The Community for Technology Leaders
2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (2016)
Shenzhen, China
Dec. 15, 2016 to Dec. 18, 2016
ISBN: 978-1-5090-1612-9
TABLE OF CONTENTS

Cover page (PDF)

pp. c1

Preface (PDF)

Yadong Wang , Harbin Institute of Technology, China
Kevin Burrage , Queensland University of Technology, Australia/University of Oxford, UK
Yunlong Liu , Harbin Engineering University, China
Shinichi Morishita , University of Tokyo, Japan
Tianhai Tian , Monash University, Australia
Qinghua Jiang , Harbin Institute of Technology, China
Jiangning Song , Monash University, Australia
Guohua Wang , Harbin Institute of Technology, China
Qian Zhu , University of Maryland at Baltimore Country, USA
Xiaohua Tony Hu , Drexel University, USA
pp. 1-2

Computational psychophysiology based research methodology for mental health (PDF)

Bin Hu , School of Information Science and Engineering, Lanzhou University, China
pp. 1

Whole genome sequencing of disease animal models (PDF)

Yi-Xue Li , Big Bio-Medical Data Center in CAS-MPG Partner Institute of computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
pp. 2

Information and decision-making in dynamic cell signaling (PDF)

David Rand , Warwick's Mathematics Institute, United Kingdom
pp. 3

Trajectory analysis — Linking genomic and proteomic data with disease progression (PDF)

Aidong Zhang , State University of New York, (SUNY) at Buffalo, United States of America
pp. 4

Deep-Learning: Investigating feed-forward deep Neural Networks for modeling high throughput chemical bioactivity data (PDF)

Jun Huan , Department of Electrical Engineering and Computer Science at the University of Kansas, United States of America
pp. 5

Networks and models for the integrated analysis of multi omics data (PDF)

Sun Kim , Bioinformatics Institute of Seoul National University, Korea
pp. 6

High performance computational biology and drug design on TianHe Supercomputers (PDF)

Shaoliang Peng , National University of Defense Technology, (NUDT, Changsha, China)
pp. 7

Multi-omic approaches for liver cancer biomarker discovery (PDF)

Habtom W. Resson , Georgetown University Medical Center (GUMC), United States of America
pp. 8

Semi-hypothesis guided exploratory analysis for biomedical applications (PDF)

Chi-Ren Shyu , University of Missouri Informatics Institute, United States of America
pp. 9

Computational tools for studying gene regulation in the 3-dimensional genome (PDF)

Kai Tan , Departments of Pediatrics, Genetics, Cell and Developmental Biology at the University of Pennsylvania and Children's Hospital of Philadelphia, United States of America
pp. 10

A map of binding cavity conformations reveals differences in binding specificity (Abstract)

Ziyi Guo , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
Brian Y. Chen , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
pp. 13-19

InfDisSim: A novel method for measuring disease similarity based on information flow (Abstract)

Yang Hu , School of Life Science and Technology, Harbin Institute of Technology, 150001, China
Meng Zhou , College of Bioinformatics Science and Technology, Harbin Medical University, 150001, China
Hongbo Shi , College of Bioinformatics Science and Technology, Harbin Medical University, 150001, China
Hong Ju , Department of information engineering, Heilongjiang biological science and technology, Career Academy, Harbin 150001, China
Qinghua Jiang , School of Life Science and Technology, Harbin Institute of Technology, 150001, China
Liang Cheng , College of Bioinformatics Science and Technology, Harbin Medical University, 150001, China
pp. 20-26

Predicting microRNA-environmental factor interactions based on bi-random walk and multi-label learning (Abstract)

Wei Lan , School of Information Science and Engineering, Central South University, Changsha, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, China
Min Li , School of Information Science and Engineering, Central South University, Changsha, China
Chengqian Lu , School of Information Science and Engineering, Central South University, Changsha, China
Fang-Xiang Wu , Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, Canada
Yi Pan , Department of Computer Science, Georgia State University, Atlanta, USA
pp. 27-32

CAMIL: Clustering and Assembly with Multiple Instance Learning for phenotype prediction (Abstract)

Nathan LaPierre , Department of Computer Science, George Mason University, Fairfax, Virginia 22030, United States of America
Mohammad Arifur Rahman , Department of Computer Science, George Mason University, Fairfax, Virginia 22030, United States of America
Huzefa Rangwala , Department of Computer Science, George Mason University, Fairfax, Virginia 22030, United States of America
pp. 33-40

Deep convolutional neural networks for detecting secondary structures in protein density maps from cryo-electron microscopy (Abstract)

Rongjian Li , Department of Computer Science, Old Dominion University, Norfolk, Virginia 23529, United States of America
Dong Si , Division of Computing and Software Systems, University of Washington Bothell, 98011, United States of America
Tao Zeng , School of Electrical Engineering and Computer Science, Washington State University, Pullman, 99164, United States of America
Shuiwang Ji , School of Electrical Engineering and Computer Science, Washington State University, Pullman, 99164, United States of America
Jing He , Department of Computer Science, Old Dominion University, Norfolk, Virginia 23529, United States of America
pp. 41-46

PredRBR: Accurate Prediction of RNA-Binding Residues in proteins using Gradient Tree Boosting (Abstract)

Diwei Liu , School of Software, Central South University, Changsha 410075, China
Yongjun Tang , Department of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha 410008, China
Chao Fan , School of Software, Central South University, Changsha 410075, China
Zhigang Chen , School of Software, Central South University, Changsha 410075, China
Lei Deng , School of Software, Central South University, Changsha 410075, China
pp. 47-52

HPTree: Reconstructing phylogenetic trees for ultra-large unaligned DNA sequences via NJ model and Hadoop (Abstract)

Quan Zou , School of Computer Science and Technology, Tianjin University, China
Shixiang Wan , School of Computer Science and Technology, Tianjin University, China
Xiangxiang Zeng , School of Information Science and Technology, Xiamen University, China
pp. 53-58

Accurate annotation of metagenomic data without species-level references (Abstract)

Haobin Yao , Department of Computer Science, The University of Hong Kong, China
T.W. Lam , Department of Computer Science, The University of Hong Kong, China
H.F. Ting , Department of Computer Science, The University of Hong Kong, China
S.M. Yiu , Department of Computer Science, The University of Hong Kong, China
Yadong Wang , School of Computer Science and Technology, Harbin Institute of Technology, China
Bo Liu , School of Computer Science and Technology, Harbin Institute of Technology, China
pp. 59-64

A de novo genome assembler based on MapReduce and bi-directed de Bruijn graph (Abstract)

Yuehua Zhang , School of Computing, Clemson University, SC 29634, USA
Pengfei Xuan , School of Computing, Clemson University, SC 29634, USA
Yunsheng Wang , School of Computing, Clemson University, SC 29634, USA
Pradip K. Srimani , School of Computing, Clemson University, SC 29634, USA
Feng Luo , School of Computing, Clemson University, SC 29634, USA
pp. 65-71

Concod: Accurate consensus-based approach of calling deletions from high-throughput sequencing data (Abstract)

Xiaodong Zhang , College of Information Science and Technology, Beijing University of Chemical Technology, China
Chong Chu , Department of Computer Science and Engineering, University of Connecticut, US of America
Yao Zhang , College of Information Science and Technology, Beijing University of Chemical Technology, China
Yufeng Wu , Department of Computer Science and Engineering, University of Connecticut, US of America
Jingyang Gao , College of Information Science and Technology, Beijing University of Chemical Technology, China
pp. 72-77

CNNsite: Prediction of DNA-binding residues in proteins using Convolutional Neural Network with sequence features (Abstract)

Jiyun Zhou , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, China
Qin Lu , Department of Computing, Hong Kong Polytechnic University, Hung Hom, Hong Kong
Ruifeng Xu , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, China
Lin Gui , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, China
Hongpeng Wang , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, China
pp. 78-85

Learning regulatory motifs by direct optimization of Fisher Exact Test Score (Abstract)

Lin Zhu , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
Ning Li , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
Wenzheng Bao , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
De-Shuang Huang , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
pp. 86-91

Compressing genome resequencing data via the Maximal Longest Factor (Abstract)

Richard Beal , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, United States of America
Aliya Farheen , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, United States of America
Don Adjeroh , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, United States of America
pp. 92-97

COSPEDTree-II: Improved couplet based phylogenetic supertree (Abstract)

Sourya Bhattacharyya , Department of Computer Science and Engineering, Indian Institute of Technology Kharagpur, West Bengal 721302, India
Jayanta Mukhopadhyay , Department of Computer Science and Engineering, Indian Institute of Technology Kharagpur, West Bengal 721302, India
pp. 98-101

COLT: COnstrained Lineage Tree Generation from sequence data (Abstract)

Keke Chen , Data Intensive Analysis and Computing Lab, Department of Computer Science and Engineering, Wright State University, Dayton, Ohio, USA
Venkata Sai Abhishek Gogu , Data Intensive Analysis and Computing Lab, Department of Computer Science and Engineering, Wright State University, Dayton, Ohio, USA
Di Wu , Systems Immunology Lab, Department of Biomedical Engineering, University of Texas at Austin, USA
Jiang Ning , Systems Immunology Lab, Department of Biomedical Engineering, University of Texas at Austin, USA
pp. 102-106

A novel algorithm for identifying essential proteins by integrating subcellular localization (Abstract)

Yetian Fan , School of Mathematical Sciences, Dalian University of Technology, 116023, China
Xiaohua Hu , College of Computing and Informatics, Drexel University, Philadelphia, PA, 19104 USA
Xiwei Tang , Department of Information Science and Engineering, Hunan First Normal University, Changsha 410205, China
Qing Ping , College of Computing and Informatics, Drexel University, Philadelphia, PA, 19104 USA
Wei Wu , School of Mathematical Sciences, Dalian University of Technology, 116023, China
pp. 107-110

Mining structural variants of Heduo12 using paired-end reads (Abstract)

Huiqiang Jia , School of Computer Science and Technology, Shandong University, Jinan, 250101, China
Haicho Wei , Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China
Daming Zhu , School of Computer Science and Technology, Shandong University, Jinan, 250101, China
Jingjing Ma , School of Computer Science and Technology, Shandong University, Jinan, 250101, China
Hai Yang , School of Computer Science and Technology, Shandong University, Jinan, 250101, China
Ruizhi Wang , School of Computer Science and Technology, Shandong University, Jinan, 250101, China
Xianzhong Feng , Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China
pp. 111-115

Improved protein residue-residue contacts prediction using learning-to-rank (Abstract)

Xiaoyang Jing , School of Computer Science, Fudan University, Shanghai 200433, China
Qiwen Dong , Institute for Data Science and Engineering, East China Normal University, Shanghai 200062, China
pp. 116-121

Hybrid error correction approach and de novo assembly for minion sequencing long reads (Abstract)

Mehdi Kchouk , Faculty of Sciences of Tunis (FST), Tunis El-Manar University, Tunisia
Mourad Elloumi , Laboratory of Technologies of Information and Communication and Electrical Engineering, ENSIT, University of Tunis, Tunisia
pp. 122-125

Symmetrical rigid body parameterization for biomolecular structures (Abstract)

Jin Seob Kim , Department of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States of America
Gregory S. Chirikjian , Department of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States of America
pp. 126-131

Semidefinite facial reduction and rigid cluster elastic network interpolation of protein structures (Abstract)

Xiao-Bo Li , Cheriton School of Computer Science, Faculty of Mathematics, University of Waterloo, ON, Canada
Forbes J Burkowski , Cheriton School of Computer Science, Faculty of Mathematics, University of Waterloo, ON, Canada
Henry Wolkowicz , Department of Combinatorics and Optimization, Faculty of Mathematics, University of Waterloo, ON, Canada
pp. 132-136

Analysis of transcriptome assembly pipelines for wheat (Abstract)

Natasha Pavlovikj , Department of Computer Science and Engineering, University of Nebraska-Lincoln, USA
Kevin Begcy , Department of Agronomy and Horticulture, University of Nebraska-Lincoln, USA
Sairam Behera , Department of Computer Science and Engineering, University of Nebraska-Lincoln, USA
Malachy Campbell , Department of Agronomy and Horticulture, University of Nebraska-Lincoln, USA
Harkamal Walia , Department of Agronomy and Horticulture, University of Nebraska-Lincoln, USA
Jitender S. Deogun , Department of Computer Science and Engineering, University of Nebraska-Lincoln, USA
pp. 137-140

ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data (Abstract)

Renjie Tan , School of Computer Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Jixuan Wang , School of Software, Harbin Institute of Technology, Heilongjiang, 150001, China
Xiaoliang Wu , School of Computer Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Guoqiang Wan , School of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Rongjie Wang , School of Computer Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Rui Ma , School of Computer Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Zhijie Han , School of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Wenyang Zhou , School of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Shuilin Jin , Department of Mathematics, Harbin Institute of Technology, Heilongjiang, 150001, China
Qinghua Jiang , School of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
Yadong Wang , School of Computer Science and Technology, Harbin Institute of Technology, Heilongjiang, 150001, China
pp. 141-144

Towards recognition of protein function based on its structure using deep convolutional networks (Abstract)

Amirhossein Tavanaei , The Center for Advanced Computer Studies, Bio-inspired AI Lab, University of Louisiana at Lafayette, 70504, USA
Anthony S. Maida , The Center for Advanced Computer Studies, Bio-inspired AI Lab, University of Louisiana at Lafayette, 70504, USA
Arun Kaniymattam , The Center for Advanced Computer Studies, Bioinformatics Research Lab, University of Louisiana at Lafayette, 70504, USA
Rasiah Loganantharaj , The Center for Advanced Computer Studies, Bioinformatics Research Lab, University of Louisiana at Lafayette, 70504, USA
pp. 145-149

Accelerating protein-protein complex validation by GPU based funnel generation (Abstract)

Michael Zabejansky , Blavatnik School of Computer Science, Tel Aviv University, Israel
Haim J. Wolfson , Blavatnik School of Computer Science, Tel Aviv University, Israel
pp. 150-155

Multi-norm constrained optimization methods for calling copy number variants in single cell sequencing data (Abstract)

Changsheng Zhang , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Hongmin Cai , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Jingying Huang , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Bo Xu , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
pp. 156-160

Estimating isoform abundance by Particle Swarm Optimization (Abstract)

Jin Zhao , Shandong University, School of Computer Science and Technology, Jinan, China
Haodi Feng , School of Computer Science and Technology, Shandong University, Shun Hua Road, 250101 Jinan, China
pp. 161-166

Characterizing the roles of long non-coding RNA in rat alcohol preference (Abstract)

Ao Zhou , Bioinformatics Program, Indiana University School of Informatics, Indianapolis, IN 46202, USA
Yadong Wang , Department of Bioengineering, University of Pittsburgh, PA 15213, USA
Yunlong Liu , Department of Medical and Molecular Biology, Indiana University School of Medicine, Indianapolis, 46202, USA
Weixing Feng , College of Automation, Harbin Engineering University, Heilongjiang, China
Howard J. Edenberg , Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, 46202, USA
pp. 167-173

Eliminating heterozygosity from reads through coverage normalization (Abstract)

Zicheng Zhao , Department of Computer Science, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong SAR
Yen Kaow Ng , Department of Computer Science, Faculty of Information and Communication Technology, Universiti Tunku Abdul Rahman, Kampar, Malaysia
Xiaodong Fang , Department of Computer Science, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong SAR
Shuaicheng Li , Department of Computer Science, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong SAR
pp. 174-177

DeeperBind: Enhancing prediction of sequence specificities of DNA binding proteins (Abstract)

Hamid Reza Hassanzadeh , Department of Computational Science and Engineering, Georgia Institute of Technology, Atlanta, 30332, United States of America
May D. Wang , Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, 30332, United States of America
pp. 178-183

A multi-modal graph-based semi-supervised pipeline for predicting cancer survival (Abstract)

Hamid Reza Hassanzadeh , Department of Computational Science and Engineering, Georgia Institute of Technology, North Avenue, Atlanta, 30332, United States of America
John H. Phan , Department of Biomedical Engineering, Georgia Institute of Technology, North Avenue, Atlanta, 30332, United States of America
May D. Wang , Department of Biomedical Engineering, Georgia Institute of Technology, North Avenue, Atlanta, 30332, United States of America
pp. 184-189

A computationally inferred regulatory heart aging model including post-transcriptional regulations (Abstract)

G. Politano , Control and Computer Engineering Department, Politecnico di Torino, Italy
F. Logrand , Department of Molecular Biotechnology and Health Sciences, University of Torino, Italy
M. Brancaccio , Department of Molecular Biotechnology and Health Sciences, University of Torino, Italy
S. Di Carlo , Control and Computer Engineering Department, Politecnico di Torino, Italy
pp. 190-197

Analysis of rumen microbial community in cattle through the integration of metagenomic and network-based approaches (Abstract)

