The Community for Technology Leaders
2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) (2010)
Hong, Kong China
Dec. 18, 2010 to Dec. 18, 2010
ISBN: 978-1-4244-8303-7
TABLE OF CONTENTS

Medical Biometrics-Computerized TCM Diagnosis (PDF)

David Zhang , Biometrics Technology Centre (UGC/CRC), Hong Kong Polytechnic University, China
pp. 4

Predicting metabolic pathways from metabolic networks with limited biological knowledge (PDF)

S.Y. Leung , Department of Computer Science, University of Hong Kong, Pokfulam, Hong Kong
Henry C.M. Leung , Department of Computer Science, University of Hong Kong, Pokfulam, Hong Kong
Carlos L. Xiang , Department of Computer Science, University of Hong Kong, Pokfulam, Hong Kong
S.M. Yiu , Department of Computer Science, University of Hong Kong, Pokfulam, Hong Kong
Francis Y.L. Chin , Department of Computer Science, University of Hong Kong, Pokfulam, Hong Kong
pp. 7-12

PBSK browser: Navigate biological pathways of PSI-MI, BioPAX, SBML and KGML formats (PDF)

Donglin Huang , Department of Bioinformatics, College of Life Sciences, China
Yiling Huang , Department of Bioinformatics, College of Life Sciences, China
Christian Klukas , Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research, 06466 Gatersleben, Germany
Ralf Hofestadt , Bioinformatics / Medical Informatics Department, Faculty of Technology, Bielefeld University, D-33501, Germany
Ming Chen , Department of Bioinformatics, College of Life Sciences, China
pp. 13-18

Using graph modularity analysis to identify transcription factor binding sites (PDF)

Alexandre P. Francisco , INESC-ID / IST, Portugal
Sophie Schbath , INRA, France
Ana T. Freitas , INESC-ID / IST, Portugal
Arlindo L. Oliveira , INESC-ID / IST, Portugal
pp. 19-26

Identification of core-attachment complexes based on maximal frequent patterns in protein-protein interaction networks (PDF)

Liang Yu , School of Computer Science and Technology, Xidian University, Xi'an, China
Lin Gao , School of Computer Science and Technology, Xidian University, Xi'an, China
Chuiliang Kong , School of Computer Science and Technology, Xidian University, Xi'an, China
pp. 29-34

Association network modeling from microarray data around fermentation stress response gene NSF1 (YPL230W) using significantly co-expressed gene set (PDF)

Kyrylo Bessonov , Dept. Bioinformatics, Dept. Molecular and Cellular Biology, University of Guelph, Ontario, Canada
David K.Y. Chiu , Dept. Bioinformatics, School of Computer Science, University of Guelph, Ontario, Canada
George van der Merwe , Molecular and Cellular Biology, University of Guelph, Ontario, Canada
pp. 35-40

Eighth-Sphere Exposure: A three-dimensional solvent exposure measure (PDF)

Peipei Li , Database/Bioinformatics Lab, Chungbuk National University, Korea
Ho Sun Shon , Database/Bioinformatics Lab, Chungbuk National University, Korea
Keun Ho Ryu , Database/Bioinformatics Lab, Chungbuk National University, Korea
Gouchol Pok , Department of Computer Science, Yanbian University of Science and Technology, Yanji, China
pp. 41-46

Fuzzy soft subspace clustering method for gene co-expression network analysis (PDF)

Qiang Wang , Shenzhen Graduate School, Harbin Institute of Technology, Xili, 518055, China
Yunming Ye , Shenzhen Graduate School, Harbin Institute of Technology, Xili, 518055, China
Joshua Zhexue Huang , Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Xili, 518055, China
Shengzhong Feng , Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Xili, 518055, China
pp. 47-50

An efficient hybrid of hill-climbing and genetic algorithm for 2D triangular protein structure prediction (PDF)

Shih-Chieh Su , Department of Computer Science and Information Engineering, National Chung Cheng University, Taiwan
Cheng-Jian Lin , Department of Computer Science and Information Engineering, National Chin-Yi University of Technology, Taiwan
Chuan-Kang Ting , Department of Computer Science and Information Engineering, National Chung Cheng University, Taiwan
pp. 51-56

Sparse representation based feature selection for mass spectrometry data (PDF)

Jiqing Ke , Institute of Biomedical Engineering & Instrument, Hangzhou Dianzi University, China
Lei Zhu , Institute of Biomedical Engineering & Instrument, Hangzhou Dianzi University, China
Bin Han , Institute of Biomedical Engineering & Instrument, Hangzhou Dianzi University, China
Qi Dai , Institute of Biomedical Engineering & Instrument, Hangzhou Dianzi University, China
Yaojia Wang , Institute of Biomedical Engineering & Instrument, Hangzhou Dianzi University, China
Lihua Li , Institute of Biomedical Engineering & Instrument, Hangzhou Dianzi University, China
Shenhua Xu , Zhejiang Cancer Institute, Zhejiang Cancer Hospital, Hangzhou, China
Hanzhou Mou , Zhejiang Cancer Institute, Zhejiang Cancer Hospital, Hangzhou, China
Zhiguo Zheng , Zhejiang Cancer Institute, Zhejiang Cancer Hospital, Hangzhou, China
pp. 57-62

Structural analysis of (TCR—)HLA/peptide complexes: An initial study (PDF)

Stephanus Daniel Handoko , School of Computer Engineering, Nanyang Technological University, Singapore
Tran To Chinh Su , School of Computer Engineering, Nanyang Technological University, Singapore
Chee Keong Kwoh , School of Computer Engineering, Nanyang Technological University, Singapore
Yew Soon Ong , School of Computer Engineering, Nanyang Technological University, Singapore
pp. 63-66

Using a spike-in experiment to evaluate analysis of LC-MS data (PDF)

Leepika Tuli , Lombardi Comprehensive Cancer Center, Georgetown University, Washington DC, USA
Tsung-Heng Tsai , Lombardi Comprehensive Cancer Center, Georgetown University, Washington DC, USA
Rency S. Varghese , Lombardi Comprehensive Cancer Center, Georgetown University, Washington DC, USA
Amrita Cheema , Lombardi Comprehensive Cancer Center, Georgetown University, Washington DC, USA
Habtom W. Ressom , Lombardi Comprehensive Cancer Center, Georgetown University, Washington DC, USA
pp. 67-72

FISH: Finding of identical spectra set for Homogenous peptide using two-stage clustering algorithm (PDF)

Seungmook Lee , Department of Statistics, Seoul National University, Korea
Min-Seok Kwon , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
Hyoung-Joo Lee , Department of Biochemistry, Yonsei Proteome Research Center and Biomedical Proteome Research Center, Yonsei University, Korea
Young-Ki Paik , Department of Biochemistry, Yonsei Proteome Research Center and Biomedical Proteome Research Center, Yonsei University, Korea
Jae K. Lee , Department of Public Health Sciences, Division of Biostatistics, University of Virginia School of Medicine, USA
Taesung Park , Department of Statistics, Seoul National University, Korea
pp. 73-76

On the solution of molecular distance geometry problems with interval data (PDF)

C. Lavor , IMECC-UNICAMP, Campinas-SP, Brazil
L. Liberti , IMECC-UNICAMP, Campinas-SP, Brazil
A. Mucherino , IMECC-UNICAMP, Campinas-SP, Brazil
pp. 77-82

Speed improvements of peptide-spectrum matching using SIMD instructions (PDF)

Jian Zhang , Department of Computer Science, University of Saskatchewan, Canada
Ian McQuillan , Department of Computer Science, University of Saskatchewan, Canada
FangXiang Wu , Department of Mechanical Engineering and Division of Biomedical Engineering, University of Saskatchewan, Canada
pp. 83-88

An adaptive approach to denoising tandem mass spectra (PDF)

Wenjun Lin , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9 Canada
Fang-Xiang Wu , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9 Canada
Jinhon Shi , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9 Canada
Jiarui Ding , Department of Computer Science, University of British Columbia, Vancouver, Canada
Wenjun Zhang , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9 Canada
pp. 89-94

SyncPro : A synchronized visualization tool for differential analysis of proteomics data sets (PDF)

Ling Sing Yung , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Chao Yang , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Mohammed Dakna , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Harald Mischak , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Weichuan Yu , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
pp. 95-100

Prediction of protein structural class using a combined representation of protein-sequence information and support vector machine (PDF)

Li Wu , College of Life Information Science and Instrument Engineering, Hangzhou Dianzi University, China
Qi Dai , College of Life Information Science and Instrument Engineering, Hangzhou Dianzi University, China
Bin Han , College of Life Information Science and Instrument Engineering, Hangzhou Dianzi University, China
Lei Zhu , College of Life Information Science and Instrument Engineering, Hangzhou Dianzi University, China
Lihua Li , College of Life Information Science and Instrument Engineering, Hangzhou Dianzi University, China
pp. 101-106

Computing the connectivity indices of α- and β-cyclodextrins (PDF)

Wu Jiang , Department of Applied Mathematics, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
Shenggui Zhang , Department of Applied Mathematics, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
pp. 107-112

A binary matrix factorization algorithm for protein complex prediction (PDF)

Shikui Tu , Department of Computer Science and Engineering, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong
Lei Xu , Department of Computer Science and Engineering, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong
Runsheng Chen , Bioinformatics Laboratory and National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China
pp. 113-118

Network-based modeling for analyzing the human skin microbiome (PDF)

Yingzhuo Wei , Institute of Control and Information, School of Automation, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
Shaowu Zhang , Institute of Control and Information, School of Automation, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
Chunhui Zhao , Institute of Control and Information, School of Automation, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
Feng Yang , Institute of Control and Information, School of Automation, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
Quan Pan , Institute of Control and Information, School of Automation, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
pp. 119-123

SProt - from local to global protein structure similarity (PDF)

Jakub Galgonek , Department of Software Engineering, Faculty of Mathematics and Physics, Charles University in Prague, Czech Republic
David Hoksza , Department of Software Engineering, Faculty of Mathematics and Physics, Charles University in Prague, Czech Republic
pp. 124-129

SimpleTrPPI: A simple method for transferring knowledge between interaction networks for PPI prediction (PDF)

Qian Xu , Bioengineering Program, HKUST, Hong Kong, China
Derek Hao Hu , Dept. of Computer Science and Engineering, HKUST, Hong Kong, China
Qiang Yang , Dept. of Computer Science and Engineering, HKUST, Hong Kong, China
Hong Xue , Dept. of Biochemistry, HKUST, Hong Kong, China
pp. 130-135

The Apriori property of sequence pattern mining with wildcard gaps (PDF)

Fan Min , School of Computer Science and Engineering, Zhangzhou Normal University, 363000, China
Youxi Wu , School of Computer Science, Hebei University of Technology, Tianjin 300130, China
Xindong Wu , Department of Computer Science, University of Vermont, Burlington, 05405, USA
pp. 138-143

Selective estimation of least squares based predictor and efficient overhead management algorithm for lossless compression of digital mammograms (PDF)

Vinit Jakhetiya , The LNM Institute of Information Technology Jaipur, India
Nitish Kumar Boyal , The LNM Institute of Information Technology Jaipur, India
Anil Kumar Tiwari , Indian Institute of Technology, Rajasthan, Jodhpur, India
pp. 144-147

A hybridization model for tiling array analysis (PDF)

Quan Wang , Center for Theoretical Biology, Peking University, Beijing 100871, China
Linbo Wang , School of Mathematical Sciences, Peking University, Beijing 100871, China
Minping Qian , Center for Theoretical Biology, Peking University, Beijing 100871, China
Minghua Deng , Center for Theoretical Biology, Peking University, Beijing 100871, China
pp. 148-151

