunlight, Bebington, UK
D. Taylor , Unilever Discover Port Sunlight, Bebington, UK
pp. 127-134

Visualizing virus population variability from next generation sequencing data (Abstract)

M. Correll , Dept. of Comput. Sci., Univ. of Wisconsin, Madison, WI, USA
S. Ghosh , Dept. of Comput. Sci., Univ. of Wisconsin, Madison, WI, USA
D. O'Connor , Dept. of Pathology & Lab. Med., Univ. of Wisconsin, Madison, WI, USA
M. Gleicher , Dept. of Comput. Sci., Univ. of Wisconsin, Madison, WI, USA
pp. 135-142

EVEVis: A multi-scale visualization system for dense evolutionary data (Abstract)

R. Miller , Univ. of California Davis, Davis, CA, USA
V. Mozhayskiy , Univ. of California Davis, Davis, CA, USA
L. Tagkopoulos , Univ. of California Davis, Davis, CA, USA
Kwan-Liu Ma , Univ. of California Davis, Davis, CA, USA
pp. 143-150

Semantically steered visual analysis of highly detailed morphometric shape spaces (Abstract)

M. Hermann , Inst. of Comput. Sci. II, Univ. of Bonn, Bonn, Germany
A. C. Schunke , Max-Planck-Inst. of Evolutionary Biol. Plon, Plon, Germany
R. Klein , Inst. of Comput. Sci. II, Univ. of Bonn, Bonn, Germany
pp. 151-158
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