Haiying Wang , School of Computing and Mathematics, Computer Science Research Institute, Ulster University, United Kingdom
Huiru Zheng , School of Computing and Mathematics, Computer Science Research Institute, Ulster University, United Kingdom
Fiona Browne , School of Computing and Mathematics, Computer Science Research Institute, Ulster University, United Kingdom
Rainer Roehe , Future Farming Systems, Scotland's Rural College, Edinburgh, United Kingdom
Richard J. Dewhurst , Future Farming Systems, Scotland's Rural College, Edinburgh, United Kingdom
Felix Engel , Research Institute for Telecommunication and Cooperation, Germany
Matthias Hemmje , Research Institute for Telecommunication and Cooperation, Germany
Paul Walsh , NSilico Life Science Ltd., Cork, Ireland
pp. 198-203

Metabolomic data deconvolution using probabilistic purification models (Abstract)

Minkun Wang , Department of Electrical and Computer Engineering Virginia Tech, Arlington, United States of America
Cristina Di Poto , Department of Oncology, Georgetown University, Washington D.C., USA
Alessia Ferrarini , Department of Oncology, Georgetown University, Washington D.C., USA
Guoqiang Yu , Department of Electrical and Computer Engineering Virginia Tech, Arlington, United States of America
Habtom W. Ressom , Department of Oncology, Georgetown University, Washington D.C., USA
pp. 204-209

Optimal control for context-sensitive probabilistic Boolean networks with perturbation using probabilisitic model checking (Abstract)

Ou Wei , Department of Computer Science, Nanjing University of Aeronautics and Astronautics, China
Zonghao Guo , Department of Computer Science, Nanjing University of Aeronautics and Astronautics, China
Yun Niu , Department of Computer Science, Nanjing University of Aeronautics and Astronautics, China
Wenyuan Liao , Department of Mathematics and Statistics, University of Calgary, Canada
pp. 210-216

Inference of genetic regulatory network for stem cell using single cells expression data (Abstract)

Jiangyong Wei , School of Statistics and Mathematics, Zhongnan University of Economics and Law, Wuhan, Hubei 430073, China
Xiaohua Hu , School of Computer, Central China Normal University, Wuhan, Hubei 430079, China
Xiufen Zou , School of Mathematics and Statistics, Wuhan University, Hubei 430072, China
Tianhai Tian , School of Mathematical Sciences, Monash University, Melbourne VIC 3800, Australia
pp. 217-222

Semi-supervised graph cut algorithm for drug repositioning by integrating drug, disease and genomic associations (Abstract)

Guangsheng Wu , State Key Laboratory of Software Engineering, School of Computer, Wuhan University, China 430072
Juan Liu , State Key Laboratory of Software Engineering, School of Computer, Wuhan University, China 430072
Caihua Wang , State Key Laboratory of Software Engineering, School of Computer, Wuhan University, China 430072
pp. 223-228

The MSS of complex networks with centrality based preference and its application to biomolecular networks (Abstract)

Lin Wu , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9, Canada
Lingkai Tang , Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9, Canada
Min Li , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
Fang-Xiang Wu , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9, Canada
pp. 229-234

Reconstructing gene regulatory network based on candidate auto selection method (Abstract)

Linlin Xing , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Maozu Guo , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Xiaoyan Liu , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Chunyu Wang , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Lei Wang , Institute of Health Service and Medical Information, Academy of Military Medical Sciences, Beijing, China 100850
Yin Zhang , Institute of Health Service and Medical Information, Academy of Military Medical Sciences, Beijing, China 100850
pp. 235-241

Feature selection based on functional group structure for microRNA expression data analysis (Abstract)

Yang Yang , Department of Computer Science and Engineering, Shanghai Jiao Tong University, China
Tianyu Cao , Department of Computer Science and Engineering, Shanghai Jiao Tong University, China
Wei Kong , Department of Computer Science and Engineering, Shanghai Maritime University, China
pp. 242-247

Just-in-time expression of influential genes in the cellular networks of the malaria parasite Plasmodium falciparum during the red blood cycle (Abstract)

Xinran Yu , Department of Computer Science, University of Texas at San Antonio, 78249, USA
Hao Zhang , Department of Biology, University of Texas at San Antonio, 78249, USA
Timothy G. Lilburn , Novozymes NA Inc., Durham, NC 27709, USA
Hong Cai , Department of Biology, University of Texas at San Antonio, 78249, USA
Jianying Gu , Department of Biology, College of Staten Island, City University of New York, 10314, USA
Turgay Korkmaz , Department of Computer Science, University of Texas at San Antonio, 78249, USA
Yufeng Wang , Department of Biology, University of Texas at San Antonio, 78249, USA
pp. 248-253

The prediction of human splicing branchpoints by multi-label learning (Abstract)

Wen Zhang , State Key Lab of Software Engineering, Wuhan University, 430072, China
Xiaopeng Zhu , School of Computer Science, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213, USA
Yu Fu , Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, 368 Plantation Street, Worcester, 01605, USA
Junko Tsuji , Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, 368 Plantation Street, Worcester, 01605, USA
Zhiping Weng , Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, 368 Plantation Street, Worcester, 01605, USA
pp. 254-259

Deep pathway analysis incorporating mutation information and gene expression data (Abstract)

Yue Zhao , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, United States of America
Tham H. Hoang , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, United States of America
Pujan Joshi , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, United States of America
Seung-Hyun Hong , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, United States of America
Dong-Guk Shin , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, United States of America
pp. 260-265

Top-k utility-based gene regulation sequential pattern discovery (Abstract)

Morteza Zihayat , Department of Electrical Engineering and Computer Science, York University, Toronto, Ontario, Canada
Heidar Davoudi , Department of Electrical Engineering and Computer Science, York University, Toronto, Ontario, Canada
Aijun An , Department of Electrical Engineering and Computer Science, York University, Toronto, Ontario, Canada
pp. 266-273

ILSES: Identification lysine succinylation-sites with ensemble classification (Abstract)

Wenzheng Bao , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
Lin Zhu , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
De-Shuang Huang , Institute of Machine Learning and Systems Biology, College of Electronics and Information Engineering, Tongji University, No. 4800 Caoan Road, Shanghai 201804, China
pp. 274-277

A new system for human microRNA functional evaluation and network (Abstract)

Jiachun Han , Department of Computer Science and Engineering, University of Nebraska - Lincoln, USA, 68588
Jiang Shu , Department of Computer Science and Engineering, University of Nebraska - Lincoln, USA, 68588
Juan Cui , Department of Computer Science and Engineering, University of Nebraska - Lincoln, USA, 68588
pp. 278-283

Inference and differential analysis of Extended Core Networks: A way to study anti-sense regulation (Abstract)

Marc Legeay , LERIA, Université d'Angers 2 boulevard Lavoisier 49045 ANGERS Cedex 01, FRANCE
Beatrice Duval , LERIA, Université d'Angers 2 boulevard Lavoisier 49045 ANGERS Cedex 01, FRANCE
Jean-Pierre Renou , IRHS, INRA, AGROCAMPUS-Ouest, Université d'Angers, SFR 4207 QUASAV, 42 rue Georges Morel 49071 Beaucouzé cedex, FRANCE
pp. 284-287

A framework for robust differential network modular structure discovery from RNA-seq data (Abstract)

Tianle Ma , Department of Computer Science and Engineering, University at Buffalo (SUNY), New York 14260-2500, United States of America
Aidong Zhang , Department of Computer Science and Engineering, University at Buffalo (SUNY), New York 14260-2500, United States of America
pp. 288-293

Towards constructing “Super Gene Sets” regulatory networks (Abstract)

Jake Y. Chen , Informatics of Medicine School, The university of Alabama at Birmingham, 35233, US
Zongliang Yue , Informatics of Medicine School, The university of Alabama at Birmingham, 35233, US
Michael T. Neylon , School of Informatics and Computing, Indiana University, Indianapolis, 46202, US
Thanh Nguyen , School of Informatics and Computing, Indiana University, Indianapolis, 46202, US
Nafisa Bulsara , School of Informatics and Computing, Indiana University, Indianapolis, 46202, US
Itika Arora , School of Informatics and Computing, Indiana University, Indianapolis, 46202, US
Timothy Ratliff , Purdue University Center for Cancer Research, West Lafayette, IN 47906, US
pp. 294-298

Predicting microRNA-disease associations by walking on four biological networks (Abstract)

Wei Peng , Computer Center, Kunming University of Science and Technology, 650050, China
Wei Lan , School of Information Science and Engineering, Central South University, Changsha, 410083, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, 410083, China
Yi Pan , Department of Computer Science, Georgia State University, Atlanta, 30302-4110, USA
pp. 299-302

Achieving high k-coverage and k-consistency in global alignment of multiple PPI networks (Abstract)

Bo Song , College of Computing and Informatics, Drexel University, Philadelphia, PA, USA
Jianliang Gao , School of Information Sciences and Engineering, Central South University, Changsha, China
Weimao Ke , College of Computing and Informatics, Drexel University, Philadelphia, PA, USA
Xiaohua Hu , College of Computing and Informatics, Drexel University, Philadelphia, PA, USA
pp. 303-307

A algorithm for identifying disease genes by incorporating the subcellular localization information into the protein-protein interaction networks (Abstract)

Xiwei Tang , School of Information Science and Engineering, Hunan First Normal University, Changsha, 410205, China
Xiaohua Hu , College of Computing and Informatics, Drexel University, Philadelphia, PA 19104, USA
Xuejun Yang , College of Computer, National University of Defense Technology, Changsha, 410073, China
Yuan Sun , School of Information Science and Engineering, Hunan First Normal University, Changsha, 410205, China
pp. 308-311

Network-based analysis of reverse phase protein array data (Abstract)

Rency S Varghese , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
Yiming Zuo , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
Yi Zhao , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
Yong-Wei Zhang , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
Sandra A Jablonski , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
Mariaelena Pierobon , Center for Applied Proteomics and Molecular Medicine, George Mason University, Manassas, VA, USA
Emanuel F Petricoin , Center for Applied Proteomics and Molecular Medicine, George Mason University, Manassas, VA, USA
Habtom W Ressom , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
Louis M Weiner , Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
pp. 312-317

Bacterial biological mechanisms for functional module detection in PPI networks (Abstract)

Cuicui Yang , Beijing Municipal Key Laboratory of Multimedia and Intelligent Software Technology, College of Computer Science and Technology, Faculty of Information Technology, Beijing University of Technology, China
Junzhong Ji , Beijing Municipal Key Laboratory of Multimedia and Intelligent Software Technology, College of Computer Science and Technology, Faculty of Information Technology, Beijing University of Technology, China
Aidong Zhang , Department of Computer Science and Engineering, State University of New York at Buffalo, USA
pp. 318-323

DASE: Condition-specific differential alternative splicing variants estimation method without reference genome sequence, and its application to non-model organisms (Abstract)

Kouki Yonezawa , Department of Computer Bioscience, Nagahama Institute of Bioscience and Technology, 1266 Tamura, Shiga, 526-0829, Japan
Tsukasa Mori , Department of Marine Science and Resources, Nihon University College of Bioresource Science, 1866, Kameino, Fujisawa-shi, Kanagawa 252-8510, Japan
Shuichi Shigeno , Stazione Zoologica Anton Dohrn di Napoli, Villa Comunale, 80121, Italy
Atsushi Ogura , Department of Computer Bioscience, Nagahama Institute of Bioscience and Technology, 1266 Tamura, Shiga, 526-0829, Japan
pp. 324-329

DeepSplice: Deep classification of novel splice junctions revealed by RNA-seq (Abstract)

Yi Zhang , Department of Computer Science, University of Kentucky, Lexington, 40506, USA
Xinan Liu , Department of Computer Science, University of Kentucky, Lexington, 40506, USA
James N. MacLeod , Department of Veterinary Science, University of Kentucky, Lexington, 40506, USA
Jinze Liu , Department of Computer Science, University of Kentucky, Lexington, 40506, USA
pp. 330-333

Robust Inductive Matrix Completion strategy to explore associations between lincRNAs and human disease phenotypes (Abstract)

Ashis Kumer Biswas , Dept. of Computer Science and Engineering, University of Texas at Arlington, 76019, United States of America
Dong-Chul Kim , Dept. of Computer Science, University of Texas Rio Grande Valley, Edinburg, 78541, United States of America
Mingon Kang , Dept. of Computer Science, Kennesaw State University, Marietta, GA 30060, United States of America
Jean X. Gao , Dept. of Computer Science and Engineering, University of Texas at Arlington, 76019, United States of America
pp. 334-339

Joint distribution adaptation based TSK Fuzzy logic system for epileptic EEG signal identification (Abstract)

Hao Feng , Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, 200062, China
Yaxin Peng , Department of Mathematics, Shanghai University, 200444, China
Guixu Zhang , Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, 200062, China
Chaomin Shen , Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, 200062, China
pp. 340-345

A shape model for contour extraction of Drosophila embryos (Abstract)

Qi Li , Western Kentucky University, Department of Computer Science, Bowling Green, USA
Yongyi Gong , Guangdong University of Foreign Studies, Cisco School of Informatics, Guangzhou, China
pp. 346-351

Emotion recognition from multi-channel EEG data through Convolutional Recurrent Neural Network (Abstract)

Xiang Li , Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin University, China
Dawei Song , Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin University, China
Peng Zhang , Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin University, China
Guangliang Yu , Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin University, China
Yuexian Hou , Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin University, China
Bin Hu , School of Information Science and Engineering, Lanzhou University, China
pp. 352-359

An ant colony optimization algorithm for learning brain effective connectivity network from fMRI data (Abstract)

Jinduo Liu , Beijing Municipal Key Laboratory of Multimedia and Intelligent Software, the College of Computer Science and Technology, Beijing University of Technology, China
Junzhong Ji , Beijing Municipal Key Laboratory of Multimedia and Intelligent Software, the College of Computer Science and Technology, Beijing University of Technology, China
Aidong Zhang , Department of Computer Science and Engineering, University at Buffalo, The State University of New York, America
Peipeng Liang , Beijing Key Lab of MRI and Brain Informatics Department of Radiology, Xuanwu Hospital, Capital Medical University, China
pp. 360-367

Analyzing epileptic network dynamics via time-variant partial directed coherence (Abstract)

Bo-Wen Liu , School of Biomedical Engineering, Shanghai Jiao Tong University, China
Jun-Wei Mao , School of Biomedical Engineering, Shanghai Jiao Tong University, China
Ye-Jun Shi , Department of Neurology, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, China
Qin-Chi Lu , Department of Neurology, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, China
Pei-Ji Liang , School of Biomedical Engineering, Shanghai Jiao Tong University, China
Pu-Ming Zhang , School of Biomedical Engineering, Shanghai Jiao Tong University, China
pp. 368-374

Construction of retinal vascular trees via curvature orientation prior (Abstract)

Xingzheng Lyu , College of Computer Science and Technology, Zhejiang University, Hangzhou, 310027, China
Qifan Yang , College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, 310027, China
Shunren Xia , College of Computer Science and Technology, Zhejiang University, Hangzhou, 310027, China
Sanyuan Zhang , College of Computer Science and Technology, Zhejiang University, Hangzhou, 310027, China
pp. 375-382

A modified rough-fuzzy clustering algorithm with spatial information for HEp-2 cell image segmentation (Abstract)

Shaswati Roy , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
Pradipta Maji , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
pp. 383-388

Automatic schizophrenia discrimination on fNIRS by using PCA and SVM (Abstract)

Hong Song , School of Software, Beijing Institute of Technology, China
Iordachescu Ilie Mihaita Bogdan , School of Software, Beijing Institute of Technology, China
Shuliang Wang , School of Software, Beijing Institute of Technology, China
Wentian Dong , Peking University Sixth Hospital, Peking University Institute of Mental Health, Key Laboratory of Mental Health, Ministry of Health (Peking University), Beijing, China
Wenxiang Quan , Peking University Sixth Hospital, Peking University Institute of Mental Health, Key Laboratory of Mental Health, Ministry of Health (Peking University), Beijing, China
Weimin Dang , Peking University Sixth Hospital, Peking University Institute of Mental Health, Key Laboratory of Mental Health, Ministry of Health (Peking University), Beijing, China
Xin Yu , Peking University Sixth Hospital, Peking University Institute of Mental Health, Key Laboratory of Mental Health, Ministry of Health (Peking University), Beijing, China
pp. 389-394

Cardiac image registration by combining point set matching with surface structure features (Abstract)

Cong Tan , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
Zhengrui Zhang , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
Xuan Yang , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
Jianbing Yi , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
pp. 395-402

Fluorescence and bright-field 3D image fusion based on sinogram unification for optical projection tomography (Abstract)

Xiaoqin Tang , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
Merel van't Hoff , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
Jerry Hoogenboom , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
Yuanhao Guo , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
Fuyu Cai , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
Gerda Lamers , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
Fons Verbeek , Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333CA, Netherlands
pp. 403-410

A conditional probabilistic model for joint analysis of symptoms, diseases, and herbs in traditional Chinese medicine patient records (Abstract)