Temporal logics for phylogenetic analysis via model checking (PDF)

Roberto Blanco , Department of Computer Science and Systems Engineering (DIIS), Aragon Institute of Engineering Research (I3A), Universidad de Zaragoza, Spain
Gregorio de Miguel Casado , Department of Computer Science and Systems Engineering (DIIS), Aragon Institute of Engineering Research (I3A), Universidad de Zaragoza, Spain
Jose Ignacio Requeno , Department of Computer Science and Systems Engineering (DIIS), Aragon Institute of Engineering Research (I3A), Universidad de Zaragoza, Spain
Jose Manuel Colom , Department of Computer Science and Systems Engineering (DIIS), Aragon Institute of Engineering Research (I3A), Universidad de Zaragoza, Spain
pp. 152-157

Segmentation of CE videos by finding convex skin (PDF)

Balathasan Giritharan , University of North Texas, Denton 76201, USA
Sandeep Panchakarla , University of North Texas, Denton 76201, USA
Xiaohui Yuan , University of North Texas, Denton 76201, USA
pp. 158-163

Biological data classifications with LDA and SPRT (PDF)

Brittany Nkounkou , Computer Science & Engineering Department, University of Connecticut, Storrs, 06269, USA
Chih Lee , Computer Science & Engineering Department, University of Connecticut, Storrs, 06269, USA
Chun-Hsi Huang , Computer Science & Engineering Department, University of Connecticut, Storrs, 06269, USA
Colin Brown , Computer Science Department, Manchester Community College, CT06045, USA
pp. 164-168

EVOL optimer - tool for gene expression analysis (PDF)

G.L Sairam , Amrita School of Biotechnology, Amrita Vishwa Vidyapeetham University, Amritapuri, India
Asha Vijayan , Amrita School of Biotechnology, Amrita Vishwa Vidyapeetham University, Amritapuri, India
Gerald H. Lushington , Bioinformatics Core Facility, University of Kansas, 2034 Becker Drive, Lawrence, USA
Mahesh Visvanathan , Amrita School of Biotechnology, Amrita Vishwa Vidyapeetham University, Amritapuri, India
pp. 169-172

Temporal clustering of gene expression patterns using short-time segments (PDF)

Nguyen Nguyen , Dept of ECE & Comp. Engr., University of Texas at San Antonio, USA
Yufang Jin , Dept of ECE & Comp. Engr., University of Texas at San Antonio, USA
Yufei Huang , Dept of ECE & Comp. Engr., University of Texas at San Antonio, USA
Ying Ann Chiao , University of Texas Health Science Center at San Antonio, USA
Shou-Jiang Gao , University of Texas Health Science Center at San Antonio, USA
Merry Lindsey , University of Texas Health Science Center at San Antonio, USA
Yidong Chen , University of Texas Health Science Center at San Antonio, USA
pp. 173-178

Adaptive set-membership normalized least mean squares: An adaptive filter for the systems with bounded noise (PDF)

Sardar Ansari , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Kayvan Najarian , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Kevin Ward , Department of Emergency Medicine and VCURES, Virginia Commonwealth University, Richmond, USA
pp. 179-184

Cluster-based query expansion using language modeling in the biomedical domain (PDF)

Xuheng Xu , College of Information Science and Technology, Drexel University, Philadelphia, PA 19104, USA
Xiaohua Hu , College of Information Science and Technology, Drexel University, Philadelphia, PA 19104, USA
pp. 185-188

Using topic-concept based Clustering for Genomic Information Retrieval in TREC (PDF)

TengFei Jiang , Department of Computer Science, HuaZhong Normal University, WuHan China
TingTing He , Department of Computer Science, HuaZhong Normal University, WuHan China
Fang Li , National Engineering Research, Center for E-learning, WuHan China
pp. 189-192

Quantitative visualization of ChIP-chip data by using linked views (PDF)

Min-Yu Huang , Institute for Data Analysis and Visualization (IDAV), Department of Computer Science, University of California, Davis, One Shields Avenue, 95616, USA
Gunther H. Weber , Visualization Group, Lawrence Berkeley National Laboratory (LBNL), One Cyclotron Road, CA 94720, USA
Xiao-Yong Li , Genomics Divisions, Lawrence Berkeley National Laboratory (LBNL), One Cyclotron Road, CA 94720, USA
Mark D. Biggin , Genomics Divisions, Lawrence Berkeley National Laboratory (LBNL), One Cyclotron Road, CA 94720, USA
Bernd Hamann , Institute for Data Analysis and Visualization (IDAV), Department of Computer Science, University of California, Davis, One Shields Avenue, 95616, USA
pp. 195-200

Performance of DNA data embedding algorithms under substitution mutations (PDF)

David Haughton , School of Computer Science and Informatics, University College Dublin, Ireland
Felix Balado , School of Computer Science and Informatics, University College Dublin, Ireland
pp. 201-206

Extending boolean regulatory network models with answer set programming (PDF)

Timur Fayruzov , Dept. of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281 (S9), 9000, Belgium
Jeroen Janssen , Dept. of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281 (S9), 9000, Belgium
Chris Cornelis , Dept. of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281 (S9), 9000, Belgium
Dirk Vermeir , Dept. of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281 (S9), 9000, Belgium
Martine De Cock , Dept. of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281 (S9), 9000, Belgium
pp. 207-212

A weighted structural model clustering approach for identifying and analyzing core genetic regulatory modules (PDF)

Binhua Tang , College of Computer & Information, Hohai University, Jiangsu 213022, China
Su-Shing Chen , CISE and Systems Biology Lab, University of Florida, Gainesville, 32611, USA
pp. 213-216

Process Calculi for Systems Biology and applications in severe asthma (PDF)

Caroline Baroukh , Department of Computing Imperial College London, UK
Anthony Rowe , Department of Computing Imperial College London, UK
Yike Guo , Department of Computing Imperial College London, UK
pp. 217-222

CORAL-M: Heuristic coding region alignment method for multiple genome sequences (PDF)

Che-Lun Hung , Department of Computer Science and Communication Engineering, Providence University, Taiwan
Chun-Yuan Lin , Department of Computer Science and Information Engineering, Chang Gung University, Taiwan
Shih-Cheng Chang , Research Center for Emerging Viral Infections, Chang Gung University, Taiwan
Yeh-Ching Chung , Department of Computer Science, National Tsing Hua University, Taiwan
Shu Ju Hsieh , Department of Computer Science, National HsinChu Commercial and Vocational High School, Taiwan
Chuan Yi Tang , Department of Computer Science and Information Engineering, Providence University, Taiwan
Yaw-Ling Lin , Department of Computer Science and Information Engineering, Providence University, Taiwan
pp. 223-228

Integrated cellular and gene interaction model for cell migration in embryonic development (PDF)

Hien Nguyen , Department of Computer Science, New Mexico State University, Las Cruces, 88003, USA
Mingzhou Song , Department of Computer Science, New Mexico State University, Las Cruces, 88003, USA
pp. 229-233

Cellular Neural Networks, Navier-Stokes equation and microarray image reconstruction (PDF)

Bachar Zineddin , Department of Information Systems and Computing, Brunel University, London, UK
Zidong Wang , Department of Information Systems and Computing, Brunel University, London, UK
Xiaohui Liu , Department of Information Systems and Computing, Brunel University, London, UK
pp. 234-239

Analyzing genetic factors involved in recombinant protein expression enhancement (PDF)

Daniel Johnson , Arkansas State University, Jonesboro, 72467 U.S.A.
Keat Teoh , Arkansas State University, Jonesboro, 72467 U.S.A.
Cody Ashby , Arkansas State University, Jonesboro, 72467 U.S.A.
Elizabeth Hood , Arkansas State University, Jonesboro, 72467 U.S.A.
Xiuzhen Huang , Arkansas State University, Jonesboro, 72467 U.S.A.
pp. 240-245

Geometric biclustering analysis of DNA microarray data based on hypergraph partitioning (PDF)

Doris Z. Wang , Department of Electronic Engineering, City University of Hong Kong, Hong Kong
Hong Yan , Department of Electronic Engineering, City University of Hong Kong, Hong Kong
pp. 246-251

Clustering-based methodology with minimal user supervision for displaying cell-phenotype signatures in image-based screening (PDF)

William-Chandra Tjhi , Institute of High Performance Computing, Republic of Singapore
Kee Khoon Lee , Institute of High Performance Computing, Republic of Singapore
Terence Hung , Institute of High Performance Computing, Republic of Singapore
Yew Soon Ong , Nanyang Technological University, Republic of Singapore
Ivor Tsang Wai Hung , Nanyang Technological University, Republic of Singapore
Victor Racine , Institute of Molecular and Cell Biology, Republic of Singapore
Frederic Bard , Institute of Molecular and Cell Biology, Republic of Singapore
pp. 252-257

Investigating microRNA-transcription factor mediated regulatory network in glioblastoma (PDF)

Xue Gong , Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, TN 37232, USA
Peilin Jia , Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, TN 37232, USA
Zhongming Zhao , Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, TN 37232, USA
pp. 258-263

Relational database index choices for genome annotation data (PDF)

Oleksiy Karpenko , Department of Bioengineering, The University Of Illinois at Chicago, 60612, USA
Yang Dai , Department of Bioengineering, The University Of Illinois at Chicago, 60612, USA
pp. 264-268

Gene co-expression network analysis of two ovarian cancer datasets (PDF)

Shengjun Hong , State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of life Sciences and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
Hua Dong , State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of life Sciences and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
Li Jin , State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of life Sciences and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
Momiao Xiong , Human Genetics Center, University of Texas School of Public Health, Houston, 77030, USA
pp. 269-274

Mining online full-text literature for novel protein interaction discovery (PDF)

Jarvie Samuel , Dept. of CSE, Univ. of North Texas, Denton, USA
Xiaohui Yuan , Dept. of CSE, Univ. of North Texas, Denton, USA
Xiaojing Yuan , Dept. Eng. Tech, Univ. of Houston, USA
Brian Walton , Texas Heart Institute, Houston, USA
pp. 277-282

TOPPER: An algorithm for mining top k patterns in biological sequences based on regularity measurement (PDF)

Yun Xiong , Research Center for Dataology and Data Science, School of Computer Science, Fudan University, Shanghai 200433, China
Junhua He , Research Center for Dataology and Data Science, School of Computer Science, Fudan University, Shanghai 200433, China
Yangyong Zhu , Research Center for Dataology and Data Science, School of Computer Science, Fudan University, Shanghai 200433, China
pp. 283-288

Bioinformatics approaches in tuberculosis vaccination strategies by whole genome sequence (PDF)

Ai Ling Ong , Faculty of Information Science and Technology (FIST), Multimedia University, Malaysia
Chee Keong Kwoh , School of Computer Engineering, Nanyang Technological University, Singapore
pp. 289-293

Protein-protein interaction network comparison based on wavelet and principal component analysis (PDF)

Yong Luo , School of information Science and Engineering, Central South University, Changsha 410083, China
Yan Zhao , College of Science, National University of Defense Technology, Changsha 410073, China
Lei Cheng , College of Science, National University of Defense Technology, Changsha 410073, China
Ping Jiang , College of Information, National University of Defense Technology, Changsha 410073, China
Jianxin Wang , School of information Science and Engineering, Central South University, Changsha 410083, China
pp. 294-298

Testing the genomic control parameter (PDF)