Sheng Wang , Department of Computer Science, University of Illinois at Urbana-Champaign, USA
Edward W Huang , Department of Computer Science, University of Illinois at Urbana-Champaign, USA
Runshun Zhang , Guang'anmen Hospital, China Academy of Chinese Medical Sciences, Beijing, China
Xiaoping Zhang , National Data Center of Traditional Chinese Medicine, China Academy of Chinese Medical Sciences, Beijing, China
Baoyan Liu , National Data Center of Traditional Chinese Medicine, China Academy of Chinese Medical Sciences, Beijing, China
Xuezhong Zhou , School of Computer and Information Technology, Beijing Jiaotong University, China
ChengXiang Zhai , Department of Computer Science, University of Illinois at Urbana-Champaign, USA
pp. 411-418

A time-series similarity method for QRS morphology variation analysis (Abstract)

Liping Wang , School of Computer Science and Software Engineering, East China Normal University, Shanghai, China
Junjie Yao , School of Computer Science and Software Engineering, East China Normal University, Shanghai, China
Wenjie Zhang , School of Computer Science and Engineering, The University Of New South Wales, Sydney, Australia
pp. 419-426

Drug side effect prediction through linear neighborhoods and multiple data source integration (Abstract)

Wen Zhang , State Key Lab of Software Engineering, Wuhan University, 430072, China
Yanlin Chen , School of Mathematics and Statistics, Wuhan University, 430072, China
Shikui Tu , Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, 368 Plantation Street, Worcester, 01605, USA
Feng Liu , International School of software, Wuhan University, 430072, China
Qianlong Qu , School of Mathematics and Statistics, Wuhan University, 430072, China
pp. 427-434

FPGA implementation of the coupled filtering method (Abstract)

Chen Zhang , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Tianzhu Liang , National Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, Department of Biomedical Engineering, School of Medicine, Shenzhen University, China
Philip K.T. Mok , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Weichuan Yu , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
pp. 435-442

Coarse-to-Fine Stacked Fully Convolutional Nets for lymph node segmentation in ultrasound images (Abstract)

Yizhe Zhang , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
Michael T. C. Ying , Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hung Hom, Hong Kong
Lin Yang , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
Anil T. Ahuja , Department of Imaging and Interventional Radiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, NT, Hong Kong
Danny Z. Chen , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
pp. 443-448

Mathematical and computational analysis of CRISPR Cas9 sgRNA off-target homologies (Abstract)

Michael Zhou , Hall High School, West Hartford, CT 06117, USA
Daisy Li , Hall High School, West Hartford, CT 06117, USA
Xiaoli Huan , Troy University, United States of America
Josehph Manthey , Department of Mathematical Sciences, School of Health and Natural Sciences, University of Saint Joseph, West Hartford, CT 06117, USA
Ekaterina Lioutikova , Department of Mathematical Sciences, School of Health and Natural Sciences, University of Saint Joseph, West Hartford, CT 06117, USA
Hong Zhou , Department of Mathematical Sciences, School of Health and Natural Sciences, University of Saint Joseph, West Hartford, CT 06117, USA
pp. 449-454

Imaging-genetic data mapping for clinical outcome prediction via supervised conditional Gaussian graphical model (Abstract)

Xinliang Zhu , Department of Computer Science and Engineering, The University of Texas at Arlington, USA
Jiawen Yao , Department of Computer Science and Engineering, The University of Texas at Arlington, USA
Guanghua Xiao , Department of Clinical Science, The University of Texas Southwestern Medical Center, Dallas, USA
Yang Xie , Department of Clinical Science, The University of Texas Southwestern Medical Center, Dallas, USA
Jaime Rodriguez-Canales , Department of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, USA
Edwin R. Parra , Department of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, USA
Carmen Behrens , Department of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, USA
Ignacio I. Wistuba , Department of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, USA
Junzhou Huang , Department of Computer Science and Engineering, The University of Texas at Arlington, USA
pp. 455-459

Naïve Bayes ensemble: A new approach to classifying unlabeled multi-class asthma subjects (Abstract)

Seo-Jin Bang , Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA
Wei Wu , Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA
pp. 460-465

Identifying patterns of associated-conditions through topic models of Electronic Medical Records (Abstract)

Moumita Bhattacharya , Computational Biomedicine Lab, Computer and Information Sciences, University of Delaware, Newark, USA
Claudine Jurkovitz , Value Institute, Christiana Care Health System, Newark, DE, USA
Hagit Shatkay , Computational Biomedicine Lab, Computer and Information Sciences, University of Delaware, Newark, USA
pp. 466-469

A three-stage decision framework for multi-subject emotion recognition using physiological signals (Abstract)

Jing Chen , The School of Information Science and Engineering, Lanzhou University, China
Bin Hu , The School of Information Science and Engineering, Lanzhou University, China
Yue Wang , The School of Information Science and Engineering, Lanzhou University, China
Yongqiang Dai , The School of Information Science and Engineering, Lanzhou University, China
Yuan Yao , The School of Information Science and Engineering, Lanzhou University, China
Shengjie Zhao , The School of Information Science and Engineering, Lanzhou University, China
pp. 470-474

Corner detection and matching methods for brain medical image classification (Abstract)

Linlin Gao , College of Computer Science and Technology, Harbin Engineering University, China
Haiwei Pan , College of Computer Science and Technology, Harbin Engineering University, China
Jinming Han , Department of Neurology and Neurosience Center, 1st Hospital of Jilin University, Changchuan, China
Xiaoqin Xie , College of Computer Science and Technology, Harbin Engineering University, China
Zhiqiang Zhang , College of Computer Science and Technology, Harbin Engineering University, China
Xiao Zhai , College of Computer Science and Technology, Harbin Engineering University, China
pp. 475-478

Detection of fungal spores in 3D microscopy images of macroscopic areas of host tissue (Abstract)

Abhishek Kolagunda , Computer and Information Sciences, University of Delaware, Newark, 19716, United States of America
Randall Wisser , Plant and Soil Sciences, University of Delaware, Newark, 19716, United States of America
Timothy Chaya , Delaware Biotechnology Institute, University of Delaware, Newark, 19716, United States of America
Jeffrey Caplan , Delaware Biotechnology Institute, University of Delaware, Newark, 19716, United States of America
Chandra Kambhamettu , Computer and Information Sciences, University of Delaware, Newark, 19716, United States of America
pp. 479-483

Traditional Chinese Medicine formula evaluation using multi-instance multi-label framework (Abstract)

Yongchun Li , National Key Laboratory for Novel Software Technology, Nanjing University, 210046, China
Hong Li , National Key Laboratory for Novel Software Technology, Nanjing University, 210046, China
Qian Wang , National Key Laboratory for Novel Software Technology, Nanjing University, 210046, China
Chongjun Wang , National Key Laboratory for Novel Software Technology, Nanjing University, 210046, China
Xinsheng Fan , Jiangsu Key Laboratory for High Technology Research of TCM Formulae and Jiangsu Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, Nanjing University of Chinese Medicine, 210023, China
pp. 484-488

ELM-based classification of ADHD patients using a novel local feature extraction method (Abstract)

Yang Li , School of Computer Science and Engineering, Nanjing University of Science and Technology, China
Zhichao Lian , School of Computer Science and Engineering, Nanjing University of Science and Technology, China
Min Li , School of Computer Science and Engineering, Nanjing University of Science and Technology, China
Zhonggeng Liu , School of Computer Science and Engineering, Nanjing University of Science and Technology, China
Liang Xiao , School of Computer Science and Engineering, Nanjing University of Science and Technology, China
Zhihui Wei , School of Computer Science and Engineering, Nanjing University of Science and Technology, China
pp. 489-492

CNN-based image analysis for malaria diagnosis (Abstract)

Zhaohui Liang , School of Information Technology, York University, Toronto, ON, M3J1P3, Canada
Andrew Powell , Computer Science Department, Swarthmore College, PA 19081, USA
Ilker Ersoy , School of Medicine, University of Missouri, Columbia, 65212, USA
Mahdieh Poostchi , Computer Science Department, University of Missouri, Columbia, 65211, USA
Kamolrat Silamut , Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand
Kannappan Palaniappan , Computer Science Department, University of Missouri, Columbia, 65211, USA
Peng Guo , Electrical and Computer Engineering Department, Missouri S&T, Rolla, 65409, USA
Md Amir Hossain , Chittagong Medical College Hospital, Bangladesh
Antani Sameer , National Library of Medicine, National Institute of Health, Bethesda, MD 20894, USA
Richard James Maude , Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand
Jimmy Xiangji Huang , School of Information Technology, York University, Toronto, ON, M3J1P3, Canada
Stefan Jaeger , National Library of Medicine, National Institute of Health, Bethesda, MD 20894, USA
George Thoma , National Library of Medicine, National Institute of Health, Bethesda, MD 20894, USA
pp. 493-496

Prediction of neonatal amplitude-integrated EEG based on LSTM method (Abstract)

Lizhe Liu , School of Computer Science and Software Engineering, East China Normal University, Shanghai, China
Weiting Chen , School of Computer Science and Software Engineering, East China Normal University, Shanghai, China
Guitao Cao , School of Computer Science and Software Engineering, East China Normal University, Shanghai, China
pp. 497-500

SAFS: A deep feature selection approach for precision medicine (Abstract)

Milad Zafar Nezhad , Department of Industrial and Systems Engineering, Wayne State University, United States of America
Dongxiao Zhu , Department of Computer Science, Wayne State University, United States of America
Xiangrui Li , Department of Computer Science, Wayne State University, United States of America
Kai Yang , Department of Industrial and Systems Engineering, Wayne State University, United States of America
Phillip Levy , Department of Emergency Medicine and Cardiovascular Research Institute, Medical School, Wayne State University, United States of America
pp. 501-506

Learning schizophrenia imaging genetics data via Multiple Kernel Canonical Correlation Analysis (Abstract)

Owen Richfield , Department of Biomedical Engineering, Tulane University, New Orleans, LA 70118, USA
Md. Ashad Alam , Department of Biomedical Engineering, Tulane University, New Orleans, LA 70118, USA
Vince Calhoun , Department of Electrical and Computer Engineering, University of New Mexico and The Mind Research Network, Albuquerque, 87131, USA
Yu-Ping Wang , Department of Biomedical Engineering, Tulane University, New Orleans, LA 70118, USA
pp. 507-511

LCM-DS: A novel approach of predicting drug-drug interactions for new drugs via Dempster-Shafer theory of evidence (Abstract)

Jian-Yu Shi , School of Life Sciences, Northwestern Polytechnical University, Xi'an, China
Ke Gao , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Xue-Qun Shang , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Siu-Ming Yiu , Department of Computer Science, The University of Hong Kong, China
pp. 512-515

3D tracking swimming fish school using a master view tracking first strategy (Abstract)

Shuo Hong Wang , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
Xiang Liu , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
Jingwen Zhao , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
Ye Liu , College of Automation, Nanjing University of Posts and Telecommunications, Jiangsu, China
Yan Qiu Chen , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
pp. 516-519

Robust retinal vessel segmentation via clustering-based patch mapping functions (Abstract)

Haiying Xia , Guangxi Normal University, China
Shuaifei Deng , Guangxi Normal University, China
Minqi Li , University of Technology Sydney, Australia
Frank Jiang , University of Technology Sydney, Australia
pp. 520-523

A texture descriptor combining fractal and LBP complex networks (Abstract)

Jundong Yan , College of Computer Science and Technology, Dalian University of Technology, China
Yuanyuan Sun , College of Computer Science and Technology, Dalian University of Technology, China
Yawen Guan , College of Computer Science and Technology, Dalian University of Technology, China
Xiaopeng Hu , College of Computer Science and Technology, Dalian University of Technology, China
pp. 524

Answering diabetic patients' questions using expert-vetted online resources: A case study (Abstract)

Yuqun Zeng , The Second Clinical College, Guangzhou University of Chinese Medicine, Guangdong, China
Xusheng Liu , The Second Clinical College, Guangzhou University of Chinese Medicine, Guangdong, China
Liwei Wang , Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA
Hongfang Liu , Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA
Yanshan Wang , Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA
pp. 525-528

Building Bayesian networks from GWAS statistics based on Independence of Causal Influence (Abstract)

Lu Zhang , University of Arkansas, United States of America
Qiuping Pan , University of Arkansas, United States of America
Xintao Wu , University of Arkansas, United States of America
Xinghua Shi , University of North Carolina at Charlotte, United States of America
pp. 529-532

Nonlinear dynamic analysis of resting EEG alpha activity for heroin addicts (Abstract)

Qinglin Zhao , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Bin Hu , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Wenhua Lin , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Zhixue Li , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Hua Jiang , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Zhong Xue , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Hongqian Li , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Quanying Liu , Laboratory of Neural Control of Movement, ETH Zurich, 8057, Switzerland
pp. 533-537

Risk feature assessment of readmission for diabetes (Abstract)

Qian Zhu , Department of Information Systems, University of Maryland Baltimore County, USA
Anirudh Akkati , Department of Information Systems, University of Maryland Baltimore County, USA
Pornpoh Hongwattanakul , Department of Information Systems, University of Maryland Baltimore County, USA
pp. 538-543

Deep convolutional neural network for survival analysis with pathological images (Abstract)

Xinliang Zhu , Department of Computer Science and Engineering, The University of Texas at Arlington, USA
Jiawen Yao , Department of Computer Science and Engineering, The University of Texas at Arlington, USA
Junzhou Huang , Department of Computer Science and Engineering, The University of Texas at Arlington, USA
pp. 544-547

BioNimbuZ: A federated cloud platform for bioinformatics applications (Abstract)

Michel Rosa , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Breno Moura , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Guilherme Vergara , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Lucas Santos , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Edward Ribeiro , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Maristela Holanda , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Maria Emilia Walter , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
Aleteia Araujo , Dept. of Computer Science, University of Brasília - UnB, District Federal, Brazil
pp. 548-555

Unsupervised single-cell analysis in triple-negative breast cancer: A case study (Abstract)

Arjun P. Athreya , University of Illinois at Urbana-Champaign, USA
Alan J. Gaglio , University of Illinois at Urbana-Champaign, USA
Zbigniew T. Kalbarczyk , University of Illinois at Urbana-Champaign, USA
Ravishankar K. Iyer , University of Illinois at Urbana-Champaign, USA
Junmei Cairns , Mayo Clinic, Rochester, MN, USA
Krishna R. Kalari , Mayo Clinic, Rochester, MN, USA
Richard M. Weinshilboum , Mayo Clinic, Rochester, MN, USA
Liewei Wang , Mayo Clinic, Rochester, MN, USA
pp. 556-563

Integration of multiple heterogeneous omics data (Abstract)

Chuanchao Zhang , State Key Laboratory of Software Engineering, School of Computer, Wuhan University, China
Juan Liu , State Key Laboratory of Software Engineering, School of Computer, Wuhan University, China
Qianqian Shi , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
Xiangtian Yu , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
Tao Zeng , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
Luonan Chen , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
pp. 564-569

Copula particle filter algorithm for inferring parameters of regulatory network models with noisy observation data (Abstract)

Zhimin Deng , School of Applied Mathematics, Guangdong University of Technology, Guangzhou 510520, China
Xingan Zhang , School of Mathematics and Statistics, Central China Normal University, Wuhan 430000, China
Tianhai Tian , School of Mathematical Sciences, Monash University, Melbourne Victoria 3800 Australia
pp. 570-575

HiGene: A high-performance platform for genomic data analysis (Abstract)

Liqun Deng , Shannon Cognitive Computing Laboratory, Huawei, Shenzhen, China
Guowei Huang , Shannon Cognitive Computing Laboratory, Huawei, Shenzhen, China
Yuzheng Zhuang , Shannon Cognitive Computing Laboratory, Huawei, Shenzhen, China
Jiansheng Wei , Shannon Cognitive Computing Laboratory, Huawei, Shenzhen, China
Youliang Yan , Shannon Cognitive Computing Laboratory, Huawei, Shenzhen, China
pp. 576-583

Unconstrained optimization in projection method for indefinite SVMs (Abstract)

Hao Jiang , Department of Mathematics, School of Information, Renmin University of China, No.59 Zhong Guan Cun Street, Hai Dian District, Beijing, China
Wai Ki Ching , Advanced Modeling and Applied Computing Laboratory, Department of Mathematics, University of Hong Kong, Pokfulam Road, Hong Kong
Yu Shan Qiu , College of Mathematics and Statistics, Shenzhen University, Guangdong, China
Xiao Qing Cheng , School of Mathematics and Statistics, Xi'An Jiaotong University, Xian, China
pp. 584-591

Computational identification of regions that influence activity of transposable elements in the human genome (Abstract)

Lingling Jin , Department of Computer Science, University of Saskatchewan, Canada
Ian McQuillan , Department of Computer Science, University of Saskatchewan, Canada
Longhai Li , Department of Mathematics and Statistics, University of Saskatchewan, Canada
pp. 592-599

A p-norm singular value decomposition method for robust tumor clustering (Abstract)

Xiang-Zhen Kong , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Chun-Hou Zheng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Mi-Xiao Hou , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Yao Lu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
pp. 600-605

Numerical assessment of airflow and inhaled particles attributes in obstructed pulmonary system (Abstract)

A. Lalas , Information Technologies Institute, Centre for Research and Technology - Hellas (CERTH), Thessaloniki, Greece
D. Kikidis , Information Technologies Institute, Centre for Research and Technology - Hellas (CERTH), Thessaloniki, Greece
K. Votis , Information Technologies Institute, Centre for Research and Technology - Hellas (CERTH), Thessaloniki, Greece
D. Tzovaras , Information Technologies Institute, Centre for Research and Technology - Hellas (CERTH), Thessaloniki, Greece
S. Verbanck , Respiratory Division, University Hospital UZ Brussel, Vrije Universiteit Brussel, Brussels, Belgium
S. Nousias , Department of Electrical and Computer Engineering, University of Patras, Patra, Greece
A. Lalos , Department of Electrical and Computer Engineering, University of Patras, Patra, Greece
K. Moustakas , Department of Electrical and Computer Engineering, University of Patras, Patra, Greece
O. Usmani , National Heart and Lung Institute (NHLI), Imperial College London and Royal Brompton Hospital, United Kingdom
pp. 606-612

Learning with Positive and Unknown Features (Abstract)

Chao Lan , Department of Electrical Engineering and Computer Science, University of Kansas, Lawrence, 66049, United States of America
Sai Nivedita Chandrasekaran , Department of Bioengineering, University of Kansas, Lawrence, 66049, United States of America
Jun Huan , Department of Electrical Engineering and Computer Science, University of Kansas, Lawrence, 66049, United States of America
pp. 613-618

The feature selection algorithm based on feature overlapping and group overlapping (Abstract)

Xiaohui Lin , School of Computer Science & Technology, Dalian University of Technology, 116024, China
Huanhuan Song , School of Computer Science & Technology, Dalian University of Technology, 116024, China
Meng Fan , School of Computer Science & Technology, Dalian University of Technology, 116024, China
Weijie Ren , School of Computer Science & Technology, Dalian University of Technology, 116024, China
Lishuang Li , School of Computer Science & Technology, Dalian University of Technology, 116024, China
Weihong Yao , School of Computer Science & Technology, Dalian University of Technology, 116024, China
pp. 619-624

Multi-view clustering microbiome data by joint symmetric nonnegative matrix factorization with Laplacian regularization (Abstract)

Yuanyuan Ma , School of Information Management, Central China Normal University, Wuhan, China
Xiaohua Hu , School of Computer, Central China Normal University, Wuhan, China
Tingting He , School of Computer, Central China Normal University, Wuhan, China
Xingpeng Jiang , School of Computer, Central China Normal University, Wuhan, China
pp. 625-630

Construction of the spatial and temporal active protein interaction network for identifying protein complexes (Abstract)

Xiangmao Meng , School of Information Science and Engineering, Central South University, Changsha, China
Min Li , School of Information Science and Engineering, Central South University, Changsha, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, China
Fang-Xiang Wu , School of Information Science and Engineering, Central South University, Changsha, China
Yi Pan , School of Information Science and Engineering, Central South University, Changsha, China
pp. 631-636

DeepEnhancer: Predicting enhancers by convolutional neural networks (Abstract)

Xu Min , MOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic & Systems Biology, TNLIST, Department of Automation, Tsinghua University, Beijing 100084, China
Ning Chen , MOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic & Systems Biology, TNLIST, Department of Automation, Tsinghua University, Beijing 100084, China
Ting Chen , MOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic & Systems Biology, TNLIST, Department of Automation, Tsinghua University, Beijing 100084, China
Rui Jiang , MOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic & Systems Biology, TNLIST, Department of Automation, Tsinghua University, Beijing 100084, China
pp. 637-644

Identifying protein complexes via multi-network clustering (Abstract)

Le Ou-Yang , College of Information Engineering, Shenzhen University, 518060, China
Hong Yan , Department of Electronic and Engineering, City University of Hong Kong, Hong Kong
Xiao-Fei Zhang , School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Wuhan 430079, China
pp. 645-650

mAMBER: A CPU/MIC collaborated parallel framework for AMBER on Tianhe-2 supercomputer (Abstract)

Shaoliang Peng , School of Computer Science, National University of Defense Technology, Changsha, China
Xiaoyu Zhang , School of Computer Science, National University of Defense Technology, Changsha, China
Yutong Lu , School of Computer Science, National University of Defense Technology, Changsha, China
Xiangke Liao , School of Computer Science, National University of Defense Technology, Changsha, China
Kai Lu , School of Computer Science, National University of Defense Technology, Changsha, China
Canqun Yang , School of Computer Science, National University of Defense Technology, Changsha, China
Jie Liu , School of Computer Science, National University of Defense Technology, Changsha, China
Weiliang Zhu , Drug Discovery and Design Center, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, China
Dongqing Wei , College of Life Sciences and Biotechnology and State Key Laboratory of Microbial Metabolism, Shanghai Jiao Tong University, China
pp. 651-657

Finding more effective microsatellite markers for forensics (Abstract)

Bowen Tan , Department of Computer Science, City University of Hong Kong, Hong Hong
Zhe Zhang , Beijing Genomics Institute, Shenzhen, 518083, China
Zicheng Zhao , Department of Computer Science, City University of Hong Kong, Hong Hong
Shengbin Li , Xi'an Jiaotong University, China
Shuai Cheng Li , Department of Computer Science, City University of Hong Kong, Hong Hong
pp. 658-663

L21-iPaD: An efficient method for drug-pathway association pairs inference (Abstract)

Dong-Qin Wang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Chun-Hou Zheng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Ying-Lian Gao , Library of Qufu Normal University, Qufu Normal University, Rizhao, 276826 China
Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Sha-Sha Wu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Jun-Liang Shang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
pp. 664-669

qPMS10: A randomized algorithm for efficiently solving quorum Planted Motif Search problem (Abstract)

Peng Xiao , Computer Science and Engineering, University of Connecticut, 371 Fairfield Road, Storrs, 06269, USA
Soumitra Pal , Computer Science and Engineering, University of Connecticut, 371 Fairfield Road, Storrs, 06269, USA
Sanguthevar Rajasekaran , Computer Science and Engineering, University of Connecticut, 371 Fairfield Road, Storrs, 06269, USA
pp. 670-675

A predictive model of gene expression using a deep learning framework (Abstract)

Rui Xie , Department of Computer Science, University of Missouri at Columbia, 65201, USA
Andrew Quitadamo , Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, 28223, USA
Jianlin Cheng , Department of Computer Science, University of Missouri at Columbia, 65201, USA
Xinghua Shi , Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, 28223, USA
pp. 676-681

Latent factor model with heterogeneous similarity regularization for predicting gene-disease associations (Abstract)

Xiangxiang Zeng , Department of Computer Science, School of information science and technology, Xiamen University, China
Ningxiang Ding , Department of Computer Science, School of information science and technology, Xiamen University, China
Quan Zou , School of Computer Science and Technology, Tianjin University, China
pp. 682-687

Innovative microRNA-lncRNA-mRNA co-expression analysis to understand the pathogenesis and progression of diabetic kidney disease (Abstract)

Lihua Zhang , Department of Geriatric Endocrinology, First Affiliated Hospital of Kunming Medical University, Yunnan 650031, China
Rong Li , Department of Nephrology, First People's Hospital of Yunnan Province, Kunming, 650032, China
Qiuping Yang , Department of Geriatric Endocrinology, First Affiliated Hospital of Kunming Medical University, Yunnan 650031, China
Yanan Wu , Department of Geriatric Endocrinology, First Affiliated Hospital of Kunming Medical University, Yunnan 650031, China
Jingshan Huang , Computer Science Department, School of Computing, University of South Alabama, Mobile, 36688, U.S.A.
Bin Wu , Department of Endocrinology and Metabolism, First Affiliated Hospital of Kunming Medical University, Yunnan 650031, China
pp. 688-693

Improving clinical case search using semantic based query reformulations (Abstract)

Mohammad Alsulmi , Department of Computer & Information Sciences, University of Delaware, Newark, USA
Ben Carterette , Department of Computer & Information Sciences, University of Delaware, Newark, USA
pp. 694-698

Weighted multiview learning for predicting drug-disease associations (Abstract)

Sai Nivedita Chandrasekaran , Bioengineering Program, University of Kansas, Lawrence, 66045, United States of America
Jun Huan , Department of Electrical and Computer engineering, University of Kansas, Lawrence, 66045, United States of America
pp. 699-702

Evaluation of CD-HIT for constructing non-redundant databases (Abstract)

Qingyu Chen , Dept. of Computing & Information Systems, University of Melbourne, Parkville, Victoria 3010, Australia
Yu Wan , Centre for Systems Genomics, University of Melbourne, Parkville, Victoria 3010, Australia
Yang Lei , Dept. of Computing & Information Systems, University of Melbourne, Parkville, Victoria 3010, Australia
Justin Zobel , Dept. of Computing & Information Systems, University of Melbourne, Parkville, Victoria 3010, Australia
Karin Verspoor , Dept. of Computing & Information Systems, University of Melbourne, Parkville, Victoria 3010, Australia
pp. 703-706

Sparse Canonical Correlation Analysis via truncated ℓ1-norm with application to brain imaging genetics (Abstract)

Lei Du , School of Automation, Northwestern Polytechnical University, Xi'an, China 710072
Tuo Zhang , School of Automation, Northwestern Polytechnical University, Xi'an, China 710072
Kefei Liu , Indiana University School of Medicine, Indianapolis, USA 46202
Xiaohui Yao , Indiana University School of Medicine, Indianapolis, USA 46202
Jingwen Yan , Indiana University School of Medicine, Indianapolis, USA 46202
Shannon L. Risacher , Indiana University School of Medicine, Indianapolis, USA 46202
Lei Guo , School of Automation, Northwestern Polytechnical University, Xi'an, China 710072
Andrew J. Saykin , Indiana University School of Medicine, Indianapolis, USA 46202
Li Shen , Indiana University School of Medicine, Indianapolis, USA 46202
pp. 707-711

Topic modeling of biomedical text (Abstract)

Sarah ElShal , Department of Electrical Engineering (ESAT), KU Leuven, Belgium
Mithila Mathad , Department of Electrical Engineering (ESAT), KU Leuven, Belgium
Jaak Simm , Department of Electrical Engineering (ESAT), KU Leuven, Belgium
Jesse Davis , Department of Electrical Engineering (ESAT), KU Leuven, Belgium
Yves Moreau , Department of Electrical Engineering (ESAT), KU Leuven, Belgium
pp. 712-716

Analysis of temporal constraints in qualitative eligibility criteria of cancer clinical studies (Abstract)

Zhe He , School of Information, Department of Computer Science, Florida State University, Tallahassee, USA
Zhiwei Chen , School of Information, Department of Computer Science, Florida State University, Tallahassee, USA
Jiang Bian , Department of Health Outcomes and Policy, University of Florida, Gainesville, USA
pp. 717-722

A novel phylogeny-based pattern selection algorithm and its application to microbiomic data (Abstract)

Nancy A. Huang , Dept. of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan
Yen-Jen Oyang , Graduate Inst. of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
pp. 723-726

Variable selection and prediction of clinical outcome with multiply-imputed data via Bayesian model averaging (Abstract)

Guozhi Jiang , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Claudia H. T. Tam , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Andrea O. Y. Luk , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Alice P. S. Kong , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Wing Yee So , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Juliana C. N. Chan , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Ronald C. W. Ma , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Xiaodan Fan , Department of Statistics, The Chinese University of Hong Kong, China
pp. 727-730

A distributed and privatized framework for drug-target interaction prediction (Abstract)

Chao Lan , Department of Electrical Engineering and Computer Science, University of Kansas, Lawrence, 66049, USA
Sai Nivedita Chandrasekaran , Department of Bioengineering, University of Kansas, Lawrence, 66049, USA
Jun Huan , Department of Electrical Engineering and Computer Science, University of Kansas, Lawrence, 66049, USA
pp. 731-734

Mining protein complexes based on topology potential from weighted dynamic PPI network (Abstract)

Xiujuan Lei , School of Computer Science, Shaanxi Normal University, Xi'an, China
Yuchen Zhang , School of Computer Science, Shaanxi Normal University, Xi'an, China
Fang-Xiang Wu , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, Canada
Aidong Zhang , Department of Computer Science and Engineering, State University of New York at Baffalo, USA
pp. 735-738

Biomedical event extraction via Long Short Term Memory networks along dynamic extended tree (Abstract)

Lishuang Li , School of Computer Science and Technology, Dalian University of Technology, China
Jieqiong Zheng , School of Computer Science and Technology, Dalian University of Technology, China
Jia Wan , School of Computer Science and Technology, Dalian University of Technology, China
Degen Huang , School of Computer Science and Technology, Dalian University of Technology, China
Xiaohui Lin , School of Computer Science and Technology, Dalian University of Technology, China
pp. 739-742

BAMOKNN: A novel computational method for predicting the apoptosis protein locations (Abstract)

Xiangtao Li , School of Computer Science and Information Technology, Northeast Normal University, Changchun, China, 130117
Shijing Ma , School of Computer Science and Information Technology, Northeast Normal University, Changchun, China, 130117
Yunhe Wang , School of Computer Science and Information Technology, Northeast Normal University, Changchun, China, 130117
pp. 743-746

Accelerating large-scale genomic analysis with Spark (Abstract)

Xueqi Li , State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, China
Guangming Tan , State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, China
Chunming Zhang , State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, China
Xu Li , State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, China
Zhonghai Zhang , State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, China
Ninghui Sun , State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, China
pp. 747-751

Visual orchestration and autonomous execution of distributed and heterogeneous computational biology pipelines (Abstract)

Xin Mou , Department of Computer Science, University of Idaho, USA
Hasan M. Jamil , Department of Computer Science, University of Idaho, USA
Robert Rinker , Department of Computer Science, University of Idaho, USA
pp. 752-757

Maximizing systolic array efficiency to accelerate the PairHMM Forward Algorithm (Abstract)

Johan Peltenburg , Computer Engineering Laboratory, TU Delft, Netherlands
Shanshan Ren , Computer Engineering Laboratory, TU Delft, Netherlands
Zaid Al-Ars , Computer Engineering Laboratory, TU Delft, Netherlands
pp. 758-762

Measuring phenotype semantic similarity using Human Phenotype Ontology (Abstract)

Jiajie Peng , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Hansheng Xue , School of Computer Science and Technology, Harbin Institute of Technology, Shenzhen, China
Yukai Shao , School of Computer Science and Technology, Harbin Institute of Technology, Shenzhen, China
Xuequn Shang , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Yadong Wang , School of Computer Science and Technology, Harbin Institute of Technology, China
Jin Chen , Institute of Biomedical Informatics, College of Medicine, University of Kentucky, Lexington, 40536, USA
pp. 763-766

Iterative segmented least square method for functional microRNA-mRNA module discovery in breast cancer (Abstract)

Sungmin Rhee , Computer Science and Engineering, Seoul National University, Republic of Korea
Sangsoo Lim , Interdisciplinary Program in Bioinformatics, Seoul National University, Republic of Korea
Sun Kim , Computer Science and Engineering, Interdisciplinary Program in Bioinformatics, Seoul National University, Republic of Korea
pp. 767-770

Predicting disease-microbe association by random walking on the heterogeneous network (Abstract)

Xianjun Shen , School of Computer, Central China Normal University, Wuhan, China
Yao Chen , School of Computer, Central China Normal University, Wuhan, China
Xingpeng Jiang , School of Computer, Central China Normal University, Wuhan, China
Xiaohua Hu , School of Computer, Central China Normal University, Wuhan, China
Tingting He , School of Computer, Central China Normal University, Wuhan, China
Jincai Yang , School of Computer, Central China Normal University, Wuhan, China
pp. 771-774

Biomedical event extraction based on distributed representation and deep learning (Abstract)

Anran Wang , School of Computer Science and Technology, Dalian University of Technology, China
Jian Wang , School of Computer Science and Technology, Dalian University of Technology, China
Hongfei Lin , School of Computer Science and Technology, Dalian University of Technology, China
Jianhai Zhang , School of Computer Science and Technology, Dalian University of Technology, China
Zhihao Yang , School of Computer Science and Technology, Dalian University of Technology, China
Kan Xu , School of Computer Science and Technology, Dalian University of Technology, China
pp. 775

DMcompress: Dynamic Markov models for bacterial genome compression (Abstract)

Rongjie Wang , School of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Mingxiang Teng , School of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Yang Bai , School of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Tianyi Zang , School of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Yadong Wang , School of Computer Science and Technology, Harbin Institute of Technology, 150001, China
pp. 776-779

Online Multi-Instance Multi-Label learning for protein function prediction (Abstract)

Feng Wu , The School of Software Engineering, South China University of Technology, Guangzhou, China
Qiong Liu , The School of Software Engineering, South China University of Technology, Guangzhou, China
Tianyong Hao , School of Informatics, Guangdong University of Foreign Studies, Guangzhou, China
Xiaojun Chen , The College of Computer Science and Software, Shenzhen University, China
Qingyao Wu , The School of Software Engineering, South China University of Technology, Guangzhou, China
pp. 780-785

A realistic and reliable 3D pronunciation visualization instruction system for computer-assisted language learning (Abstract)