Fang Liang , Beijing Institute of Genomics CAS, No.7 Bei Tu Cheng West Road, 100029, China
Jurg Ott , Beijing Institute of Genomics CAS, No.7 Bei Tu Cheng West Road, 100029, China
pp. 299-301

Multilocus association analysis under polygenic models (PDF)

Dandan Sun , Beijing Institute of Genomics CAS, No.7 Bei Tu Cheng West Road, 100029, China
Jurg Ott , Beijing Institute of Genomics CAS, No.7 Bei Tu Cheng West Road, 100029, China
pp. 302-305

P-value distribution in case-control association studies (PDF)

Zhe Liu , Beijing Institute of Genomics, CAS, China
Jurg Ott , Beijing Institute of Genomics, CAS, China
Yuanyuan Shen , Beijing Institute of Genomics, CAS, China
pp. 306-308

Detecting gene-gene interactions using support vector machines with L1 penalty (PDF)

Yuanyuan Shen , Beijing Institute of Genomics CAS, China
Zhe Liu , Beijing Institute of Genomics CAS, China
Jurg Ott , Beijing Institute of Genomics CAS, China
pp. 309-311

Selecting SNPs for pharmacogenomic association study (PDF)

Jung-Sun Park , Bioinformatics Program, Seoul National University, Korea
TaeJin Ahna , Genetic Analysis Group, Bio Lab, Samsung Advanced Institute of Technology, Suwon, Korea
Dae-Soon Son , Genetic Analysis Group, Bio Lab, Samsung Advanced Institute of Technology, Suwon, Korea
Nam Huh , Genetic Analysis Group, Bio Lab, Samsung Advanced Institute of Technology, Suwon, Korea
Kyusang Lee , Genetic Analysis Group, Bio Lab, Samsung Advanced Institute of Technology, Suwon, Korea
Taejung Bae , College of Pharmacy, Seoul National University, Korea
Kyunghee Park , Genetic Analysis Group, Bio Lab, Samsung Advanced Institute of Technology, Suwon, Korea
So-Hee Oh , Department of Statistics, Seoul National University, Korea
Ji-Hyun Lee , College of Pharmacy, Seoul National University, Korea
Kyoohyuong Rho , College of Pharmacy, Seoul National University, Korea
Sung Kim , College of Pharmacy, Seoul National University, Korea
Tae Sung Park , Bioinformatics Program, Seoul National University, Korea
pp. 312-317

A scalable method for detecting multiple loci associated with traits using TF-IDF weighting and association rule mining (PDF)

Sunwon Lee , Dept. of Graduate Program in Bioinformatics, Korea University, Seoul, Korea
Jaewoo Kang , Dept. of Computer Science and Engineering, Korea University, Seoul, Korea
Junho Oh , Dept. of Computer Science and Engineering, Korea University, Seoul, Korea
pp. 318-323

Discovery of multivariate phenotypes using association rule mining and their application to genome-wide association studies (PDF)

Sung Hee Park , Department of Bioinformatics & Life Sciences, Soongsil University, Korea
Sangsoo Kim , Department of Bioinformatics & Life Sciences, Soongsil University, Korea
pp. 324-329

A block-based evolutionary optimization strategy to investigate gene-gene interactions in genetic association studies (PDF)

Joel Fontanarosa , Bioinformatics Program, Department of Bioengineering University of Illinois at Chicago, USA
Yang Dai , Bioinformatics Program, Department of Bioengineering University of Illinois at Chicago, USA
pp. 330-335

cuGWAM: Genome-wide association multifactor dimensionality reduction using CUDA-enabled high-performance graphics processing unit (PDF)

Min-Seok Kwon , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
Kyunga Kim , Department of Statistics, Seoul National University, Korea
Sungyoung Lee , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
Taesung Park , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
pp. 336-340

Compairing quantitative trait analysis to qualitative trait analysis for complex traits disease: A genome wide association study for hyperlipidemia (PDF)

Ik-Soo Huh , Department of statistics, Seoul National University, Korea
Sohee Oh , Department of statistics, Seoul National University, Korea
Eunjin Lee , Department of statistics, Seoul National University, Korea
Taesung Park , Department of statistics, Seoul National University, Korea
pp. 341-346

Unbalanced sample size effect on the genome-wide population differentiation studies (PDF)

Kyunghee Han , Department of Statistics, Seoul National University, Korea
Kyee-zu Kim , Interdisciplinary program in Bioinformatics, Korea
Taesung Park , Department of Statistics, Seoul National University, Korea
pp. 347-352

Two-way interaction analysis of obesity trait from Korean population using generalized MDR (PDF)

Sungyoung Lee , Interdisciplinary Program in Bioinformatics, Seoul National University, 151-747, Korea
Sohee Oh , Department of Statistics, Seoul National University, 151-747, Korea
Min-Seok Kwon , Interdisciplinary Program in Bioinformatics, Seoul National University, 151-747, Korea
Seungyeoun Lee , Department of Applied Mathematics, Sejong University, 143-747, Korea
Taesung Park , Interdisciplinary Program in Bioinformatics, Seoul National University, 151-747, Korea
pp. 353-358

KAREBrowser: SNP database of Korea Association REsource project (PDF)

Chang Bum Hong , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Young Jin Kim , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Sanghoon Moon , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Young-Ah Shin , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Yoon Shin Cho , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Jong-Young Lee , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
pp. 359-361

BioSMACK: A linux Live CD for analysis of genome-wide association (PDF)

Chang Bum Hong , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Young Jin Kim , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Sanghoon Moon , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Young-Ah Shin , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Min Jin Go , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Jong-Young Lee , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
Yoon Shin Cho , Division of Structural and functional Genomics, Center for Genome Science, National Institute of Health, Seoul, Korea
pp. 362-365

Mathematical analysis of HIV dynamics: A new learning algorithm for genetic signal representation (PDF)

Amitabh Chaturvedi , School of Biotechnology, Rajiv Gandhi Proudyogiki Vishwavidyalaya (RGPV), Air port Bypass road, Bhopal- 462033, INDIA
Archana Tiwari , School of Biotechnology, Rajiv Gandhi Proudyogiki Vishwavidyalaya (RGPV), Air port Bypass road, Bhopal- 462033, INDIA
pp. 368-373

A computational framework for predicting drug Mode-of-Action (PDF)

Chifeng Ma , Department of ECE, UTSA, University of Texas at San Antonio, USA
Hung-I Harry Chen , GCCRI, UTHSCSA, University of Texas Health Science Center at San Antonio, USA
Yufei Huang , Department of ECE, UTSA, University of Texas at San Antonio, USA
Yidong Chen , GCCRI, UTHSCSA, University of Texas Health Science Center at San Antonio, USA
pp. 374-379

Incorporating miRNA target sites in protein-coding RNA (PDF)

Dimitris Papamichail , Department of Computer Science, University of Miami, Coral Gables, USA
Georgios Papamichail , Department of Informatics, New York College, Athens, Greece
pp. 380-385

Computational prediction of MicroRNA regulatory pathways (PDF)

Dong Yue , Department of Electrical and Computer Engineering, University of Texas at San Antonio, U.S.
Yidong Chen , Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, U.S.
Shou-Jiang Gao , Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, U.S.
Yufei Huang , Department of Electrical and Computer Engineering, University of Texas at San Antonio, U.S.
pp. 386-391

A composite three-stage normalization method for cDNA microarray data (PDF)

Mingjie Ma , Department of Statistics, Inha University, Incheon, Korea
Jinsoo Hwang , Department of Statistics, Inha University, Incheon, Korea
pp. 392-396

Machine science in biomedicine: Practicalities, pitfalls and potential (PDF)

T.W. Kelsey , School of Computer Science, University of St Andrews, United Kingdom
W.H.B. Wallace , Department of Reproductive and Developmental Sciences, Division of Child Life and Health, University of Edinburgh, United Kingdom
pp. 399-404

Monitoring and analysis of sleep pattern for people with early dementia (PDF)

Haiying Wang , University of Ulster, Belfast, United Kingdom
Huiru Zheng , University of Ulster, Belfast, United Kingdom
Juan C Augusto , University of Ulster, Belfast, United Kingdom
Suzanne Martin , University of Ulster, Belfast, United Kingdom
Maurice Mulvenna , University of Ulster, Belfast, United Kingdom
William Carswell , University of Ulster, Belfast, United Kingdom
Jonathan Wallace , University of Ulster, Belfast, United Kingdom
Paul Jeffers , Fold Telecare, Fold Housing Association, Belfast, United Kingdom
Barbara Taylor , Fold Telecare, Fold Housing Association, Belfast, United Kingdom
Kevin McSorley , Fold Telecare, Fold Housing Association, Belfast, United Kingdom
pp. 405-410

Evaluation of drowsiness during driving based on heart rate analysis - A driving simulation study (PDF)

Masaru Tasaki , School of Computer Science and Engineering, University of Aizu, Japan
Hui Wang , School of Computer Science and Engineering, University of Aizu, Japan
Motoaki Sakai , School of Computer Science and Engineering, University of Aizu, Japan
Mai Watanabe , School of Computer Science and Engineering, University of Aizu, Japan
Qun Jin , Media Research Institute, Waseda University, Japan
Darning Wei , School of Computer Science and Engineering, University of Aizu, Japan
pp. 411-416

U-healthcare system protecting privacy based on cloaker (PDF)

Seungjin Son , Dept. of Information and Communication Engineering, Sungkyunkwan University, Suwon, Republic of Korea
Kwangwoo Lee , Dept. of Information and Communication Engineering, Sungkyunkwan University, Suwon, Republic of Korea
Dongho Won , Dept. of Information and Communication Engineering, Sungkyunkwan University, Suwon, Republic of Korea
Seungjoo Kim , Dept. of Information and Communication Engineering, Sungkyunkwan University, Suwon, Republic of Korea
pp. 417-423

Ontology-based knowledge acquisition for neuromotor functional recovery in stroke (PDF)

Christopher Townsend , School of Computer and Information Sciences, University of South Alabama, USA
Jingshan Huang , School of Computer and Information Sciences, University of South Alabama, USA
Dejing Dou , Computer and Information Science Department, University of Oregon, USA
Haishan Liu , Computer and Information Science Department, University of Oregon, USA
Lei He , Department of Information Technology, Armstrong Atlantic State University, USA
Patrick Hayes , Florida Institute for Human and Machine Cognition, USA
Robert Rudnick , School of Computer and Information Sciences, University of South Alabama, USA
Hardik Shah , School of Computer and Information Sciences, University of South Alabama, USA
Dennis Fell , Department of Physical Therapy, University of South Alabama, USA
Wei Liu , Department of Physical Therapy, University of South Alabama, USA
pp. 424-429

Predicting pelvic trauma severity using features extracted from records and X-ray and CT images (PDF)

Simina Vasilache , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Rebecca Smith , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Jie Wu , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Pavani Davuluri , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Kevin Ward , Department of Emergency Medicine and VCURES, Virginia Commonwealth University, Richmond, USA
Kayvan Najarian , Department of Computer Science and VCURES, Virginia Commonwealth University, Richmond, USA
Charles Cockrell , Department of Radiology, Virginia Commonwealth University, Richmond, USA
pp. 430-431

Semantic characterization of hypertrophic cardiomyopathy disease (PDF)

Catia M Machado , LaSIGE, Departamento de Informática, Universidade de Lisboa, Portugal
Francisco Couto , LaSIGE, Departamento de Informática, Universidade de Lisboa, Portugal
Alexandra R Fernandes , Universidade Lusófona de Humanidades e Tecnologias, Lisboa, Portugal
Susana Santos , Universidade Lusófona de Humanidades e Tecnologias, Lisboa, Portugal
Nuno Cardim , Hospital da Luz, Lisboa, Portugal
Ana T Freitas , Instituto de Engenharia de Sistemas e Computadores, Lisboa, Portugal
pp. 432-439