Jun Yu , Department of Automation, University of Science and Technology of China, Hefei, China
Zengfu Wang , Department of Automation, University of Science and Technology of China, Hefei, China
pp. 786-789

VinaSC: Scalable Autodock Vina with fine-grained scheduling on heterogeneous platform (Abstract)

Lang Yu , Sino-German Joint Software Institute, Beihang University, Beijing, China
Zhongzhi Luan , Sino-German Joint Software Institute, Beihang University, Beijing, China
Xiangzheng Sun , Software & Service Group, Intel China Ltd., Beijing, China
Zhe Wang , Software & Service Group, Intel China Ltd., Beijing, China
Hailong Yang , Sino-German Joint Software Institute, Beihang University, Beijing, China
pp. 790-793

ML-CNN: A novel deep learning based disease named entity recognition architecture (Abstract)

Zhehuan Zhao , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Zhihao Yang , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Ling Luo , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Yin Zhang , Beijing Institute of Health Administration and Medical Information, China, 100850
Lei Wang , Beijing Institute of Health Administration and Medical Information, China, 100850
Hongfei Lin , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Jian Wang , College of Computer Science and Technology, Dalian University of Technology, China, 116023
pp. 794

Implementation of a city-wide Health Information Exchange solution in the largest metropolitan region in China (Abstract)

Guangjun Yu , Shanghai Children's Hospital, China
Wenbin Cui , Shanghai Children's Hospital, China
Li Zhou , Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA
David W Bates , Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA
Jianlei Gu , Center for Biomedical Informatics, Shanghai Children's Hospital, Shanghai Jiaotong University, China
Hui Lu , Center for Biomedical Informatics, Shanghai Children's Hospital, Shanghai Jiaotong University, China
pp. 795-798

Learning to diagnose cirrhosis via combined liver capsule and parenchyma ultrasound image features (Abstract)

Shuo Hong Wang , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
Xiang Liu , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
Jingwen Zhao , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
Jia Lin Song , Department of ultrasound, Changzheng Hospital Affiliated to Second Military Medical University, Shanghai, China
Jian Quan Zhang , Department of ultrasound, Changzheng Hospital Affiliated to Second Military Medical University, Shanghai, China
Yan Qiu Chen , School of Computer Science, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, China
pp. 799-804

Inferring Social Influence of anti-Tobacco mass media campaigns (Abstract)

Qianyi Zhan , National Laboratory for Novel Software Technology, Nanjing University, China
Jiawei Zhang , University of Illinois at Chicago, USA
Philip S. Yu , University of Illinois at Chicago, USA
Sherry Emery , NORC at the University of Chicago, IL, USA
Junyuan Xie , National Laboratory for Novel Software Technology, Nanjing University, China
pp. 805-812

Frequency Tree clustering for ICU mortality analytics using graph databases (Abstract)

Samir E. Abdelrahman , Department of Biomedical Informatics, University of Utah, USA
Bruce E. Bray , Department of Biomedical Informatics and Division of Cardiovascular Medicine, University of Utah, USA
pp. 813-817

An integrated Medical CPS for early detection of paroxysmal sympathetic hyperactivity (Abstract)

Zuxing Gu , School of Software, Tsinghua University, Beijing, China
Hong Song , School of Software, Beijing Institute of Technology, China
Yu Jiang , School of Software, Tsinghua University, Beijing, China
Jeonghone Choi , Department of Computer Science, University of Illinois at Urbana-Champaign, USA
Hongjiang He , Department of Neurosurgery, PLA Army General Hospital, Beijing, China
Lui Sha , Department of Computer Science, University of Illinois at Urbana-Champaign, USA
Ming Gu , School of Software, Tsinghua University, Beijing, China
pp. 818-822

An ensemble embedded feature selection method for multi-label clinical text classification (Abstract)

Yumeng Guo , Department of Control Science and Engineering, Tongji University, Shanghai, China
Fulai Chung , Department of Computing, Hong Kong Polytechnic University, Hong Kong
Guozheng Li , Department of Control Science and Engineering, Tongji University, Shanghai, China
pp. 823-826

MR brain tumor detection employing Laplacian Eigen maps and kernel support vector machine (Abstract)

Rahul Singh , ABV- IIITM, Gwalior, India
Prateek Agarwal , ABV-IIITM, Gwalior, India
Mahua Bhattacharya , ABV- IIITM, Gwalior, India
pp. 827-830

How to record the amount of exercise automatically? A general real-time recognition and counting approach for repetitive activities (Abstract)

Shugang Zhang , Department of Computer Science and Technology, Ocean University of China, Qingdao, China
Zhen Li , Department of Computer Science and Technology, Ocean University of China, Qingdao, China
Jie Nie , Department of Computer Science and Technology, Tsinghua University, Beijing, China
Lei Huang , Department of Computer Science and Technology, Ocean University of China, Qingdao, China
Shuang Wang , Department of Computer Science and Technology, Ocean University of China, Qingdao, China
Zhiqiang Wei , Department of Computer Science and Technology, Ocean University of China, Qingdao, China
pp. 831-834

SeqMaker: A next generation sequencing simulator with variations, sequencing errors and amplification bias integrated (Abstract)

Shifu Chen , Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, China
Yue Han , HaploX Biotechnology, Shenzhen, China.
Lanting Guo , HaploX Biotechnology, Shenzhen, China.
Jingjing Hu , HaploX Biotechnology, Shenzhen, China.
Jia Gu , University of Chinese Academy of Sciences, Beijing, China
pp. 835-840

Assisting humans to achieve optimal sleep by changing ambient temperature (Abstract)

Vivek Gupta , IIT Kanpur, India
Siddhant Mittal , IIT Bombay, India
Sandip Bhaumik , Samsung R&D, Bangalore, India
Raj Roy , Samsung R&D, Bangalore, India
pp. 841-845

IXAmed-IE: On-line medical entity identification and ADR event extraction in Spanish (Abstract)

A. Casillas , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
A. Diaz de Ilarraza , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
K. Fernandez , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
K. Gojenola , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
M. Oronoz , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
A. Perez , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
S. Santiso , IXA group (http://ixa.si.ehu.eus). Computer Engineering Faculty; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
pp. 846-849

Large scale extraction of perfect and imperfect DNA palindromes using in-memory computing (Abstract)

William Baskett , Division of Biological Sciences, University of Missouri, Columbia, 65211, USA
Matthew Spencer , Informatics Institute, University of Missouri, Columbia, 65211, USA
Chi-Ren Shyu , Informatics Institute, University of Missouri, Columbia, 65211, USA
pp. 850-857

Feature study of conversion blindness on functional network with aggregation of local key information (Abstract)

Keling Fei , School of Automation and Electrical Engineering, Lanzhou Jiaotong University, China
Wei Wang , School of Information Science and Engineering, Lanzhou University, China
Shusen Tang , School of Information Science and Engineering, Lanzhou University, China
Qiaoli Yang , School of Automation and Electrical Engineering, Lanzhou Jiaotong University, China
Xu Wang , School of Information Science and Engineering, Lanzhou University, China
Qi Xu , School of Information Science and Engineering, Lanzhou University, China
pp. 858-863

LCTD: A lossless compression tool of FASTQ file based on transformation of original file distribution (Abstract)

Jiabing Fu , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
Yacong Ma , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
Bixin Ke , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
Shoubin Dong , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
pp. 864-869

Efficient parallel UPGMA algorithm based on multiple GPUs (Abstract)

Che-Lun Hung , Department of Computer Science and Communication Engineering, Providence University, Taichung City, Taiwan
Chun-Yuan Lin , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan
Fu-Che Wu , Department of Computer Science and Communication Engineering, Providence University, Taichung City, Taiwan
Yu-Wei Chan , Department of Computer Science and Information Management, Providence University, Taichung City, Taiwan
pp. 870-873

Mining sequential patterns from uncertain big DNA in the spark framework (Abstract)

Fan Jiang , Department of Computer Science, University of Manitoba, Winnipeg, Canada
Carson K. Leung , Department of Computer Science, University of Manitoba, Winnipeg, Canada
Oluwafemi A. Sarumi , Department of Computer Science, University of Manitoba, Winnipeg, Canada
Christine Y. Zhang , Max Rady College of Medicine, University of Manitoba, Winnipeg, Canada
pp. 874-881

K-mer Mapping and de Bruijn graphs: The case for velvet fragment assembly (Abstract)

Elvismary Molina de Armas , Departamento de Informática - PUC-Rio, Rio de Janeiro - Brasil
Edward Hermann Haeusler , Departamento de Informática - PUC-Rio, Rio de Janeiro - Brasil
Sergio Lifschitz , Departamento de Informática - PUC-Rio, Rio de Janeiro - Brasil
Maristela Terto de Holanda , Departamento de Ciência da Computação - UNB, Brasília - Brasil
Waldeyr Mendes Cordeiro da Silva , Departamento de Ciência da Computação - UNB, Brasília - Brasil
Paulo Cavalcanti Gomes Ferreira , Instituto de Bioquímica Médica Leopoldo de Meis - UFRJ, Rio de Janeiro - Brasil
pp. 882-889

The role of high performance, grid and cloud computing in high-throughput sequencing (Abstract)

Gaye Lightbody , School of Computing and Mathematics, University of Ulster, Newtownabbey, United Kingdom
Fiona Browne , School of Computing and Mathematics, University of Ulster, Newtownabbey, United Kingdom
Huiru Zheng , School of Computing and Mathematics, University of Ulster, Newtownabbey, United Kingdom
Valeriia Haberland , Tungsten Centre for Intelligent, Data Analytics, Goldsmiths, University of London, United Kingdom
Jaine Blayney , School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, UK
pp. 890-895

An evaluation of data replication for bioinformatics workflows on NoSQL systems (Abstract)

Iasmini Lima , University of Brasilia - Department of Computer Science, Brazil
Matheus Oliveira , University of Brasilia - Department of Computer Science, Brazil
Diego Kieckbusch , University of Brasilia - Department of Computer Science, Brazil
Maristela Holanda , University of Brasilia - Department of Computer Science, Brazil
Maria Emilia M. T. Walter , University of Brasilia - Department of Computer Science, Brazil
Aleteia Araujo , University of Brasilia - Department of Computer Science, Brazil
Marcio Victorino , University of Brasilia - Department of Computer Science, Brazil
Waldeyr M. C. Silva , University of Brasilia - Institute of Biological Sciences, Brazil
Sergio Lifschitz , Pontifical Catholic University of Rio de Janeiro - Department of Informatics, Brazil
pp. 896-901

Exploration of alternative GPU implementations of the pair-HMMs forward algorithm (Abstract)

Shanshan Ren , Computer Engineering Lab, Delft University of Technology, 2628CD,The Netherlands
Koen Bertel , Computer Engineering Lab, Delft University of Technology, 2628CD,The Netherlands
Zaid Al-Ars , Computer Engineering Lab, Delft University of Technology, 2628CD,The Netherlands
pp. 902-909

aWGRS: Automates paired-end whole genome re-sequencing data analysis framework (Abstract)

Xiujuan Sun , Institute of Computing Technology, Chinese Academy of Sciences, Beijing, 100080, China
Fa Zhang , Institute of Computing Technology, Chinese Academy of Sciences, Beijing, 100080, China
Xiaohua Wan , Institute of Computing Technology, Chinese Academy of Sciences, Beijing, 100080, China
Jinzhi Zhang , Key Laboratory of Horticultural Plant Biology, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan, 430070, China
pp. 910-916

Constructing a GPU cluster platform based on multiple NVIDIA Jetson TK1 (Abstract)

Kuan-Yu Yeh , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Hui-Jun Cheng , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Jin Ye , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Jyh-Da Wei , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Chun-Yuan Lin , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
pp. 917-922

Is EEG causal to fNIRs? (Abstract)

Borzou Alipourfard , Department of Computer Science and Engineering, University of Texas at Arlington, United States
Jean X. Gao , Department of Computer Science and Engineering, University of Texas at Arlington, United States
Olajide Babawale , Department of Bioengineering, University of Texas at Arlington, United States
Hanli Liu , Department of Bioengineering, University of Texas at Arlington, United States
pp. 923-929

Learning to predict the performance of clinical queries using an integrated approach (Abstract)

Mohammad Alsulmi , Department of Computer & Information Sciences, University of Delaware, Newark, USA
Ben Carterette , Department of Computer & Information Sciences, University of Delaware, Newark, USA
pp. 930-937

Android application for therapeutic feed and fluid calculation in neonatal care - a way to fast, accurate and safe health-care delivery (Abstract)

Arunava Biswas , School of Medical Science & Technology, Indian Institute of Technology, Kharagpur, India
Romil Roy , School of Medical Science & Technology, Indian Institute of Technology, Kharagpur, India
Sourya Bhattacharyya , Department of Computer Sc. & Engineering, Indian Institute of Technology, Kharagpur, India
Deepak Khaneja , Department of Computer Sc. & Engineering, Indian Institute of Technology, Kharagpur, India
Sangeeta Das Bhattacharya , School of Medical Science & Technology, Indian Institute of Technology, Kharagpur, India
Jayanta Mukhopadhyay , Department of Computer Sc. & Engineering, Indian Institute of Technology, Kharagpur, India
pp. 938-945

Clinical text mining for efficient extraction of drug-allergy reactions (Abstract)

Arantza Casillas , IXA taldea (http://ixa.si.ehu.eus) UPV-EHU; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
Koldo Gojenola , IXA taldea (http://ixa.si.ehu.eus) UPV-EHU; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
Alicia Perez , IXA taldea (http://ixa.si.ehu.eus) UPV-EHU; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
Maite Oronoz , IXA taldea (http://ixa.si.ehu.eus) UPV-EHU; P. Manuel Lardizabal, 1; 20018 Donostia, Spain
pp. 946-952

Exploring the shared neural basis between the positive and negative syndromes of schizophrenia using multi-task regression under the stability selection frame (Abstract)

Heng Chen , Key laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology and Center for Information in BioMedicine, University of Electronic Science and Technology of China, Chengdu 610054, China
Junjie Zheng , Key laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology and Center for Information in BioMedicine, University of Electronic Science and Technology of China, Chengdu 610054, China
Zhiliang Long , Key laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology and Center for Information in BioMedicine, University of Electronic Science and Technology of China, Chengdu 610054, China
Youxue Zhang , Key laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology and Center for Information in BioMedicine, University of Electronic Science and Technology of China, Chengdu 610054, China
Xiaonan Guo , Key laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology and Center for Information in BioMedicine, University of Electronic Science and Technology of China, Chengdu 610054, China
Huafu Chen , Key laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology and Center for Information in BioMedicine, University of Electronic Science and Technology of China, Chengdu 610054, China
pp. 953-955

Self-adjusting nuclei segmentation (SANS) of Hematoxylin-Eosin stained histopathological breast cancer images (Abstract)

Yuxin Cui , Department of Computer Science and Engineering, University of South Carolina, Columbia, USA
Jianjun Hu , Department of Computer Science and Engineering, University of South Carolina, Columbia, USA
pp. 956-963

The design and implementation of the privacy protection system of a Regional Health Information Platform (Abstract)

Shan Hu , Department of Biomedical Engineering, Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, China
Lin Zhou , Department of Biomedical Engineering, Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, China
Nan Dong , Department of Biomedical Engineering, Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, China
Yi Zhou , Department of Biomedical Engineering, Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, China
Zhaosheng Gao , Guangzhou Health Information Center, China
Jing Xu , Guangzhou Health Information Center, China
Zhiwei Liang , Dongguan & Guangzhou University of Chinese Medicine Cooperative, Academy of Mathematical and Engineering for Chinese Medicine, China
pp. 964-969

Periodicity intensity for indicating behaviour shifts from lifelog data (Abstract)

Feiyan Hu , Insight Centre for Data Analytics, Dublin City University, 9, Ireland
Alan F. Smeaton , Insight Centre for Data Analytics, Dublin City University, 9, Ireland
pp. 970-977

Reducing surgical-site infections for coronary artery bypass graft patients (Abstract)

Eva K Lee , Center for Operations Research in Medicine and HealthCare, USA
Zhuonan Li , Center for Operations Research in Medicine and HealthCare, USA
Ling Ling , Center for Operations Research in Medicine and HealthCare, USA
Ankit Agarwal , Center for Operations Research in Medicine and HealthCare, USA
Michael Wright , Grady Health System, Atlanta, GA, USA
Alexander Quarshie , Morehouse School of Medicine, Atlanta, GA, USA
pp. 978-985

Multi-label classification for intelligent health risk prediction (Abstract)

Runzhi Li , Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, China 450000
Hongling Zhao , Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, China 450000
Yusong Lin , Cooperative Innovation Center of Internet Healthcare, Zhengzhou University, China 450000
Andrew Maxwell , School of Computing, University of Southern Mississippi, USA
Chaoyang Zhang , School of Computing, University of Southern Mississippi, USA
pp. 986-993

CIDExtractor: A chemical-induced disease relation extraction system for biomedical literature (Abstract)

Zhiheng Li , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Zhihao Yang , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Hongfei Lin , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Jian Wang , College of Computer Science and Technology, Dalian University of Technology, China, 116023
Yingyi Gui , School of Optoelectronics, Beijing Institute of Technology, China 100081
Yin Zhang , Beijing Institute of Health Administration and Medical Information, China, 100850
Lei Wang , Beijing Institute of Health Administration and Medical Information, China, 100850
pp. 994-1001

Practical approach for disease similarity calculation based on disease phenotype, etiology, and locational clues in disease names (Abstract)

Mai Omura , Nara Institute of Science and Technology, Japan
Noboru Sonehara , National Institute of Informatics, Tokyo, Japan
Takashi Okumura , National Institute of Public Health, Saitama, Japan
pp. 1002-1009

A compact electronic medical record system for regional clinics and health centers in China: Design and its application (Abstract)

Lijun Pan , Dept. of Computer Science, Wenzhou-Kean University, China
Xiaoting Fu , Dept. of Computer Science, Wenzhou-Kean University, China
Fangfang Cai , University Clinic, Wenzhou-Kean University, China
Yu Meng , Dept. of Biology, Wenzhou-Kean University, China
Changjiang Zhang , Dept. of Computer Science, Wenzhou-Kean University, China
pp. 1010-1015

Acoustic emission sonification and magnetic resonance imaging-based kinematics for exploratory analysis of knee joints (Abstract)

Lik-Kwan Shark , Applied Digital Signal & Image Processing Research Centre, University of Central Lancashire, Preston, UK
Kai Huang , Applied Digital Signal & Image Processing Research Centre, University of Central Lancashire, Preston, UK
Wei Quan , Applied Digital Signal & Image Processing Research Centre, University of Central Lancashire, Preston, UK
John C. Waterton , Biomedical Imaging Institute, University of Manchester, UK
Michael A. Bowes , Imorphics Ltd, Manchester Science Park, UK
John Goodacre , Lancaster Health Hub, Lancaster University, UK
pp. 1016-1022

Design and development of ICU intelligent medicine management system based on MVC (Abstract)

Jingxia Wang , Xiangya Nursing College, Central South University, 410013, Changsha, China
Xiao Yu , The Third Xiangya Hospital, Central South University, 410013, Changsha, China
Lu Ren , Xiangya Nursing College, Central South University, 410013, Changsha, China
Siyuan Tang , Xiangya Nursing College, Central South University, 410013, Changsha, China
pp. 1023-1027

GIDAC: A prototype for bioimages annotation and clinical data integration (Abstract)

Patrizia Vizza , Department of Surgical and Medical Science, Magna Graecia University, Catanzaro, Italy
Pietro Hiram Guzzi , Department of Surgical and Medical Science, Magna Graecia University, Catanzaro, Italy
Pierangelo Veltri , Department of Surgical and Medical Science, Magna Graecia University, Catanzaro, Italy
Giuseppe L. Cascini , Department of Experimental and Clinical Medicine, Magna Graecia University, Catanzaro, Italy
Rosario Curia , H2i Srl Cosenza, Italy
Loredana Sisca , H2i Srl Cosenza, Italy
pp. 1028-1031

MICS: Medical image classification visual system (Abstract)

Wenbo Li , Department of College of Computer Science and Technology, Harbin Engineering University, 150001, China
Haiwei Pan , Department of College of Computer Science and Technology, Harbin Engineering University, 150001, China
Xiaoqin Xie , Department of College of Computer Science and Technology, Harbin Engineering University, 150001, China
Zhiqiang Zhang , Department of College of Computer Science and Technology, Harbin Engineering University, 150001, China
Qilong Han , Department of College of Computer Science and Technology, Harbin Engineering University, 150001, China
pp. 1032-1039

Modular reconfiguration of metabolic brain networks in health and cancer: A resting-state PET study (Abstract)

Zhijun Yao , School of Information Science and Engineering, Lanzhou University, China
Bin Hu , School of Information Science and Engineering, Lanzhou University, China
Xuejiao Chen , School of Information Science and Engineering, Lanzhou University, China
Yuanwei Xie , School of Information Science and Engineering, Lanzhou University, China
Lei Fang , PET/CT Center, Affiliated Lanzhou General Hospital of Lanzhou Military, Area Command, China
pp. 1040-1046

Triptolide targets on MYC towards testis may induce male reproductive toxicity (Abstract)

Guang Zheng , School of Information Science & Engineering, Lanzhou University, 730000, China
Minghui Yang , School of Information Science & Engineering, Lanzhou University, 730000, China
Yun Yang , School of Information Science & Engineering, Lanzhou University, 730000, China
Jihua Wang , The first affiliated hospital of Henan University of TCM, Zhengzhou, 450000, China
Hongtao Guo , The first affiliated hospital of Henan University of TCM, Zhengzhou, 450000, China
Xiaojuan He , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Beijing 100700, China
pp. 1047-1050

Ontological features of Electronic Health Records reveal distinct association patterns in liver cancer (Abstract)

Lawrence WC Chan , Department of Health Technology and Informatics, Hong Kong Polytechnic University, Hong Kong
SC Cesar Wong , Department of Health Technology and Informatics, Hong Kong Polytechnic University, Hong Kong
Keith WH Chiu , Department of Diagnostic Radiology, University of Hong Kong, Hong Kong
pp. 1051-1053

Classification of use status for dietary supplements in clinical notes (Abstract)

Yadan Fan , Institute for Health Informatics, University of Minnesota, Minneapolis, USA
Lu He , Department of Computer Science and Engineering, University of Minnesota, Minneapolis, USA
Rui Zhang , Institute for Health Informatics, Department of Surgery, University of Minnesota, Minneapolis, USA
pp. 1054-1061

A comprehensive (biological and computational) investigation on the role of microRNA::mRNA regulations performed in chronic obstructive pulmonary disease and lung cancer (Abstract)

Jingshan Huang , Computer Science Department, School of Computing, University of South Alabama, Mobile, 36688, U.S.A.
Dejing Dou , Computer and Information Science Department, University of Oregon, Eugene, 97403, U.S.A.
Jun She , Department of Pulmonary Medicine, Affiliated Zhongshan Hospital of Fudan University, Shanghai, 200032, China
Andrew H. Limper , Pulmonary and Critical Care Medicine, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, U.S.A.
Yanan Yang , Pulmonary and Critical Care Medicine, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, U.S.A.
Ping Yang , Division of Epidemiology, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, U.S.A.
pp. 1062-1067

The utilization of the OmniSearch semantic search tool to explore various microRNA regulation mechanisms in osteoarthritis (Abstract)

Jingshan Huang , Computer Science Department, School of Computing, University of South Alabama, Mobile, 36688, U.S.A.
Bi Liu , Department of Orthopedics, Shenzhen Luohu People's Hospital, Guangdong 518001, China
Yang Liu , Department of Orthopedics, Shenzhen People's Hospital, The Second Clinical Medical College at Jinan University, Guangdong 518109, China
Ji Chen , Department of Orthopedics, Shenzhen People's Hospital, The Second Clinical Medical College at Jinan University, Guangdong 518109, China
pp. 1068-1073

Dependency-based convolutional neural network for drug-drug interaction extraction (Abstract)

Shengyu Liu , Intelligent Computing Research Center, Harbin Institute of Technology Shenzhen Graduate School, 518055, China
Kai Chen , Intelligent Computing Research Center, Harbin Institute of Technology Shenzhen Graduate School, 518055, China
Qingcai Chen , Intelligent Computing Research Center, Harbin Institute of Technology Shenzhen Graduate School, 518055, China
Buzhou Tang , Intelligent Computing Research Center, Harbin Institute of Technology Shenzhen Graduate School, 518055, China
pp. 1074-1080

Towards an obesity-cancer knowledge base: Biomedical entity identification and relation detection (Abstract)

Juan Antonio Lossio-Ventura , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
William Hogan , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
Francois Modave , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
Amanda Hicks , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
Josh Hanna , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
Yi Guo , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
Zhe He , School of Information, Florida State University, Tallahassee, USA
Jiang Bian , Health Outcomes & Policy, College of Medicine, University of Florida, Gainesville, USA
pp. 1081-1088

A representational analysis of a temporal indeterminancy display in clinical events (Abstract)

Mohcine Madkour , School of Biomedical Informatics, University of Texas Health, Science Center at Houston, USA
Hsing-yi Song , School of Biomedical Informatics, University of Texas Health, Science Center at Houston, USA
Jingcheng Du , School of Biomedical Informatics, University of Texas Health, Science Center at Houston, USA
Cui Tao , School of Biomedical Informatics, University of Texas Health, Science Center at Houston, USA
pp. 1089-1095

Exploiting distributional semantics to benefit machine learning in automated classification of Chinese clinical text (Abstract)

Wenxin Ning , Department of Industrial Engineering, Tsinghua University, Beijing, China
Ming Yu , Department of Industrial Engineering, Tsinghua University, Beijing, China
pp. 1096-1102

On the identification of long non-coding RNAs from RNA-seq (Abstract)

Francesca Cristiano , Department of Surgical and Medical Science, Magna Graecia University of Catanzaro, Italy
Pierangelo Veltri , Department of Surgical and Medical Science, Magna Graecia University of Catanzaro, Italy
Mattia Prosperi , Department of Epidemiology, University of Florida, USA
Giuseppe Tradigo , Department of Epidemiology, University of Florida, USA
pp. 1103-1106

Compression-based distance methods as an alternative to statistical methods for constructing phylogenetic trees (Abstract)

Mohamed El-Dirany , Department of Computer Science, Princeton University, New Jersey 08540, USA
Forrest Wang , Department of Computer Science, University of Pittsburgh, Pennsylvania 15213, USA
Jacob Furst , College of Computing and Digital Media, DePaul University, Chicago, Illinois 60604, USA
John Rogers , College of Computing and Digital Media, DePaul University, Chicago, Illinois 60604, USA
Daniela Raicu , College of Computing and Digital Media, DePaul University, Chicago, Illinois 60604, USA
pp. 1107-1112

MTBGD: Mutli Type Biclustering for Genomic Data (Abstract)

Syeda Bintul Huda , Department of Biosciences, COMSATS Institute of Information Technology Islamabad Campus, COMSATS Institute of Information Technology, Park Road, Pakistan
Nighat Noureen , Department of Biosciences, COMSATS Institute of Information Technology Islamabad Campus, COMSATS Institute of Information Technology, Park Road, Pakistan
pp. 1113-1119

Immune based prognostic biomarkers for multiple anticancer therapies in lung adenocarcinoma (Abstract)

Kritika Karri , College of Information Science and Technology, University of Nebraska at Omaha, USA
Dhundy R Bastola , College of Information Science and Technology, University of Nebraska at Omaha, USA
pp. 1120-1127

K2: Efficient alignment-free sequence similarity measurement using the Kendall statistic (Abstract)

Jie Lin , Faculty of Software, Fujian Normal University, Fuzhou 350108, China
Donald A Adjeroh , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, USA
Bing-Hua Jiang , Thomas Jefferson University, Philadelphia, PA 19107, USA
Yue Jiang , Faculty of Software, Fujian Normal University, Fuzhou 350108, China
pp. 1128-1132

IMDBfs: Bridging the gap between in-memory database technology and file-based tools for life sciences (Abstract)

Matthieu-P. Schapranow , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Milena Kraus , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Marius Danner , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Hasso Plattner , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
pp. 1133-1139

A global approach for determining protein function (Abstract)

Kamal Hassan Tahr , ECE, Khalifa University, UAE
pp. 1140-1147

Experiences on quantitative cardiac PET analysis (Abstract)

Patrizia Vizza , Department of Surgical and Medical Science, Magna Graecia University, Catanzaro, Italy
Pietro Hiram Guzzi , Department of Surgical and Medical Science, Magna Graecia University, Catanzaro, Italy
Pierangelo Veltri , Department of Surgical and Medical Science, Magna Graecia University, Catanzaro, Italy
Annalisa Papa , Department of Experimental and Clinical Medicine, Magna Graecia University, Catanzaro, Italy
Giuseppe Lucio Cascini , Department of Experimental and Clinical Medicine, Magna Graecia University, Catanzaro, Italy
Giorgio Sesti , Department of Surgical and Medical Science, Internal Medicine, Magna Graecia University, Catanzaro, Italy
Elena Succurro , Department of Surgical and Medical Science, Internal Medicine, Magna Graecia University, Catanzaro, Italy
pp. 1148-1153

Factorial analysis of error correction performance using simulated next-generation sequencing data (Abstract)

Isaac Akogwu , School of Computing, University of Southern Mississippi, Hattiesburg, USA
Nan Wang , School of Computing, University of Southern Mississippi, Hattiesburg, USA
Chaoyang Zhang , School of Computing, University of Southern Mississippi, Hattiesburg, USA
Hwanseok Choi , Department of Public Health, University of Southern Mississippi, Hattiesburg, USA
Huixiao Hong , Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, AR, USA
Ping Gong , Environmental Laboratory, U.S. Army Engineer Research and Development Center, Vicksburg, MS, USA
pp. 1164-1169

Classification of tongue images based on doublet and color space dictionary (Abstract)

Guitao Cao , School of Computer Science and Software Engineering, East China Normal University, Shanghai 200062, China
Jie Ding , School of Computer Science and Software Engineering, East China Normal University, Shanghai 200062, China
Ye Duan , Department of Computer Science, University of Missouri, Columbia, MO65211, USA
Liping Tu , Department of Computer Science, University of Missouri, Columbia, MO65211, USA
Jiatuo Xu , Department of TCM Information and Technology Center, Shanghai University of TCM, China
Dong Xu , Department of Computer Science, University of Missouri, Columbia, MO65211, USA
pp. 1170-1175

Healthcare monitoring based on digital transactions at pharmacies: Malaria in Kigali (Abstract)

Danny Habamwabo , Carnegie Institute of Technology, Carnegie Mellon University, Kigali, Rwanda
Patrick McSharry , Carnegie Institute of Technology, Carnegie Mellon University, Kigali, Rwanda
pp. 1176-1183

Identification of discriminative genes for predicting breast cancer subtypes (Abstract)

Roohollah Etemadi , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario N9B 3P4, Canada
Abedalrhman Alkhateeb , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario N9B 3P4, Canada
Iman Rezaeian , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario N9B 3P4, Canada
Luis Rueda , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario N9B 3P4, Canada
pp. 1184-1188

Multidimensional visual tool for analysis of a complex program in Clinical & Translational research (Abstract)

Chunlei Liu , Intelligent Automation Inc., Rockville, MD, United States
Lemin Xiao , Intelligent Automation Inc., Rockville, MD, United States
Roger Xu , Intelligent Automation Inc., Rockville, MD, United States
Pan Gao , Intelligent Automation Inc., Rockville, MD, United States
Ken Samuel , Intelligent Automation Inc., Rockville, MD, United States
Olga Brazhnik , National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States
pp. 1194-1200

Assessing stress levels via speech using three reading patterns (Abstract)

Zhenyu Liu , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Lihua Yan , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Tianyang Wang , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Bin Hu , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Fei Liu , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
pp. 1201-1206

Assessing the public image of the NIH Clinical and Translational Science Awards (CTSA) program through analysis of publications (Abstract)

Chunlei Liu , Intelligent Automation Inc., Rockville, MD, United States
Lemin Xiao , Intelligent Automation Inc., Rockville, MD, United States
Roger Xu , Intelligent Automation Inc., Rockville, MD, United States
Olga Brazhnik , National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, United States
pp. 1207-1213

Finding group structures in “Big Data” in healthcare research using mixture models (Abstract)

Shu-Kay Ng , School of Medicine, Menzies Health Institute Queensland, Griffith University, Nathan, 4111, Australia
Geoffrey J McLachlan , Department of Mathematics, University of Queensland, Brisbane, 4072, Australia
pp. 1214-1219

Benchmarking platform for ligand-based virtual screening (Abstract)

Petr Skoda , Faculty of Mathematics and Physics, Charles University, Prague, Czech Republic
David Hoksza , Faculty of Mathematics and Physics, Charles University, Prague, Czech Republic
pp. 1220-1227

Automatic fall detection of human in video using combination of features (Abstract)

Kun Wang , School of Computer Science and Software Engineering, EAST CHINA NORMAL UNIVERSITY, Shanghai, China 200062
Guitao Cao , School of Computer Science and Software Engineering, EAST CHINA NORMAL UNIVERSITY, Shanghai, China 200062
Dan Meng , School of Computer Science and Software Engineering, EAST CHINA NORMAL UNIVERSITY, Shanghai, China 200062
Weiting Chen , School of Computer Science and Software Engineering, EAST CHINA NORMAL UNIVERSITY, Shanghai, China 200062
Wenming Cao , College of Information Engineering, Shenzhen University, 518060, China
pp. 1228-1233

Using the machine learning approach to predict patient survival from high-dimensional survival data (Abstract)

Wenbin Zhang , Department of Computer Science, Memorial University of Newfoundland, St. John's, NL, Canada
Jian Tang , Department of Computer Science, Memorial University of Newfoundland, St. John's, NL, Canada
Nuo Wang , Department of Computer Science, Memorial University of Newfoundland, St. John's, NL, Canada
pp. 1234-1238