A time-series approach for shock outcome prediction using machine learning (PDF)

Sharad Shandilya , Department of Computer Science and VCURES, Virginia Commonwealth University, Richmond, USA
Kevin R Ward , Department of Emergency Medicine and VCURES, Virginia Commonwealth University, Richmond, USA
Kayvan Najarian , Department of Computer Science and VCURES, Virginia Commonwealth University, Richmond, USA
pp. 440-446

Identifying inconsistencies in multiple clinical practice guidelines for a patient with co-morbidity (PDF)

Marisela Mainegra Hing , University of Ottawa, Telfer School of Management, Canada
Martin Michalowski , Adventium Labs, Minneapolis MN 55401, USA
Szymon Wilk , Poznan University of Technology, Institute of Computing Science, Poland
Wojtek Michalowski , University of Ottawa, Telfer School of Management, Canada
Ken Farion , Children Hospital of Eastern Ontario, Canada
pp. 447-452

A unified signal processing and machine learning method for detection of abnormal heart beats using Electrocardiogram (PDF)

Abed Al Raoof Bsoul , Computer Science Department, Virginia Commonwealth University (VCU), Richmond, USA
Kevin Ward , Computer Science Department, Virginia Commonwealth University (VCU), Richmond, USA
Kayvan Najarian , Computer Science Department, Virginia Commonwealth University (VCU), Richmond, USA
Soo-Yeon Ji , Department of Computer Science, Bowie State University, MD, USA
pp. 453-460

Representing clinical documents to support automatic retrieval of evidence from the Cochrane Library (PDF)

Dympna O'Sullivan , School of Engineering and Applied Science, Aston University, UK
Wojtek Michalowski , Telfer School of Management, University of Ottawa, Canada
Martin Michalowski , Adventium Labs, Minneapolis, USA
Szymon Wilk , Institute of Computing Science, Poznan University of Technology, Poland
Ken Farion , Departments of Pediatrics and Emergency Medicine, University of Ottawa, Canada
pp. 461-466

Machine learning of patient similarity: A case study on predicting survival in cancer patient after locoregional chemotherapy (PDF)

LWC Chan , Department of Health Technology and Informatics, Hong Kong Polytechnic University, China
T Chan , Department of Diagnostic Radiology, University of Hong Kong, China
LF Cheng , Department of Diagnostic Radiology, Princess Margaret Hospital, Hong Kong SAR, China
WS Mak , Department of Diagnostic Radiology, Princess Margaret Hospital, Hong Kong SAR, China
pp. 467-470

Impedance plethysmography on the arms: Respiration monitoring (PDF)

Sardar Ansari , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Ashwin Belle , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Kayvan Najarian , Department of Computer Science, Virginia Commonwealth University, Richmond, USA
Kevin Ward , Department of Emergency Medicine and VCURES, Virginia Commonwealth University, Richmond, USA
pp. 471-472

TissueWikiMobile: An integrative protein expression image browser for pathological knowledge sharing and annotation on a mobile device (PDF)

Chihwen Cheng , Electrical and Computer Engineering, Georgia Institute of Technology, USA
Todd H. Stokes , Biomedical Engineering, Georgia Institute of Technology, USA
Sovandy Hang , Biomedical Engineering, Georgia Institute of Technology, USA
May D. Wang , Electrical and Computer Engineering, Georgia Institute of Technology, USA
pp. 473-480

A multi-agent resource allocation framework for patient journey shortening (PDF)

Chung-ho Choi , Department of Computer Science, Hong Kong Baptist University, Hong Kong
William K. Cheung , Department of Computer Science, Hong Kong Baptist University, Hong Kong
pp. 481-486

Comparison of triple negative breast cancer between Asian and western data sets (PDF)

Lee H. Chen , Bioinformatics and Biostatistics Core, Research Center for Medical Excellence, National Taiwan University, Taiwan
Liang-Chuan Lai , Graduate Institute of Physiology, National Taiwan University, Taiwan
Chuhsing K. Hsiao , Department of Public Health, Institute of Epidemiology & Research Center for Gene, Environment, and Human Health, National Taiwan University, Taiwan
Pei-Chun Chen , Bioinformatics and Biostatistics Core, Research Center for Medical Excellence, National Taiwan University, Taiwan
Mong-Hsun Tsai , Institute of Biotechnology, National Taiwan University, Taiwan
Wen-Hung Kuo , Department of Surgery, National Taiwan University Hospital, Taiwan
King-Jen Chang , Department of Surgery, National Taiwan University Hospital, Taiwan
Eric Y. Chuang , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taiwan
pp. 489-493

Identification of co-occurring insertions in cancer genomes using association analysis (PDF)

Michael Steinbach , Computer Science and Eng, University of Minnesota, Minneapolis, USA
Haoyu Yu , Minn. Supercomputer Inst., University of Minnesota, Minneapolis, USA
Vipin Kumar , Computer Science and Eng, University of Minnesota, Minneapolis, USA
pp. 494-499

A model-driven classification and recursive segmentation method for automatic panel extraction from biological and medical papers (PDF)

Xiaohui Yuan , Computer Vision and Intelligent Systems Lab, Dept. of CSE, Univ. of North Texas, Denton, USA
Dongyu Ang , Computer Vision and Intelligent Systems Lab, Dept. of CSE, Univ. of North Texas, Denton, USA
pp. 500-505

Projecting partial least square and principle component regression across microarray studies (PDF)

Chi-Cheng Haung , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taiwan
Heng-Hui Lien , School of Medicine, Fu-Jen Catholic University and Cathay General hospital, Taiwan
Eric Y. Chuang , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taiwan
Shin-Hsin Tu , School of Medicine, Taipei Medical University, Taiwan
Ching-Shui Huang , Department of Surgery, Cathay General Hospital, Taiwan
Liang-Chuan Lai , Graduate Institute of Physiology, National Taiwan University, Taiwan
pp. 506-511

Position-specific deformation pattern of the nucleosome DNA revealed by principal component analysis and sequence alignment-based statistics (PDF)

Xi Yang , Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong
Hong Yan , Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong
pp. 512-517

Develop integration modeling approach for discovery neuraminidase inhibitors in silico based on pharmacophore and CoMSIA models (PDF)

Kuei-Chung Shih , Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan
Chun-Yuan Lin , Department of Computer Science and Information Engineering, Chang Gung University, Tao-Yuan, Taiwan
Jiayi Zhou , Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan
Shih-Han Huang , Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan
Chuan-Yi Tang , Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan
pp. 518-524

A novel peak alignment method for LC-MS data analysis using cluster-based techniques (PDF)

Yu-Cheng Liu , Department of Computer Science and Information Engineering, National Cheng Kung University, Taiwan, R.O.C.
Lien-Chin Chen , Institute of Information Science, Academia Sinica, Taiwan, R.O.C.
Hui-Yin Chang , Institute of Medical Informatics, National Cheng Kung University, Taiwan, R.O.C.
Hsin-Yi Wu , Department of Environmental and Occupational Health, National Cheng Kung University, Taiwan, R.O.C.
Pao-Chi Liao , Department of Environmental and Occupational Health, National Cheng Kung University, Taiwan, R.O.C.
Vincent S. Tseng , Department of Computer Science and Information Engineering, National Cheng Kung University, Taiwan, R.O.C.
pp. 525-530

Feature relation network that can identify underlying data structure for effective pattern classification (PDF)

Hai Long Zhu , Department of Computer Science, Hong Kong Baptist University, Hong Kong
Hong Qiang Wang , Institute of Intelligent Machines, Chinese Academy of Sciences, Hefei, China
pp. 531-534

Imputing missing values in microarray data with ontology information (PDF)

Andy C. Yang , Department of Computer Science & Information Engineering, Tamkang University, Taipei, Taiwan, R.O.C.
Hui-Huang Hsu , Department of Computer Science & Information Engineering, Tamkang University, Taipei, Taiwan, R.O.C.
Ming-Da Lu , Department of Computer Science & Information Engineering, Tamkang University, Taipei, Taiwan, R.O.C.
pp. 535-540

On accelerating iterative algorithms with CUDA: A case study on Conditional Random Fields training algorithm for biological sequence alignment (PDF)

Zhihui Du , Tsinghua National Laboratory for Information Science and Technology, Department of Computer Science and Technology, Tsinghua University, 100084, Beijing, China
Zhaoming Yin , School of Software and Microelectronics, Peking University, 100871, China
Wenjie Liu , Tsinghua National Laboratory for Information Science and Technology, Department of Computer Science and Technology, Tsinghua University, 100084, Beijing, China
David Bader , College of Computing, Georgia Institute of Technology, Atlanta, 30332, USA
pp. 543-548

A re-sequencing tool for high mismatch-tolerant short read alignment based on Burrows-Wheeler Transform (PDF)

Chen Hua Lu , Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan
Chun Yuan Lin , Department of Computer Science and Information Engineering, Chang Gung University, Tao-Yuan, Taiwan
Chuan Yi Tang , Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan
pp. 549-554

Peak detection on ChIP-Seq data using wavelet transformation (PDF)

Heng-Yi Wu , Department of Electrical & Computer Engineering, Biomedical Informatics Shared Resource, The Ohio State University, United State
Jie Zhang , Department of Biomedical Informatics, OSUCCC, Biomedical Informatics Shared Resource, The Ohio State University, United State
Kun Huang , Department of Biomedical Informatics, OSUCCC, Biomedical Informatics Shared Resource, The Ohio State University, United State
pp. 555-560

In search of true reads: A classification approach to next generation sequencing data selection (PDF)

Edward Wijaya , AIST, Computational Biology Research Center, 2-42 Aomi, Koutou-Ku, Tokyo 1350064, Japan
Jean-Francois Pessiot , AIST, Computational Biology Research Center, 2-42 Aomi, Koutou-Ku, Tokyo 1350064, Japan
Martin C. Frith , AIST, Computational Biology Research Center, 2-42 Aomi, Koutou-Ku, Tokyo 1350064, Japan
Wataru Fujibuchi , AIST, Computational Biology Research Center, 2-42 Aomi, Koutou-Ku, Tokyo 1350064, Japan
Kiyoshi Asai , AIST, Computational Biology Research Center, 2-42 Aomi, Koutou-Ku, Tokyo 1350064, Japan
Paul Horton , AIST, Computational Biology Research Center, 2-42 Aomi, Koutou-Ku, Tokyo 1350064, Japan
pp. 561-566

Sorting next generation sequencing data improves compression effectiveness (PDF)

Raymond Wan , Department of Computational Biology, Graduate School of Frontier Science, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa-shi, Chiba-ken, 277-8561, Japan
Kiyoshi Asai , Department of Computational Biology, Graduate School of Frontier Science, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa-shi, Chiba-ken, 277-8561, Japan
pp. 567-572

BindSDb: A binding-information spatial database (PDF)

Damian Roqueiro , Department of Bioengineering, University of Illinois at Chicago, USA
Jonna Frasor , Dept. of Physiology and Biophysics, University of Illinois at Chicago, USA
Yang Dai , Department of Bioengineering, University of Illinois at Chicago, USA
pp. 573-578

A distributed system for fast alignment of next-generation sequencing data (PDF)