Pervasive EEG diagnosis of depression using Deep Belief Network with three-electrodes EEG collector (Abstract)

Hanshu Cai , School of Information Science and Engineering, Lanzhou University, China
Xiaocong Sha , School of Information Science and Engineering, Lanzhou University, China
Xue Han , School of Information Science and Engineering, Lanzhou University, China
Shixin Wei , School of Information Science and Engineering, Lanzhou University, China
Bin Hu , School of Information Science and Engineering, Lanzhou University, China
pp. 1239-1246

Epistasis detection using a permutation-based Gradient Boosting Machine (Abstract)

Kai Che , Computer Science and Technology Department, Harbin Institute of Technology, China 150001
Xiaoyan Liu , Computer Science and Technology Department, Harbin Institute of Technology, China 150001
Maozu Guo , Computer Science and Technology Department, Harbin Institute of Technology, China 150001
Junwei Zhang , Computer Science and Technology Department, Harbin Institute of Technology, China 150001
Lei Wang , Institute of Health Service and Medical Information, Academy of Military Medical Sciences, Beijing, China 100850
Yin Zhang , Institute of Health Service and Medical Information, Academy of Military Medical Sciences, Beijing, China 100850
pp. 1247-1252

Robust graph regularized discriminative nonnegative matrix factorization for characteristic gene selection (Abstract)

Ling-Yun Dai , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Chun-Mei Feng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Chun-Hou Zheng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Mi-Xiao Hou , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Jiguo Yu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
pp. 1253-1258

Identifying disease genes from PPI networks weighted by gene expression under different conditions (Abstract)

Ping Luo , Division of Biomedical Engineering, University of Saskatchewan, Sakatoon, Canada S7N 5A9
Li-Ping Tian , School of Information, Beijing Wuzi University, 101149, China
Jishou Ruan , Schoole of Mathematical Sciences, Nankai University, Tianjin, 300071, China
Fang-Xiang Wu , Schoole of Mathematical Sciences, Nankai University, Tianjin, 300071, China
pp. 1259-1264

Cancer genes discovery based on integtating transcriptomic data and the impact of gene length (Abstract)

Pi-Jing Wei , College of Electrical Engineering and Automation, Anhui University, Hefei, China
Di Zhang , College of Computer Science and Technology, Anhui University, Hefei, China
Chun-Hou Zheng , College of Computer Science and Technology, Anhui University, Hefei, China
Junfeng Xia , Institute of Health Sciences, Anhui University, Hefei, China
pp. 1265-1268

A novel identified temporal protein complexes strategy inspired by density-distance and brainstorming process (Abstract)

Xianjun Shen , School of Computer, Central China Normal University, Wuhan, China
Jin Zhou , School of Computer, Central China Normal University, Wuhan, China
Xingpeng Jiang , School of Computer, Central China Normal University, Wuhan, China
Xiaohua Hu , School of Computer, Central China Normal University, Wuhan, China
Tingting He , School of Computer, Central China Normal University, Wuhan, China
Jincai Yang , School of Computer, Central China Normal University, Wuhan, China
Dan Xie , College of Information Engineering, Hubei University of Chinese Medicine, Wuhan, China
pp. 1269-1274

An EEG-based study on coherence and brain networks in mild depression cognitive process (Abstract)

Xiaowei Li , School of Information Science & Engineering, Lanzhou University, China
Zhuang Jing , School of Information Science & Engineering, Lanzhou University, China
Bin Hu , School of Information Science & Engineering, Lanzhou University, China
Shuting Sun , School of Information Science & Engineering, Lanzhou University, China
pp. 1275-1282

Walking in the PPI network to identify the risky SNP of osteoporosis with decision tree algorithm (Abstract)

Jincai Yang , School of Computer Science, Central China Normal University, Wuhan, China
Huichao Gu , School of Computer Science, Central China Normal University, Wuhan, China
Xingpeng Jiang , School of Computer Science, Central China Normal University, Wuhan, China
Qingyang Huang , School of Computer Science, Central China Normal University, Wuhan, China
Xiaohua Hu , School of Computer Science, Central China Normal University, Wuhan, China
Xianjun Shen , School of Computer Science, Central China Normal University, Wuhan, China
pp. 1283-1287

Identifying protein complexes in dynamic protein-protein interaction networks based on Cuckoo Search algorithm (Abstract)

Jie Zhao , School of Computer Science, Shaanxi Normal University, Xi'an, 710119, China
Xiujuan Lei , School of Computer Science, Shaanxi Normal University, Xi'an, 710119, China
Fang-Xiang Wu , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
pp. 1288-1295

Disease-specific protein complex detection in the human protein interaction network with a supervised learning method (Abstract)

Ziwei Zhou , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Yingyi Gui , School of Optoelectronics, Beijing Institute of Technology, China 100081
Zhihao Yang , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Xiaoxia Liu , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Lei Wang , Beijing Institute of Health Administration and Medical Information, China, 100850
Yin Zhang , Beijing Institute of Health Administration and Medical Information, China, 100850
Hongfei Lin , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Jian Wang , College of Computer Science and Technology, Dalian University of Technology, 116024, China
pp. 1296-1301

Transcriptional responses to ultraviolet and ionizing radiation: An approach based on graph curvature (Abstract)

Yongxin Chen , Department of Medical Physics, Memorial Sloan Kettering Cancer Center, NY, USA
Jung Hun Oh , Department of Medical Physics, Memorial Sloan Kettering Cancer Center, NY, USA
Romeil Sandhu , Department of Biomedical Informatics, Stony Brook University, NY, USA
Sangkyu Lee , Department of Medical Physics, Memorial Sloan Kettering Cancer Center, NY, USA
Joseph O. Deasy , Department of Medical Physics, Memorial Sloan Kettering Cancer Center, NY, USA
Allen Tannenbaum , Department of Computer Science and Applied Mathematics & Statistics, Stony Brook University, NY, USA
pp. 1302-1306

Diagnosing schizophrenia by integrating genomic and imaging data through network fusion (Abstract)

Su-Ping Deng , Department of Biomedical Engineering, School of Science and Engineering, Tulane University, New Orleans, Louisiana 70118, United States
Dongdong Lin , The MIND research network, Albuquerque, New Mexico 87106, United States
Vince D. Calhoun , The MIND research network, Albuquerque, New Mexico 87106, United States
Yu-Ping Wang , Department of Biomedical Engineering, School of Science and Engineering, Tulanei University, New Orleans, Louisiana 70118, United States
pp. 1307-1313

Filtering association rules in Gene Ontology based on term specificity (Abstract)

Yong Shui , Department of Computer Science, Baylor University, Waco, TX, USA
Young-Rae Cho , Department of Computer Science, Baylor University, Waco, TX, USA
pp. 1314-1321

2Path: A terpenoid metabolic network modeled as graph database (Abstract)

Waldeyr Silva , University of Brasilia - Institute of Biological Sciences, Brazil
Danilo Vilar , University of Brasilia - Department of Computer Science, Brazil
Daniel Souza , University of Brasilia - Department of Computer Science, Brazil
Maria Emilia Walter , University of Brasilia - Department of Computer Science, Brazil
Marcelo Brigido , University of Brasilia - Institute of Biological Sciences, Brazil
Maristela Holanda , University of Brasilia - Department of Computer Science, Brazil
pp. 1322-1327

Individual metabolic network for the accurate detection of Alzheimer's disease based on FDGPET imaging (Abstract)

Zhijun Yao , School of Information Science and Engineering, Lanzhou University, China
Bin Hu , School of Information Science and Engineering, Lanzhou University, China
Huailiang Nan , School of Information Science and Engineering, Lanzhou University, China
Weihao Zheng , School of Information Science and Engineering, Lanzhou University, China
Yuanwei Xie , School of Information Science and Engineering, Lanzhou University, China
pp. 1328-1335

Integrative Gene Regulatory Network inference using multi-omics data (Abstract)

Neda Zarayeneh , Department of Computer Science, Texas A&M University-Commerce, USA
Jung Hun Oh , Department of Medical Physics, Memorial Sloan Kettering Cancer Center, NY, USA
Donghyun Kim , Department of Computer Science, Kennesaw State University, Marietta, GA, USA
Chunyu Liu , Department of Psychiatry, University of Illinois at Chicago, USA
Jean Gao , Department of Computer Science and Engineering, University of Texas at Arlington, USA
Sang C. Suh , Department of Computer Science, Texas A&M University-Commerce, USA
Mingon Kang , Department of Computer Science, Kennesaw State University, Marietta, GA, USA
pp. 1336-1340

The overview of research progress of the relationship between HBP and inspection information (Abstract)

Zhu Dihui , Shanghai University of Traditional Chinese Medicine, SHUTCM, China
Li Xueping , Shanghai University of Traditional Chinese Medicine, SHUTCM, China
Xu Zhaoxia , Shanghai University of Traditional Chinese Medicine, SHUTCM, China
Wang Yiqin , Shanghai University of Traditional Chinese Medicine, SHUTCM, China
Xu Jin , Shanghai University of Traditional Chinese Medicine, SHUTCM, China
pp. 1341-1345

Tongue, complexion and pulse research of Chronic Gastritis based on spectral clustering and modularity (Abstract)

Wei-jie Gu , Basic Medical College, Shanghai University of Traditional Chinese Medicine, China
Wu Zheng , Basic Medical College, Shanghai University of Traditional Chinese Medicine, China
Peng Qian , Basic Medical College, Shanghai University of Traditional Chinese Medicine, China
Wei-fei Xu , Basic Medical College, Shanghai University of Traditional Chinese Medicine, China
Guo-Ping Liu , Basic Medical College, Shanghai University of Traditional Chinese Medicine, China
Jian-Jun Yan , Center for Mechatronics Engineering, East China University of Science and Technology, China
Tao Zhong , Center for Mechatronics Engineering, East China University of Science and Technology, China
Yan Liu , Shanghai Municipal Hospital of Traditional Chinese Medicine, China
pp. 1346-1349

A hybrid iterative approach for microarray missing value estimation (Abstract)

Chong He , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Changbo Zhao , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Guo-Zheng Li , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Wei Zhu , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
William Yang , Joint Bioinformatics Ph.D. Program, George Washington Donaghey College of Engineering & IT, University of Arkansas at Little Rock, 2801 S. University Avenue, 72204 United States
Mary Qu Yang , Joint Bioinformatics Ph.D. Program, George Washington Donaghey College of Engineering & IT, University of Arkansas at Little Rock, 2801 S. University Avenue, 72204 United States
pp. 1350-1352

Wide line detection with water flow (Abstract)

Yangyang Hu , Shanghai Key Lab of Intelligent Information Processing, Fudan University, China
Wenqiang Zhang , Shanghai Key Lab of Intelligent Information Processing, Fudan University, China
Hong Lu , Shanghai Key Lab of Intelligent Information Processing, Fudan University, China
Fufeng Li , Laboratory of TCM four Processing, Shanghai university of TCM, China
Weifei Zhang , Laboratory of TCM four Processing, Shanghai university of TCM, China
pp. 1353-1355

Comparing of feature selection and classification methods on report-based subhealth data (Abstract)

Li Huang , Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
Shixing Yan , Data Center of TCM, China Academy of Chinese Medical Science, Beijing, 100700, China
Jiamin Yuan , Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
Zhiya Zuo , Data Center of TCM, China Academy of Chinese Medical Science, Beijing, 100700, China
Fuping Xu , Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
Yanzhao Lin , Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
Mary Qu Yang , University of Arkansas at Little Rock, United States
Zhimin Yang , Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
Guo-Zheng Li , Data Center of TCM, China Academy of Chinese Medical Science, Beijing, 100700, China
pp. 1356-1358

Effects of Bo's abdominal acupuncture on post-stroke fatigue: A pilot study (Abstract)

Zhen Huang , Department of Rehabilitation, Foshan Hospital of Traditional Chinese Medicine, 528000, China
Jie Zhan , Department of Neurology, Foshan Hospital of Traditional Chinese Medicine, Guangzhou University of Chinese Medicine, 528000, China
Ruihuan Pan , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Youhua Guo , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Mingfeng He , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Hongxia Chen , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Lechang Zhan , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
pp. 1359-1362

Treating obesity with Acupuncture and moxibustion (Abstract)

Jiaxin Chan , The Second College of Clinical Medicine, Guangzhou University of Chinese Medicine, China
Hanlin Wang , The Second College of Clinical Medicine, Guangzhou University of Chinese Medicine, China
pp. 1363-1364

Prediction of the efficacy of Wuji Pills by machine learning methods (Abstract)

Haiqing Li , Department of Control Science and Engineering, Tongji University, Shanghai, China
Guo-Zheng Li , Department of Control Science and Engineering, Tongji University, Shanghai, China
William Yang , School of Computer Science, Carnegie Mellon University, Pittsburgh PA, 15213 United States
Ying Chen , Institute of Chinese Materia Medica, China Academy of Chinese Medical Science, Beijing, China
Xiaoxin Zhu , Institute of Chinese Materia Medica, China Academy of Chinese Medical Science, Beijing, China
Mary Qu Yang , Joint Bioinformatics Ph.D. Program, George Washington Donaghey College of Engineering & IT, University of Arkansas at Little Rock, 2801 S. University Avenue, 72204 United States
pp. 1372-1374

The immediate effects of Traditional Bone Setting in patients with acute low back pain (Abstract)

Weifeng Lin , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Jiayou Zhao , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Qiang Tian , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Kiu Lam Chung , The Chinese University of Hong Kong Hong Kong
Zhiyong Fan , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Shuhua Lai , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Rusong Guo , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Li Li , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Jinling Wang , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
Shan Wu , The 2nd Affiliated Hospital of Guangzhou University of Chinese Medicine, 510120, China
pp. 1375-1377

Similarity-based algorithms for Disease Terminology Mapping (Abstract)

Shiwen Ma , School of Computer and Information Technology and Beijing Key Lab of Traffic Data Analysis and Mining, Beijing Jiaotong University, 100044, China
Kuo Yang , School of Computer and Information Technology and Beijing Key Lab of Traffic Data Analysis and Mining, Beijing Jiaotong University, 100044, China
Xuezhong Zhou , School of Computer and Information Technology and Beijing Key Lab of Traffic Data Analysis and Mining, Beijing Jiaotong University, 100044, China
Xue Xu , Beijing University of Chinese Medicine, 100029, China
Wenwen Liu , School of Computer and Information Technology and Beijing Key Lab of Traffic Data Analysis and Mining, Beijing Jiaotong University, 100044, China
pp. 1378-1384

Study on distribution rules of TCM four diagnostic information based on complex network in patients with CHD angina pectoris (Abstract)

Tao Yang , Institute of Information and Technology, Nanjing University of Chinese Medicine, China
Kongfa Hu , Institute of Information and Technology, Nanjing University of Chinese Medicine, China
pp. 1385-1388

The application of finite element analysis in the study of Chinese spinal manipulation (Abstract)

Qiang Tian , The Second Affiliated Hospital, Guangzhou University of Chinese Medicine, China, 510120
Qiaolin Zhong , School of Chinese Medicine, The Chinese University of Hong Kong, China, 999077
Jiayou Zhao , The Second Affiliated Hospital, Guangzhou University of Chinese Medicine, China, 510120
Zhiyong Fan , The Second Affiliated Hospital, Guangzhou University of Chinese Medicine, China, 510120
Rusong Guo , The Second Affiliated Hospital, Guangzhou University of Chinese Medicine, China, 510120
Zhenbao Li , The Second Affiliated Hospital, Guangzhou University of Chinese Medicine, China, 510120
Shan Wu , The Second Affiliated Hospital, Guangzhou University of Chinese Medicine, China, 510120
pp. 1389-1393

Relation extraction from Traditional Chinese Medicine journal publication (Abstract)

Jingcheng Wang , School of Information Technologies, The University of Sydney, Australia
Josiah Poon , School of Information Technologies, The University of Sydney, Australia
pp. 1394-1398

Design and implementation of the platform for collection and analysis of the Inpatient Medical Record Home Page of Traditional Chinese Medicine (Abstract)

Jiadong Xie , Nanjing University of Chinese Medicine, China
Kongfa Hu , Nanjing University of Chinese Medicine, China
Peipei Fang , Nanjing University of Chinese Medicine, China
Guozheng Li , China Academy of Chinese Medical Sciences, Beijing, China
Baoyan Liu , China Academy of Chinese Medical Sciences, Beijing, China
pp. 1399-1402

Research on traditional Chinese medicine syndrome factors in cognitive disorder after apoplexy based on TCMISS (Abstract)

Si-Lu Yang , Information Center, Beijing University of Chinese Medicine, China
Chao-Lu-Men Han , Information Center, Beijing University of Chinese Medicine, China
Shu-Zhen Li , Information Center, Beijing University of Chinese Medicine, China
Ai-Ping Chen , Information Center, Beijing University of Chinese Medicine, China
Yue Liu , Encephalopathy Department, Dongfang Hospital Affiliated to Beijing University of Chinese Medicine, China
Yun-Ling Zhang , Encephalopathy Department, Dongfang Hospital Affiliated to Beijing University of Chinese Medicine, China
pp. 1403-1405