Jaydeep K. Srimani , Department of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, 30332, USA
Po-Yen Wu , Department of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, 30332, USA
John H. Phan , The Wallace H. Coulter Biomedical Engineering Department, Georgia Institute of Technology and Emory University, Atlanta, 30332, USA
May D. Wang , The Wallace H. Coulter Biomedical Engineering Department, Georgia Institute of Technology and Emory University, Atlanta, 30332, USA
pp. 579-584

Methy-Pipe: An integrated bioinformatics data analysis pipeline for whole genome methylome analysis (Abstract)

Peiyong Jiang , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
Xiaoxi Sun , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
E.Z. Chen , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
Kun Sun , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
R.W.K Chiu , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
Y.M.D. Lo , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
Hao Sun , Centre for Res. into Circulating Fetal Nucleic Acids, Chinese Univ. of Hong Kong, Shatin, China
pp. 585-590

Extracting clinical information from free-text of pathology and operation notes via Chinese natural language processing (PDF)

Qiang Zeng , School of Life Science and Technology, Tongji University, Shanghai, China
Xiaoyan Zhang , School of Life Science and Technology, Tongji University, Shanghai, China
Zuofeng Li , Shanghai Centre for Bioinformation Technology, China
Lei Liu , Shanghai Centre for Bioinformation Technology, China
Weide Zhang , Department of Hepatic Tumor, Zhongshan Hospital Fudan University Shanghai, China
pp. 593-597

Syndrome differentiation of fatty liver based on the whole network analysis theory (PDF)

Shouyi Yin , Institute of Digestive Disease, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, China
Tao Liu , Institute of Digestive Disease, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, China
Huafeng Wei , Institute of Digestive Disease, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, China
Guang Ji , Institute of Digestive Disease, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, China
pp. 598-602

Goal based bisimulation for testing therapies in traditional Chinese medicine (PDF)

Guang Zheng , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Dongzhimen, Beijing 100700, China
Xiaojuan He , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Dongzhimen, Beijing 100700, China
Miao Jiang , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Dongzhimen, Beijing 100700, China
Aiping Lu , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Dongzhimen, Beijing 100700, China
pp. 603-608

Getting started in text mining to find the biological network shared with rheumatoid arthritis, coronary heart disease and diabetes mellitus (PDF)

Xiaorong Ding , Institute of Basic Research In Clinical Medicine, China Academy of Chinese Medical Sciences, Beijing, China
Aiping Lu , Institute of Basic Research In Clinical Medicine, China Academy of Chinese Medical Sciences, Beijing, China
Qinglin Zha , Data Analysis Center, Jiangxi University of Traditional Chinese Medicine, Nanchang, China
pp. 609-612

TCM health management system (PDF)

Bing Zhou , Tanggu Yongjiu Hospital, Tianjin 300450, China
Xiao-zuo Lu , Tianjin University of Traditional Chinese Medicine, 300093, China
Guang-qin Hu , Beijing Industrial University Hospital Zip: 100022, China
Jing-hua Tian , Tanggu Yongjiu Hospital, Tianjin 300450, China
Min Zhu , Tanggu Yongjiu Hospital, Tianjin 300450, China
Yang-dong Lu , Tanggu Yongjiu Hospital, Tianjin 300450, China
Qiang Liu , Tianjin University of Traditional Chinese Medicine, 300093, China
Shuli Xing , Tianjin University of Traditional Chinese Medicine, 300093, China
Hong-mei Cao , Tianjin University of Traditional Chinese Medicine, 300093, China
Li Jin , First Teaching Hospital of Tianjin University of TCM, 300193, China
pp. 613-616

Empirical study on treatment of Coronary Heart Disease with famous doctors' method of regulating spleen and stomach based on simplified point-wise mutual information (PDF)

Ping Li , The Third Hospital, Beijing University of Chinese Medicine, China
Xuezhong Zhou , Beijing Jiaotong University, China
Ronglin Gao , Guang'anmen Hospital, China Academy of Chinese Medical Sciences, Beijing, China
Sa Wu , Shanxi Chinese Medicine Hospital, Taiyuan, China
pp. 617-619

Analysis of synergistic and antagonistic effects of TCM: Cases on diabetes and insomnia (PDF)

Xuezhong Zhou , Beijing Jiaotong University, China
Martin McGrane , University of Sydney, Australia
Josiah Poon , University of Sydney, Australia
Kelvin Chan , University of Sydney, Australia
Clement Loy , University of Sydney, Australia
Simon Poon , University of Sydney, Australia
Runshun Zhang , China Academy of Chinese, Medical Sciences, Beijing, China
Baoyan Liu , China Academy of Chinese, Medical Sciences, Beijing, China
Paul Kwan , University of New England, Armidale, Australia
Daniel Sze , Hong Kong Polytechnic University, Hong Kong
Junbin Gao , Charles Sturt University, Australia
pp. 620-624

Gene selection by using an improved Fast Correlation-Based Filter (PDF)

Xue-Qiang Zeng , Computer Center, Nanchang University, 330031, China
Guo-Zheng Li , Department of Control Science & Engineering, Tongji University, Shanghai 201804, China
Su-Fen Chen , College of Information Engineering, Nanchang Institute of Technology, 330099, China
pp. 625-630

Statistical truths in traditional Chinese medicine theories (PDF)

Nevin L. Zhang , Department of Computer Science and Engineering, The Hong Kong University of Science and Technology, China
Shihong Yuan , HKU SPACE Community College, The University of Hong Kong, China
pp. 631-634

Disciplines of medicinal formulas for insomnia by data mining (PDF)

Yuehan Song , Faculty of diagnostics of Chinese Medicine, Beijing University of TCM, 100029, China
Feng Li , Faculty of diagnostics of Chinese Medicine, Beijing University of TCM, 100029, China
Jiamei Ma , Faculty of diagnostics of Chinese Medicine, Beijing University of TCM, 100029, China
Qing Tian , Faculty of diagnostics of Chinese Medicine, Beijing University of TCM, 100029, China
Jing Guan , Faculty of diagnostics of Chinese Medicine, Beijing University of TCM, 100029, China
Changhai Wang , Faculty of diagnostics of Chinese Medicine, Henan college of TCM, Zhengzhou, 450008, China
pp. 635-639

An ontology based knowledge management system architecture for Traditional Chinese Medicine (PDF)

Bai Yu , K.E. Research Center, Shenyang Aerospace University, China
Cai Dongfeng , K.E. Research Center, Shenyang Aerospace University, China
Dong Yanju , School of Computer Science, Shenyang Aerospace University, China
pp. 640-643

Multi-class feature selection using Pairwise-class and All-class techniques (PDF)

Bo Chen , School of Computer Engineering & Science, Shanghai University, 200072, China
Guo-Zheng Li , Department of Control Science & Engineering, Tongji University, Shanghai 200072, China
Mingyu You , Department of Control Science & Engineering, Tongji University, Shanghai 200072, China
pp. 644-647

Traditional Chinese Medicine data mining: Associating clinical cancer case studies with Traditional Chinese Medicine therapies (PDF)

Sushing Chen , Systems Biology Center, CISE, University of Florida, Gainesville, USA
Bairong Shen , TCM Project, Center for Systems Biology, Soochow University, Suzhou, China
Jiajia Chen , TCM Project, Center for Systems Biology, Soochow University, Suzhou, China
Yang Yang , TCM Project, Center for Systems Biology, Soochow University, Suzhou, China
Yuan Li , TCM Project, Center for Systems Biology, Soochow University, Suzhou, China
pp. 648-650

Application of random forest data mining method to the feature selection for female sub-health state (PDF)

Mei-jing Qou , Beijing University of Chinese Medicine, China
Li-min Wang , Beijing University of Chinese Medicine, China
Min Fan , Renmin University of China, China
Xin Zhao , Beijing University of Chinese Medicine, China
Hua-ting Cui , Beijing University of Chinese Medicine, China
Jia-xu Chen , Beijing University of Chinese Medicine, China
Shao-xian Wang , Beijing University of Chinese Medicine, China
Xiao-hong Li , Beijing University of Chinese Medicine, China
You-ming Jiang , Beijing University of Chinese Medicine, China
Li-qian Zhou , Beijing University of Chinese Medicine, China
Xin Peng , Beijing University of Chinese Medicine, China
pp. 651-654

Education and training of acupuncture providers affect the results of systematic reviews and meta-analyses (PDF)

En-Hua Zhou , Fudan University, Shanghai 200433, China
Huan-Gan Wu , Shanghai University of Traditional Chinese Medicine, 200030, China
Hui-Rong Liu , Shanghai University of Traditional Chinese Medicine, 200030, China
Yun Yang , University of East-West Medicine, CA 94085, USA
Guang-Hong Ding , Fudan University, Shanghai 200433, China
pp. 655-659

Immunomodulatory activity of herb-partition moxibustion on Stat3 and Stat4 in the mucosa of ulcerative colitis rats (PDF)

En-Hua Zhou , Fudan University, Shanghai University of Traditional Chinese Medicine, 200030, China
Hui-Rong Liu , Shanghai University of Traditional Chinese Medicine, 200030, China
Xiao-Mei Wang , Shanghai University of Traditional Chinese Medicine, 200030, China
Lin-Ying Tan , Shanghai University of Traditional Chinese Medicine, 200030, China
Huan-gan Wu , Shanghai University of Traditional Chinese Medicine, 200030, China
Yin Shi , Shanghai University of Traditional Chinese Medicine, 200030, China
Shi-fen Xu , Shanghai University of Traditional Chinese Medicine, 200030, China
Xiu-Di Qin , Shanghai University of Traditional Chinese Medicine, 200030, China
Wen-Yan Huang , Shanghai University of Traditional Chinese Medicine, 200030, China
pp. 660-665

Application of PCA and LDA methods on gloss recognition research in TCM complexion inspection (PDF)

Rui Zhou , Diagnosis Lab of TCM, Shanghai University of TCM, China
Fu-feng Li , Diagnosis Lab of TCM, Shanghai University of TCM, China
Yi-Qin Wang , Diagnosis Lab of TCM, Shanghai University of TCM, China
Xiao-Yan Zheng , Diagnosis Lab of TCM, Shanghai University of TCM, China
Rui-Wei Zhao , Department of Control Science & Engineering, Tongji University, Shanghai, China
Guo-Zheng Li , Department of Control Science & Engineering, Tongji University, Shanghai, China
pp. 666-669

Study on the correlation between tongue diagnosis of traditional Chinese medical and assay result of health check (PDF)

Fei Tian , Tianjin University of Traditional Chinese Medicine, China
Guangqin Hu , Tianjin University of Traditional Chinese Medicine, China
Bing Zhou , Tianjin University of Traditional Chinese Medicine, China
Xiaozuo Lu , Tianjin University of Traditional Chinese Medicine, China
Hongwu Wang , Tianjin University of Traditional Chinese Medicine, China
Chunquan Yu , Tianjin University of Traditional Chinese Medicine, China
Hongmei Cao , Tianjin University of Traditional Chinese Medicine, China
Zhihao Jiang , Tianjin University of Traditional Chinese Medicine, China
Shizhen Guo , Tianjin University of Traditional Chinese Medicine, China
pp. 670-673

Consulting study of experts' opinions on lung system disease location characteristics (PDF)

Zheng Xu , School of Basic Medicine, Nanjing University of Chinese Medicine, China
Haiyan Bao , School of Basic Medicine, Nanjing University of Chinese Medicine, China
Chengyu Wu , School of Basic Medicine, Nanjing University of Chinese Medicine, China
pp. 674-677

Deduction research on syndromes diagnosis of TCM Inquiry for Cardiovascular Diseases based on RBF nerve network (PDF)

Zhao-xia Xu , Shanghai University of Traditional Chinese Medicine, China
Yi-qin Wang , Shanghai University of Traditional Chinese Medicine, China
Guo-ping Liu , Shanghai University of Traditional Chinese Medicine, China
Jin Xu , Shanghai University of Traditional Chinese Medicine, China
Rui Guo , Shanghai University of Traditional Chinese Medicine, China
Hai-xia Yan , Shanghai University of Traditional Chinese Medicine, China
Fu-feng Li , Shanghai University of Traditional Chinese Medicine, China
Yu-jian Hong , Shanghai University of Traditional Chinese Medicine, China
Jian-jun Yan , East China University of Science and Technology, Shanghai, China
Chun-ming Xia , East China University of Science and Technology, Shanghai, China
pp. 678-681

Research and application of non-negative matrix factorization with sparseness constraint in recognition of traditional Chinese medicine pulse condition (PDF)

Rui Guo , Laboratory of information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Yiqin Wang , Laboratory of information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Haixia Yan , Laboratory of information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Fufeng Li , Laboratory of information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Zhaoxia Xu , Laboratory of information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Jianjun Yan , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai, China
pp. 682-685

The study of photoelectric facial blood flow volume Characteristic of heart blood stasis syndrome in premature coronary heart disease and the relations between it and TXB2, 6-K-PGF1α (PDF)

Zhi-xi Hu , Hunan University of Traditional Chinese Medicine, Changsha, China
Jing-hui Zheng , Hunan University of Traditional Chinese Medicine, Changsha, China
pp. 686-689

Procedure recording and telediagnosis of pulse diagnosis in Traditional Chinese Medicine (PDF)

Bingyi Hu , Dept. of Biomedical Engineering, Beijing Jiaotong University, China
Lu Xu , Dept. of Biomedical Engineering, Beijing Jiaotong University, China
Ao Tong , Dept. of Biomedical Engineering, Beijing Jiaotong University, China
Yan Zhao , Dept. of Biomedical Engineering, Beijing Jiaotong University, China
Xu Zhang , Dept. of Biomedical Engineering, Beijing Jiaotong University, China
pp. 690-693

Application of Bayesian network in information fusion analysis of four diagnostic methods of traditional Chinese medicine (PDF)

Wenjie Xu , Laboratory of Four Diagnostic Information of TCM, Shanghai University of TCM, China
Yiqin Wang , Laboratory of Four Diagnostic Information of TCM, Shanghai University of TCM, China
Zhaoxia Xu , Laboratory of Four Diagnostic Information of TCM, Shanghai University of TCM, China
Chunfeng Chen , Laboratory of Four Diagnostic Information of TCM, Shanghai University of TCM, China
Xiaojuan Zou , Basic Medical College, Hubei University of TCM, Wuhan, China
pp. 694-697

Study on intelligent syndrome differentiation in Traditional Chinese Medicine based on information fusion technology (PDF)

Yiqin Wang , School of Basic Medicine, Shanghai University of TCM, China
Rui Guo , Center for information of TCM, Shanghai University of TCM, China
Haixia Yan , School of Basic Medicine, Shanghai University of TCM, China
Fufeng Li , Center for teaching experience, Shanghai University of TCM, China
Chunming Xia , Center for Mechatronics Engineering, East China University of Science & Technology, Shanghai, China
Zhaoxia Xu , School of Basic Medicine, Shanghai University of TCM, China
Jin Xu , School of Basic Medicine, Shanghai University of TCM, China
pp. 698-702

The construction of the Traditional Chinese Medicine four seasons five viscera system calculation Model (PDF)

Xiaoxiang Guan , Faculty of Chinese Medicine, Macau University of Science and Technology, Taipa, China
Yonghua Zhao , Faculty of Chinese Medicine, Macau University of Science and Technology, Taipa, China
Zhijin Guan , College of Computer Science & Technology, Nantong University, China
Shanli Chen , College of Computer Science & Technology, Nantong University, China
pp. 703-706

Analysis of sound signal of five internal organs based on wavelet packet (PDF)

Jianjun Yan , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Siyuan Mao , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Chunming Xia , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Chao Wang , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Yiqin Wang , Center for TCM information science and technology, Shanghai University of TCM, 201203, China
Fufeng Li , Center for TCM information science and technology, Shanghai University of TCM, 201203, China
Rui Guo , Center for TCM information science and technology, Shanghai University of TCM, 201203, China
Chunfeng Chen , Center for TCM information science and technology, Shanghai University of TCM, 201203, China
Haixia Yan , Center for TCM information science and technology, Shanghai University of TCM, 201203, China
pp. 707-711

On classification compatibility laws of Zhongjing prescriptions (PDF)

Xuemei Yang , Fujian University of Traditional Chinese Medicine, Fuzhou, China
Xinmei Lai , Fujian University of Traditional Chinese Medicine, Fuzhou, China
Candong Li , Fujian University of Traditional Chinese Medicine, Fuzhou, China
pp. 712-716

Research on proteins in tongue coating in patients with chronic renal failure and chronic gastritis based on SELDI-TOF-MS technique (PDF)

Yiming Hao , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Yawei Cheng , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Lei He , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Peng Qian , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Fufeng Li , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Yiqin Wang , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Wenjing Wang , Department of Molecular Biology for Public Health, Shanghai Municipal Center for Disease Control & Prevention, 200336, China
pp. 717-721

Studying herb-herb interaction for insomnia through the theory of complementarities (PDF)

Xuezhong Zhou , Beijing Jiaotong University, China
Josiah Poon , University of Sydney, Australia
Dawei Yin , University of Sydney, Australia
Kelvin Chan , University of Sydney, Australia
Clement Loy , University of Sydney, Australia
Simon Poon , University of Sydney, Australia
Runshun Zhang , Guanganmen Hospital, Beijing, China
Baoyan Liu , China Academy of Chinese Medical Sciences, Beijing, China
Paul Kwan , University of New England, Armidale, Australia
Daniel Sze , Hong Kong Polytechnic University, Hong Kong
Junbin Gao , Charles Sturt University, Bathurst, Australia
pp. 722-726

Study about the feature of some parts of the Traditional Chinese Medicine(TCM) physical examination correlate with the indexes of the renal function (PDF)

Hu Guangqin , University Hospital, Beijing University of Technology, China
Lu Xiaozuo , Institute of Chinese Medicine, Tianjin University of Traditional Chinese Medicine, China
Zhou Bing , Tianjin yongjiu hospital, China
Luo Yufu , Tianjin yongjiu hospital, China
Lu Yangdong , Tianjin yongjiu hospital, China
Zhu Min , Tianjin yongjiu hospital, China
Liu Xiaomin , Signal and Information Processing Lab, Beijing University of Technology, China
pp. 727-729

Research of features in the pulse waves of women during pregnancy (PDF)

Nanyue Wang , Experimental Research Center of China Academy of Chinese Medical Sciences, China
Youhua Yu , Experimental Research Center of China Academy of Chinese Medical Sciences, China
Dawei Huang , Basic Science Institute of Bell Lab (China)
Zengyu Shan , Experimental Research Center of China Academy of Chinese Medical Sciences, China
Yan Chen , Experimental Research Center of China Academy of Chinese Medical Sciences, China
Tongda Li , Experimental Research Center of China Academy of Chinese Medical Sciences, China
Xiaoou Xue , Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine, China
Yan Gao , Huairou Maternity and Child Health Hospital, Beijing, China
Yanping Chen , Experimental Research Center of China Academy of Chinese Medical Sciences, China
Wanfeng Fu , Huairou Maternity and Child Health Hospital, Beijing, China
pp. 730-732

Attribute weighting with probability estimation trees for improving probability-based ranking in liver diagnosis (PDF)

Na Chu , Dept. of Computer Science & Engineering, Shanghai Jiaotong University, China
Lizhuang Ma , Dept. of Computer Science & Engineering, Shanghai Jiaotong University, China
Min Zhou , Center of Traditional Chinese Medicine Information Science and Technology, Shanghai University of T.C.M., China
Yiyang Hu , Center of Traditional Chinese Medicine Information Science and Technology, Shanghai University of T.C.M., China
Ping Liu , Center of Traditional Chinese Medicine Information Science and Technology, Shanghai University of T.C.M., China
Zhiying Che , Center of Traditional Chinese Medicine Information Science and Technology, Shanghai University of T.C.M., China
pp. 733-739

Relation between arterial elastic characteristic and time-domain parameters of pulse waveform in Traditional Chinese Medicine (PDF)

Haixia Yan , School of Basic Medicine, Shanghai University of TCM, China
Yiqin Wang , School of Basic Medicine, Shanghai University of TCM, China
Rui Guo , Center for information of TCM, Shanghai University of TCM, China
Fufeng Li , Center for teaching experience, Shanghai University of TCM, China
Yujian Hong , School of Basic Medicine, Shanghai University of TCM, China
Fengying Yun , School of Basic Medicine, Shanghai University of TCM, China
Yuci Yang , School of Basic Medicine, Shanghai University of TCM, China
Yiming Hao , School of Basic Medicine, Shanghai University of TCM, China
Jianjun Yan , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai, China
pp. 740-744

Analysis of 903 voice signals of patients with five organs illness and normal persons in traditional Chinese medicine auscultation (PDF)

Chunfeng Chen , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Yiqin Wang , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Rui Guo , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Wenjie Xu , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, 201203, China
Jianjun Yan , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Siyuan Mao , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Yong Shen , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
Xiaojing Shen , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
pp. 745-748

Strategies to enhance computer assisted differential diagnosis in Traditional Chinese Medicine for Coronary Heart Disease: Validity and standardisation of a diagnostic instrument (PDF)

Laura Duck , College of Health and Science, University of Western Sydney, Australia
Xiaoshu Zhu , College of Health and Science, University of Western Sydney, Australia
Stefania Penkala , College of Health and Science, University of Western Sydney, Australia
Anthony Maeder , College of Health and Science, University of Western Sydney, Australia
pp. 749-753

Correlation between TCM inspection of facial color and pulmonary function of Bronchial Asthma (PDF)

Connie Yukkin Hung , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, China
Zhaoxia Xu , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, China
Yiqin Wang , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, China
Fufeng Li , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, China
Haixia Yan , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, China
Yuci Yang , Laboratory of Four Diagnostic Information of TCM, Shanghai University of Traditional Chinese Medicine, China
pp. 754-757

Study on the principle of treatment, medicine and formula of Chinese Medicine in congestive heart failure based on literature review and data mining technology (PDF)

Rui-jing Luo , Shanghai University of Traditional Chinese Medicine, 201203, China
Long Teng , Shanghai University of Traditional Chinese Medicine, 201203, China
Jian-cheng He , Shanghai University of Traditional Chinese Medicine, 201203, China
Hui Wang , Shanghai University of Traditional Chinese Medicine, 201203, China
Xue-bin Cao , 252 Hospital of People ' s Liberation Army, Baoding Hebei 071000, China
Yuan-hui Hu , Guanng anmen Hospital, China Academy of Chinese Medical Sciences, Beijing 100053, China
pp. 758-762

Metabonomics studies on urine specimens from patients with chronic renal failure (PDF)

Qian Peng , Laboratory of Syndromes of Traditional Chinese Medicine, Shanghai University of Traditional Chinese Medicine, China
Bai Guanfeng , Laboratory of Syndromes of Traditional Chinese Medicine, Shanghai University of Traditional Chinese Medicine, China
Zhao Jie , Laboratory of Syndromes of Traditional Chinese Medicine, Shanghai University of Traditional Chinese Medicine, China
Wang Yiqin , Laboratory of Syndromes of Traditional Chinese Medicine, Shanghai University of Traditional Chinese Medicine, China
pp. 763-768

Design of the workstation for hand rehabilitation based on data glove (PDF)

Hao Chen , School of Information Technology, Guangzhou University of Chinese Medicine, China
Qingxiang Wang , School of Information Technology, Guangzhou University of Chinese Medicine, China
Lixing Cao , Guangdong Provincial Hospital of Chinese Medicine, China
pp. 769-771

Application of the support vector machine to the identification of human pulse signals (PDF)

Kunbao Cai , College of Communication Engineering, Chongqing University, China
Xiaoming Wen , College of Communication Engineering, Chongqing University, China
Yunzi Duan , Drug Dependence Rehabilitation Center, Chongqing Mental Hospital, China
pp. 772-776

The ideas and methods in studying pulse width of traditional Chinese medicine (PDF)

Cong-ying Liu , Shanghai University of Traditional Chinese Medicine, China
Gai-rong Fan , Shanghai University of Traditional Chinese Medicine, China
Wei-chang Tang , Shanghai University of Traditional Chinese Medicine, China
pp. 777-780

Research on the three-region multipath pulse detecting system (PDF)

Wei-chang Tang , Shanghai University of Traditional Chinese Medicine, China
Cong-ying Liu , Shanghai University of Traditional Chinese Medicine, China
Yu-ping Zhao , Shanghai University of Traditional Chinese Medicine, China
Gai-rong Fan , Shanghai University of Traditional Chinese Medicine, China
pp. 781-784

Symptom selection of inquiry diagnosis data for coronary heart disease in Traditional Chinese Medicine by using social network techniques (PDF)

Ya-Lei Wang , The Key Laboratory of Embedded System and Service Computing, Ministry of Education, Department of Control Science & Engineering, Tongji University, Shanghai, China
Guo-Zheng Li , The Key Laboratory of Embedded System and Service Computing, Ministry of Education, Department of Control Science & Engineering, Tongji University, Shanghai, China
Wei-Sheng Xu , The Key Laboratory of Embedded System and Service Computing, Ministry of Education, Department of Control Science & Engineering, Tongji University, Shanghai, China
Guo-Ping Liu , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Yi-Qin Wang , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
pp. 785-789

Association analysis and distribution of chronic gastritis syndromes based on associated density (PDF)

Guo-Ping Liu , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Yi-Qin Wang , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Fu-Feng Li , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Hai-Xia Yan , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Jing-Jing Fu , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Jie Zhao , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Shanghai University of Traditional Chinese Medicine, China
Rui-Wen Zhen , Department of Control Science & Engineering, Tongji University, Shanghai, China
Shi-Xing Yan , Department of Control Science & Engineering, Tongji University, Shanghai, China
Guo-Zheng Li , Department of Control Science & Engineering, Tongji University, Shanghai, China
pp. 790-794

The application of Stata11.0 in clinical evaluation of traditional Chinese medicine (PDF)

Ying Dong , Department of Preventive Medicine, Shanghai University of Traditional Chinese Medicine, China
Pin-xian Huang , Department of Preventive Medicine, Shanghai University of Traditional Chinese Medicine, China
Guo-ping Liu , Laboratory of Syndromes of Traditional Chinese Medicine, Shanghai University of Traditional Chinese Medicine, China
Yi-qin Wang , Laboratory of Syndromes of Traditional Chinese Medicine, Shanghai University of Traditional Chinese Medicine, China
pp. 795-799

Fine-scale stratification analysis of Hong Kong Chinese population (PDF)

Yu-Qing Qiu , Department of Chemical Pathology, The Chinese University of Hong Kong, China
Ronald C.W. Ma , Department of Medicine & Therapeutics, The Chinese University of Hong Kong, China
Brian Tomlinson , Department of Medicine & Therapeutics, The Chinese University of Hong Kong, China
Juliana C.N. Chan , Department of Medicine & Therapeutics, The Chinese University of Hong Kong, China
Larry Baum , School of Pharmacy, The Chinese University of Hong Kong, China
Ting-Fan Leung , Department of Paediatrics, The Chinese University of Hong Kong, China
Nelson L.S. Tang , Department of Chemical Pathology, KIZ/CUHK Joint Laboratory of Bioresources and Molecular Research in Common Diseases, The Chinese University of Hong Kong, China
pp. 802-804

Transduced Tat-DJ-1 protein protects against oxidative stress-induced SH-SY5Y cells death and Parkinson disease mouse model (PDF)

Tae-Cheon Kang , Department of Anatomy, and Neurobiology, College of Medicine, Hallym University, Chunchon 200-702, Korea
Min Jea Shin , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Eun Jeong Sohn , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Hye Ri Kim , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Duk-Soo Kim , Department of Anatomy, College of Medicine, Soonchunhyang University, Cheonan-Si 330-090, Korea
Hoon Jae Jeong , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Sung-Woo Cho , Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine, Seoul 138-736, Korea
Dae Won Kim , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Jinseu Park , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Won Sik Eum , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Soo Young Choi , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
pp. 805

Positional preferences by 20 amino acids in beta sheets (PDF)

Hossein Fallahi , Dep. Of Biology, Razi University, Kermanshah, I.R of Iran
Reza Yarani , Dep. Of Biology, Razi University, Kermanshah, I.R of Iran
pp. 806-807

Enhances the transdcution efficiency of Tat-catalase protein attenuate neuronal cell damage (PDF)

Hyun Sook Hwang , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Eun Jeong Sohn , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Eun Hee Ahn , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Soon Won Kwon , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Jae Jin An , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Dae Won Kim , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Mi Jin Kim , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Soon Sung Lim , Department of Food Science and Nutrition, Hallym University, Chunchon 200-702, Korea
Duk-Soo Kim , Department of Anatomy, College of Medicine, Soonchunhyang University, Cheonan-Si 330-090, Korea
Kyu Hyung Han , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Jinseu Park , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Won Sik Eum , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
Soo Young Choi , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Korea
pp. 808

PEP-1-Peroxiredoxin protein efficiently protects Raw 264.7 cells from lipopolysaccharide (LPS)-induced inflammation (PDF)

Hyeok Yil Kwon , Department of Physiology, College of Medicine, Hallym University, Chunchon 200-702, Korea
Mi Jin Kim , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Hye Won Kang , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Soon Won Kwon , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Su Jung Woo , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Duk-Soo Kim , Department of Anatomy, College of Medicine, Soonchunhyang University, Cheonan-Si 330-090, Korea
Hoon Jae Jeong , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Kil Soo Lee , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Dae Won Kim , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Jinseu Park , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Won Sik Eum , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
Soo Young Choi , Department of Biomedical Science and Research Institute of Bioscience and Biotechnology, Hallym University, Chunchon 200-702, Korea
pp. 809

Infinite latent process decomposition (PDF)

Tomonari Masada , Department of Computer and Information Sciences, Nagasaki University, Japan
Yuichiro Shibata , Department of Computer and Information Sciences, Nagasaki University, Japan
Kiyoshi Oguri , Department of Computer and Information Sciences, Nagasaki University, Japan
pp. 810-811

Modeling and formal verification of biological regulatory networks: An integrative approach (PDF)

Pedro T. Monteiro , IST/INESC-ID, Lisbon, Portugal
Ana T. Freitas , IST/INESC-ID, Lisbon, Portugal
Delphine Ropers , INRIA Grenoble - Rhône-Alpes, France
Radu Mateescu , INRIA Grenoble - Rhône-Alpes, France
Hidde de Jong , INRIA Grenoble - Rhône-Alpes, France
pp. 812-813

Identification of relevant subpathways from molecular pathways in gene expression data by a probabilistic approach (PDF)

Seungyoon Nam , Supercomputing Center, Korea Institute of Science and Technology Information, Daejeon, Republic of Korea
pp. 814

Network modeling of RNA secondary structures based on integrative randomized clustering (PDF)

Shang Gao , Department of Computer Science, University of Calgary, Alberta, Canada
Reda Alhajj , Department of Computer Science, University of Calgary, Alberta, Canada
Jon Rokne , Department of Computer Science, University of Calgary, Alberta, Canada
pp. 815-816

A new evaluation measure of diagnostic tests based on modified area under the receiver operating characteristic curve (PDF)

Wenbao Yu , Department of Statistics, Chonnam National University, Gwangju, South Korea
Eunsik Park , Department of Statistics, Chonnam National University, Gwangju, South Korea
Yuan-chin Chang , Institute of Statistical Science, Academia Sinica, Taipei, Taiwan
pp. 817-818

Maximum likelihood and polynomial system solving (PDF)

Kim Batselier , Department of Electrical Engineering (ESAT), SCD, Katholieke Universiteit Leuven, 3001, Belgium
Bart De Moor , Department of Electrical Engineering (ESAT), SCD, Katholieke Universiteit Leuven, 3001, Belgium
pp. 819-820

NeuMORE: Ontology in stroke recovery (PDF)

Christopher Townsend , School of Computer and Information Sciences, University of South Alabama, USA
Jingshan Huang , School of Computer and Information Sciences, University of South Alabama, USA
Dejing Dou , Computer and Information Science Department, University of Oregon, USA
Haishan Liu , Computer and Information Science Department, University of Oregon, USA
Lei He , Department of Information Technology, Armstrong Atlantic State University, USA
Patrick Hayes , Florida Institute for Human and Machine Cognition, USA
Robert Rudnick , School of Computer and Information Sciences, University of South Alabama, USA
Hardik Shah , School of Computer and Information Sciences, University of South Alabama, USA
Dennis Fell , Department of Physical Therapy, University of South Alabama, USA
Wei Liu , Department of Physical Therapy, University of South Alabama, USA
pp. 821-822

Genome-wide linkage and association analyses for the fasting glucose level in Korean population including monozygotic twins (PDF)

Young Ju Suh , School of Medicine, Inha University and Inha University Hospital, Incheon, Korea
Sung Hwan Kim , School of Medicine, Inha University and Inha University Hospital, Incheon, Korea
Moonsuk Nam , School of Medicine, Inha University and Inha University Hospital, Incheon, Korea
So Hun Kim , School of Medicine, Inha University and Inha University Hospital, Incheon, Korea
Hangseok Choi , Biostatistics Team, Samsung Biomedical Research Institute, Seoul, Korea
Joohon Sung , School of Public Health, Seoul National University, Korea
pp. 823-824

NWE: Node-weighted expansion for protein complex prediction using random walk distances (PDF)

Osamu Maruyama , Faculty of Mathematics and Graduate School of System Life Sciences, Kyushu University, Fukuoka, Japan
Ayaka Chihara , Graduate School of Systems Life Sciences, Kyushu University, Fukuoka, Japan
pp. 825-826

Correction of copy number variation data using principal component analysis (PDF)

Jiayu Chen , Dept. of Electrical Engineering, University of New Mexico, Albuquerque, USA
Jingyu Liu , Dept. of Electrical Engineering, University of New Mexico, Albuquerque, USA
Vince D. Calhoun , Dept. of Electrical Engineering, University of New Mexico, Albuquerque, USA
pp. 827-828

The decision to live or die in response to DNA damage controlled by differential regulation of p53 pathway dynamics (PDF)

Xi Chen , Center for Quantitative Systems Biology and Department of Physics, Hong Kong Baptist University, Hong Kong
Jue Shi , Center for Quantitative Systems Biology and Department of Physics, Hong Kong Baptist University, Hong Kong
pp. 829-830

Using computational method to identify the binding site of 8R-lipoxygenase for arachidonic acid (PDF)

Tianchuan Du , Department of Computer Science, Southern University, Baton Rouge, LA 70813, USA
Neelima Rama , Department of Computer Science, Southern University, Baton Rouge, LA 70813, USA
Shuju Bai , Department of Computer Science, Southern University, Baton Rouge, LA 70813, USA
Ebrahim Khosravi , Department of Computer Science, Southern University, Baton Rouge, LA 70813, USA
pp. 831-832

Modeling of glucose transport in skeletal muscle (PDF)

Dayu Lv , Department of Aerospace and Mechanical Engineering, University of Notre Dame, IN 46556, USA
Bill Goodwine , Department of Aerospace and Mechanical Engineering, University of Notre Dame, IN 46556, USA
pp. 833

Structural analysis of heme proteins: Implication for design and prediction (PDF)

Ting Li , Cannon Research Center, Carolinas Medical Center, Charlotte, NC USA
Herbert L. Bonkovsky , Cannon Research Center, Carolinas Medical Center, Charlotte, NC USA
Jun-tao Guo , Department of Bioinformatics and genomics, University of North Carolina at Charlotte, USA
pp. 834-835

Network profiling analysis for generating modulator-dependent gene networks (PDF)

Teppei Shimamura , Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, 108-8639, Japan
Seiya Imoto , Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, 108-8639, Japan
Atsushi Niida , Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, 108-8639, Japan
Masao Nagasaki , Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, 108-8639, Japan
Rui Yamaguchi , Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, 108-8639, Japan
Satoru Miyano , Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, 108-8639, Japan
pp. 836

Development of a pathway comparison tool for analysis of bacteria genomes (PDF)

Haizhou Liu , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Jun Wang , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Chao Zhuang , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Na Han , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Bo Wei , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Simon Rayner , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
pp. 837-838

MiRPara: A SVM-based software for prediction of mature miRNAs (PDF)

Yonggan Wu , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Bo Wei , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Haizhou Liu , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Na Han , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
Simon Rayner , Bioinformatics Group, State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Science, 430071, China
pp. 839-840

Early stage evolution in metabolic related protein interaction network (PDF)

Jea Woon Ryu , Department of Biochemistry, Chungbuk National University, Cheongju, Republic of Korea
Hak Yong Kim , Department of Biochemistry, Chungbuk National University, Cheongju, Republic of Korea
pp. 841-842

Transcriptional regulation of drug target proteins from cancer related disease network (PDF)

Byeolna Park , Department of Biochemistry, Chungbuk National University, Cheongju, Republic of Korea
Yoon Kyeong Lee , Appleteck Co., Ltd., Cheongju, Republic of Korea
Hak Yong Kim , Department of Biochemistry, Chungbuk National University, Cheongju, Republic of Korea
pp. 843-844

Similarity search and posttranslational modifications in tandem mass spectra (PDF)

Jiri Novak , Department of Software Engineering, Faculty of Mathematics and Physics, Charles University in Prague, Malostranské nám. 25, 118 00, Czech Republic
David Hoksza , Department of Software Engineering, Faculty of Mathematics and Physics, Charles University in Prague, Malostranské nám. 25, 118 00, Czech Republic
pp. 845-846

Computational model of VEGF, thrombin and histamine signalling network (PDF)

Xiaona Wei , Singapore-MIT Alliance, National University of Singapore, Singapore 117576
Yuzong Chen , Department of Pharmacy Department of Pharmacy and Center of Computational Science and Engineering, National University of Singapore, Singapore 117576
pp. 847-848

GPU acceleration of simulation tool for lipid-bilayers (PDF)

Ardita Shkurti , Control and Computer Engineering Department, Politecnico di Torino, Italy
Andrea Acquaviva , Control and Computer Engineering Department, Politecnico di Torino, Italy
Elisa Ficarra , Control and Computer Engineering Department, Politecnico di Torino, Italy
Enrico Macii , Control and Computer Engineering Department, Politecnico di Torino, Italy
Mario Orsi , School of Chemistry, University of Southampton, United Kingdom
Martino Ruggiero , Electronics, Computer Engineering and Systems Department, Università di Bologna, Italy
pp. 849-850

Algorithm for DNA sequence compression based on prediction of mismatch bases and repeat location (PDF)

Kalyan Kumar Kaipa , SAIT India Lab, Samsung, Bangalore, India
Ajit S Bopardikar , SAIT India Lab, Samsung, Bangalore, India
Srikantha Abhilash , SAIT India Lab, Samsung, Bangalore, India
Parthasarathy Venkataraman , SAIT India Lab, Samsung, Bangalore, India
Kyusang Lee , SAIT, Samsung Electronics Co. Ltd., Suwon, Korea
Taejin Ahn , SAIT, Samsung Electronics Co. Ltd., Suwon, Korea
Rangavittal Narayanan , SAIT India Lab, Samsung, Bangalore, India
pp. 851-852

System for random access DNA sequence compression (PDF)

Kalyan Kumar Kaipa , Samsung India Software Operations, Bangalore, India
Kyusang Lee , SAIT, Samsung Electronics Co. Ltd., Korea
Taejin Ahn , Samsung Electronics Co. Ltd., Korea
Rangavittal Narayanan , Samsung India Software Operations, Bangalore, India
pp. 853-854

Genome-wide DNA methylation analysis in tumor and normal tissues from lung squamous cell carcinoma and serous cystadenocarcinoma (PDF)

Hidenori Inaoka , School of Allied Health Sciences, Kitasato University, Kanagawa, Japan
Makoto Noshiro , School of Allied Health Sciences, Kitasato University, Kanagawa, Japan
Yutaka Fukuoka , School of Biomedical Science, Tokyo Medical and Dental University, Japan
pp. 855-856

Effects of cyclic stretch on early response gene expressions in normal human pulmonary artery endothelial cells in vitro (PDF)

Kozue Kobayashi , Graduate School of Medical Science, Kitasato University, Kanagawa, Japan
Masumi Tanaka , School of Medicine, Kitasato University, Kanagawa, Japan
Hidenori Inaoka , Graduate School of Medical Science, Kitasato University, Kanagawa, Japan
Satoru Nebuya , Graduate School of Medical Science, Kitasato University, Kanagawa, Japan
Kenichi Kokubo , Graduate School of Medical Science, Kitasato University, Kanagawa, Japan
Yutaka Fukuoka , Graduate School of Biomedical Science, Tokyo Medical and Dental University, Japan
Hirosuke Kobayashi , Graduate School of Medical Science, Kitasato University, Kanagawa, Japan
Makoto Noshiro , Graduate School of Medical Science, Kitasato University, Kanagawa, Japan
pp. 857-858

A smart-walk system for various kinds of handicapped (PDF)

J. Y. Lee , Department of Computer Industrial Design, Korea National Collage of Rehabilitation & Welfare, Pyeongtaek City, Gyunggi, South Korea
K. H. Lee , Department of MIS, u-BIZ BK21, Chungbuk National University, Cheongju City, South Korea
Y. J. Kang , Department of MIS, u-BIZ BK21, Chungbuk National University, Cheongju City, South Korea
W. S. Cho , Department of MIS, u-BIZ BK21, Chungbuk National University, Cheongju City, South Korea
H. S. Ryoo , Law School, Chungbuk National University, Cheongju City, South Korea
pp. 859-860

Sequence composition analysis on arsenic-binding proteins in human cells (PDF)

Yi-An Tung , Department of Bio-Industrial Mechatronics Engineering, National Taiwan University, Taipei 106, Taiwan
Yu-Ying Chang , Department of Life Science, National Central University, Jhongli, Taoyuan 320, Taiwan
Rong-Nan Huang , Department of Entomology, National Taiwan University, Taipei 106, Taiwan
Chien-Yu Chen , Department of Bio-Industrial Mechatronics Engineering, National Taiwan University, Taipei 106, Taiwan
pp. 861

Trace of evolutionary evidence by analyzing clustering information of metabolic pathways in eukaryotes (PDF)

Arang Rhie , Bioinformatics lab, CSE, Ewha Womans University, Seoul, Republic of Korea
Myungha Jang , Bioinformatics lab, CSE, Ewha Womans University, Seoul, Republic of Korea
Hyun-Seok Park , Bioinformatics lab, CSE, Ewha Womans University, Seoul, Republic of Korea
pp. 862-863

Mining molecular interactions from scientific literature using cloud computing (PDF)

Franco Nazareno , Department of Bio and Information Technology, Chungbuk National University, Cheongju City, South Korea
Kyung-Hee Lee , Department of Management Information Systems, u-BIZ BK21, Chungbuk National University, Cheongju City, South Korea
Wan-Sup Cho , Department of Management Information Systems, u-BIZ BK21, Chungbuk National University, Cheongju City, South Korea
pp. 864-865

Multi-resolution tile-based follicle detection using color and textural information of follicular lymphoma IHC slides (PDF)

Jing Han , Informatics Institute, University of Missouri, Columbia, USA
Dmitriy V. Shin , Informatics Institute, University of Missouri, Columbia, USA
Gerald L. Arthur , Pathology & Anatomical Science, University of Missouri, Columbia, USA
Chi-Ren Shyu , Informatics Institute, University of Missouri, Columbia, USA
pp. 866-867

A genomic datawarehouse model for fast manipulation using repeat region (PDF)

Arang Rhie , Bioinformatics Lab, CSE, Ewha Womans University, Seoul, Korea
Kyungeun Lee , Bioinformatics Lab, CSE, Ewha Womans University, Seoul, Korea
Hyun-Seok Park , Bioinformatics Lab, CSE, Ewha Womans University, Seoul, Korea
pp. 868-869

Mitochondrial protein cleavage site predictor (PDF)

Yoshinori Fukasawa , The University of Tokyo, Graduate School of Frontier Sciences, Japan
Raymond Wan , The University of Tokyo, Graduate School of Frontier Sciences, Japan
Szu-Chin Fu , The University of Tokyo, Graduate School of Frontier Sciences, Japan
Junko Tsuji , The University of Tokyo, Graduate School of Frontier Sciences, Japan
Noriyuki Sakiyama , Computational Biology Research Center, Japan
Kenichiro Imai , Computational Biology Research Center, Japan
Paul Horton , The University of Tokyo, Graduate School of Frontier Sciences, Japan
pp. 870-871

microDoR for HUMAN: A web server to predict mode of miRNA-mediated gene silencing (PDF)

Lei Cheng , Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, 210016 China
Tao Zhou , Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, 210029, China
Xuejiang Guo , Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, 210029, China
Xiaofeng Song , Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, 210016 China
Xiaobai Zhang , Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, 210016 China
Ping Han , The First Hospital affiliated to Nanjing Medical University, 210029 China
Yi-ping Phoebe Chen , Department of Computer Science and Computer Engineering, La Trobe University, Victoria 3086, Melbourne, Australia
Jiahao Sha , Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, 210029, China
pp. 872-873

A new PDS PORTAL for Clinical TeleGaming rehabilitation and intervention (PDF)

Carl Taswell , Global TeleGenetics, Ladera Ranch, CA, USA
pp. 874-875

Spectral analysis of numerical exon and intron sequences (PDF)

Jennifer Yin Yee Kwan , Department of Laboratory Medicine & Pathobiology, University of Toronto, Ontario, Canada M5S 1A8
Benjamin Yin Ming Kwan , Faculty of Medicine, University of Ottawa, Ontario, Canada K1H 8MS
Hon Keung Kwan , Department of Electrical & Computer Engineering, University of Windsor, Ontario, Canada N9B 3P4
pp. 876-877
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