Visualized analysis of incomplete TCM meridian conductance data (Abstract)

Jiamin Yuan , Guangdong Province Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
Jiachang Chen , Department of Control Science & Engineering Tongji University, Shanghai, 201804 China
Li Huang , Department of Control Science & Engineering Tongji University, Shanghai, 201804 China
Fuping Xu , Department of Control Science & Engineering Tongji University, Shanghai, 201804 China
Mary Qu Yang , University of Arkansas at Little Rock, United States
Shixing Yan , Department of Control Science & Engineering Tongji University, Shanghai, 201804 China
Guo-Zheng Li , Department of Control Science & Engineering Tongji University, Shanghai, 201804 China
Zhimin Yang , Guangdong Province Hospital of Traditional Chinese Medicine, Guangzhou, 510000 China
pp. 1406-1408

Triptolide regulates immune response network against systemic lupus erythematosus (Abstract)

Guang Zheng , School of Information Science & Engineering, Lanzhou University, 730000, China
Zhibin Wang , School of Information Science & Engineering, Lanzhou University, 730000, China
Chengqiang Li , School of Information Science & Engineering, Lanzhou University, 730000, China
Hongtao Guo , The first affiliated hospital of Henan University of TCM, Zhengzhou, 450000, China
Jihua Wang , The first affiliated hospital of Henan University of TCM, Zhengzhou, 450000, China
Xiaojuan He , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Beijing 100700, China
pp. 1409-1414

A study of damp-heat syndrome classification using Word2vec and TF-IDF (Abstract)

Wei Zhu , Department of Control Science and Engineering, TongJi University, Shanghai 201804, China
Wei Zhang , Department of Control Science and Engineering, TongJi University, Shanghai 201804, China
Guo-Zheng Li , Department of Control Science and Engineering, TongJi University, Shanghai 201804, China
Chong He , Department of Control Science and Engineering, TongJi University, Shanghai 201804, China
Lei Zhang , Institute of Basic Research in Clinical Medicine, China Academy of Chinese Medical Sciences, Beijing 100700, China
pp. 1415-1420

A comparison of seed-and-extend techniques in modern DNA read alignment algorithms (Abstract)

Nauman Ahmed , Computer Engineering Lab, Delft University of Technology, 2628CD, The Netherlands
Koen Bertels , Computer Engineering Lab, Delft University of Technology, 2628CD, The Netherlands
Zaid Al-Ars , Computer Engineering Lab, Delft University of Technology, 2628CD, The Netherlands
pp. 1421-1428

DNA mapping using Processor-in-Memory architecture (Abstract)

Dominique Lavenier , IRISA / CNRS, Rennes - France
Jean-Francois Roy , UPMEM, Grenoble - France
David Furodet , UPMEM, Grenoble - France
pp. 1429-1435

The need of accelerators in analyzing biological networks (Abstract)

Jian-Yu Shi , School of Life Sciences, Northwestern Polytechnical University, Xi'an, China
pp. 1436

GBOOST 2.0: A GPU-based tool for detecting gene-gene interactions with covariates adjustment in genome-wide association studies (Abstract)

Meng Wang , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Wei Jiang , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
Ronald Ching Wan Ma , Department of Medicine and Therapeutics, The Chinese University of Hong Kong, China
Weichuan Yu , Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, China
pp. 1437

Multiple sequence alignment and reconstructing phylogenetic trees with Hadoop (Abstract)

Quan Zou , School of Computer Science and Technology, Tianjin University, China
pp. 1438

Multi-scale cardiac modelling reveal tachyarrhythmias induced by abrupt rate accelerations in long QT syndrome (Abstract)

Jieyun Bai , School of Computer Science and Technology, Harbin Institute of Technology, China
Kuanquan Wang , School of Computer Science and Technology, Harbin Institute of Technology, China
Henggui Zhang , School of Computer Science and Technology, Harbin Institute of Technology, China
pp. 1439-1444

CyberCardia project: Modeling, verification and validation of implantable cardiac devices (Abstract)

Md. Ariful Islam , Carnegie Mellon University, United States
Hyunkyung Lim , Stony Brook University, United States
Nicola Paoletti , Stony Brook University, United States
Houssam Abbas , University of Pennsylvania, United States
Zhihao Jiang , University of Pennsylvania, United States
Jacek Cyranka , Rutgers University, United States
Rance Cleaveland , University of Maryland, United States
Sicun Gao , Massachusetts Institute of Technology, United States
Edmund Clarke , Carnegie Mellon University, United States
Radu Grosu , Vienna University of Technology, Austria
Rahul Mangharam , University of Pennsylvania, United States
Elizabeth Cherry , Rochester Institute of Technology, United States
Flavio Fenton , Georgia Institute of Technology, United States
Richard A. Gray , U.S. Food and Drug Administration, United States
James Glimm , Stony Brook University, United States
Shan Lin , Stony Brook University, United States
Qinsi Wang , Carnegie Mellon University, United States
Scott A. Smolka , Stony Brook University, United States
pp. 1445-1452

Parameter estimation of rule-based models using statistical model checking (Abstract)

Bing Liu , Department of Computational & Systems Biology, School of Medicine, University of Pittsburgh, PA 15213, U.S.A.
James R. Faeder , Department of Computational & Systems Biology, School of Medicine, University of Pittsburgh, PA 15213, U.S.A.
pp. 1453-1459

Energy-based modeling in BioNetGen (Abstract)

John A.P. Sekar , Department of Computational & Systems Biology, University of Pittsburgh School of Medicine, PA 15260 USA
Justin S. Hogg , Department of Computational & Systems Biology, University of Pittsburgh School of Medicine, PA 15260 USA
James R. Faeder , Department of Computational & Systems Biology, University of Pittsburgh School of Medicine, PA 15260 USA
pp. 1460-1467

A network analysis of methane and feed conversion genes in the rumen microbial community (Abstract)

Fiona Browne , School of Computing and Mathematics, Computer Science Research Institute, Ulster University, UK
Haiying Wang , School of Computing and Mathematics, Computer Science Research Institute, Ulster University, UK
Huiru Zheng , School of Computing and Mathematics, Computer Science Research Institute, Ulster University, UK
Rainer Roehe , Future Farming Systems, Scotland's Rural College, Edinburgh, United Kingdom
Richard J. Dewhurst , Future Farming Systems, Scotland's Rural College, Edinburgh, United Kingdom
Paul Walsh , NSilico Life Science Ltd., Cork, Ireland
pp. 1477-1484

A method of removing Ocular Artifacts from EEG using Discrete Wavelet Transform and Kalman Filtering (Abstract)

Yan Chen , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Qinglin Zhao , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Bin Hu , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Jianpeng Li , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Hua Jiang , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Wenhua Lin , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Yang Li , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Shuangshuang Zhou , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
Hong Peng , Laboratory of Ubiquitous Awareness and Intelligent Solutions, Lanzhou University, 730000, China
pp. 1485-1492

Schizophrenia genes discovery by mining the minimum spanning trees from multi-dimensional imaging genomic data integration (Abstract)

Su-Ping Deng , Department of Biomedical Engineering, School of Science and Engineering, Tulane University, New Orleans, Louisiana 70118, United States
Dongdong Lin , The MIND research network, Albuquerque, New Mexico 87106, United States
Vince D. Calhoun , The MIND research network, Albuquerque, New Mexico 87106, United States
Yu-Ping Wang , Department of Biomedical Engineering, School of Science and Engineering, Tulanei University, New Orleans, Louisiana 70118, United States
pp. 1493-1500

Effects of propafenone on KCNH2-linked short QT syndrome: A modelling study (Abstract)

Cunjin Luo , School of Computer Science and Technology, Harbin Institute of Technology, HIT, China
Kuanquan Wang , School of Computer Science and Technology, Harbin Institute of Technology, HIT, China
Henggui Zhang , School of Computer Science and Technology, Harbin Institute of Technology, HIT, China
pp. 1501-1506

Interpretable models to predict Breast Cancer (Abstract)

Pedro Ferreira , CRACS-INESC TEC, Porto, Portugal
Ines Dutra , CRACS-INESC TEC, Porto, Portugal
Rogerio Salvini , Federal University of Goiás, Brazil
Elizabeth Burnside , University of Wisconsin, Medical School, Madison, USA
pp. 1507-1511

Research on early risk predictive model and discriminative feature selection of cancer based on real-world routine physical examination data (Abstract)

Guixia Kang , Key Laboratory of Universal Wireless Communications, Ministry of Education, Beijing University of Posts and telecommunications, China
Zhuang Ni , Key Laboratory of Universal Wireless Communications, Ministry of Education, Beijing University of Posts and telecommunications, China
pp. 1512-1519

Automated human physical function measurement using constrained high dispersal network with SVM-linear (Abstract)

Dan Meng , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Guitao Cao , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Xinyu Song , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Weiting Chen , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Wenming Cao , College of Information Engineering, Shenzhen University, 518060, China
pp. 1520-1526

Improved microarray data analysis using feature selection methods with machine learning methods (Abstract)

Jing Sun , Department of Mathematics and Computer Science, Laurentian University, Sudbury, Ontario, Canada
Kalpdrum Passi , Department of Mathematics and Computer Science, Laurentian University, Sudbury, Ontario, Canada
Chakresh Kumar Jain , Department of Biotechnology, Jaypee Institute of Information Technology, Noida, India
pp. 1527-1534

A new feature selection approach for optimizing prediction models, applied to breast cancer subtype classification (Abstract)

Pham Quang Huy , Department of Mathematics and Computer Science, University of Dalat, Vietnam
Alioune Ngom , School of Computer Science, University of Windsor, N9B 3P4, Ontario, Canada
Luis Rueda , School of Computer Science, University of Windsor, N9B 3P4, Ontario, Canada
pp. 1535-1541

Layerwise feature selection in Stacked Sparse Auto-Encoder for tumor type prediction (Abstract)

Vikas Singh , Dept. of Electrical Engineering, Indian Institute of Technology Kanpur, India
Nikhil Baranwal , Dept. of Electrical Engineering, Indian Institute of Technology Kanpur, India
Rahul K. Sevakula , Dept. of Electrical Engineering, Indian Institute of Technology Kanpur, India
Nishchal K. Verma , Faculty of Electrical Engineering, Indian Institute of Technology Kanpur, India
Yan Cui , Faculty of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, USA
pp. 1542-1548

Extreme Large Margin Distribution Machine and its applications for biomedical datasets (Abstract)

Zhiyong Yang , Beijing Key Laboratory of Knowledge Engineering for Materials Science, 100083, China
Jingcheng Lu , Department of Computer, School of Computer and Communication Engineering, University of Science and Technology Beijing (USTB), 100083, China
Taohong Zhang , Beijing Key Laboratory of Knowledge Engineering for Materials Science, 100083, China
pp. 1549-1554

Analyzing and retrieving illicit drug-related posts from social media (Abstract)

Tao Ding , The Department of Information Systems, University of Maryland, Baltimore County, 21250, United States
Arpita Roy , The Department of Information Systems, University of Maryland, Baltimore County, 21250, United States
Zhiyuan Chen , The Department of Information Systems, University of Maryland, Baltimore County, 21250, United States
Qian Zhu , The Department of Information Systems, University of Maryland, Baltimore County, 21250, United States
Shimei Pan , The Department of Information Systems, University of Maryland, Baltimore County, 21250, United States
pp. 1555-1560

Multiple confounders correction with regularized linear mixed effect models, with application in biological processes (Abstract)

Haohan Wang , School of Computer Science, Carnegie Mellon University, United States
Jingkang Yang , International School, Beijing University of Posts and Telecommunications, China
pp. 1561-1568

C. elegans search behavior analysis using Multivariate Dynamic Time Warping (Abstract)

Yiyang Wang , School of Computing, College of Computing and Digital Media, DePaul University, Chicago, Illinois, United States of America
Carleton Smith , School of Computing, College of Computing and Digital Media, DePaul University, Chicago, Illinois, United States of America
Mingfei Shao , School of Computing, College of Computing and Digital Media, DePaul University, Chicago, Illinois, United States of America
Li Huang , School of Computing, College of Computing and Digital Media, DePaul University, Chicago, Illinois, United States of America
Jacob Furst , School of Computing, College of Computing and Digital Media, DePaul University, Chicago, Illinois, United States of America
Daniela Raicu , School of Computing, College of Computing and Digital Media, DePaul University, Chicago, Illinois, United States of America
Hongkyun Kim , Department of Cell Biology and Anatomy, Chicago Medical School, Rosalind Franklin University, North Chicago, Illinois, United States of America
pp. 1569-1576

DNA region grammatical inference (Abstract)

Cory Cook , Computer Science, San Jose State University, California, United States
pp. 1577-1583

An improved ensemble learning method with SMOTE for protein interaction hot spots prediction (Abstract)

Qianqian Huang , Hubei Key Laboratory of Intelligent Information Processing and Real-time Industrial System, Wuhan University of Science and Technology, China, 430065
Xiaolong Zhang , Hubei Key Laboratory of Intelligent Information Processing and Real-time Industrial System, Wuhan University of Science and Technology, China, 430065
pp. 1584-1589

Geometry based general prediction model of protein-peptide binding affinities (Abstract)

Zhonghao Liu , Department of Computer Science and Engineering, University of South Carolina, Columbia, 29208, United States
Jianjun Hu , Department of Computer Science and Engineering, University of South Carolina, Columbia, 29208, United States
pp. 1590-1597

Prediction and analysis of hot region in protein-protein interactions (Abstract)

Xiaoli Lin , Hubei Key Laboratory of Intelligent Information Processing and Real-time Industrial System, School of Computer Science and Technology, Wuhan University of Science and Technology, China, 430065
Xiaolong Zhang , Hubei Key Laboratory of Intelligent Information Processing and Real-time Industrial System, School of Computer Science and Technology, Wuhan University of Science and Technology, China, 430065
pp. 1598-1603

Cardiac left ventricular volumes prediction method based on atlas location and deep learning (Abstract)

Gongning Luo , School of Computer Science and Technology, Harbin Institute of Technology, China
Suyu Dong , School of Computer Science and Technology, Harbin Institute of Technology, China
Kuanquan Wang , School of Computer Science and Technology, Harbin Institute of Technology, China
Henggui Zhang , School of Physics and Astronomy, University of Manchester, U.K
pp. 1604-1610

A self-adapting method for RBC count from different blood smears based on PCNN and image quality (Abstract)

Rong Ma , School of Information Science and Engineering, Lanzhou University, China
Yuanzhi Liang , School of Information Science and Engineering, Lanzhou University, China
Yide Ma , School of Information Science and Engineering, Lanzhou University, China
pp. 1611-1615

A novel semantics-based approach to medical literature search (Abstract)

Chenhao Yang , University of Chinese Academy of Sciences, Beijing, China
Ben He , University of Chinese Academy of Sciences, Beijing, China
pp. 1616-1623

A fast and precise speech-triggered tongue animation system by combining parameterized model and anatomical model (Abstract)

Jun Yu , Department of Automation, University of Science and Technology of China, Hefei, China
Chen Jiang , Department of Automation, University of Science and Technology of China, Hefei, China
Zengfu Wang , Department of Automation, University of Science and Technology of China, Hefei, China
pp. 1624-1627

A novel saliency detection method via manifold ranking and compactness prior (Abstract)

Libo Zhang , University of Chinese Academy of Sciences, Beijing, China
Zakir Ullah , University of Chinese Academy of Sciences, Beijing, China
Yihan Sun , University of Chinese Academy of Sciences, Beijing, China
Tiejian Luo , University of Chinese Academy of Sciences, Beijing, China
pp. 1628-1634

Modelling enteric methane emissions from milking dairy cows with Bayesian networks (Abstract)

Huiru Zheng , School of Computing and Mathematics, Ulster University, Co. Antrim, Northern Ireland, UK
Haiying Wang , School of Computing and Mathematics, Ulster University, Co. Antrim, Northern Ireland, UK
Tianhai Yan , Agri-Food and Biosciences Institute, Hillsborough, Co. Down BT26 6DR, UK
pp. 1635-1640

DisSetSim: An online system for calculating similarity between disease sets (Abstract)

Yang Hu , School of Life Science and Technology, Harbin Institute of Technology, 150001, China
Lingling Zhao , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Zhiyan Liu , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Hong Ju , Department of information engineering, Heilongjiang biological science and technology Career Academy, Harbin 150001, China
Hongbo Shi , College of Bioinformatics Science and Technology, Harbin Medical University, 150001, China
Peigang Xu , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Yadong Wang , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Liang Cheng , College of Bioinformatics Science and Technology, Harbin Medical University, 150001, China
pp. 1641-1652

Analyzing factors involved in the HPO-based semantic similarity calculation (Abstract)

Jiajie Peng , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Qianqian Li , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Bolin Chen , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Jialu Hu , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Xuequn Shang , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
pp. 1653-1656

An automatic approach for constructing a knowledge base of symptoms in Chinese (Abstract)

Tong Ruan , East China University of Science and Technology, Shanghai, China 200237
Mengjie Wang , East China University of Science and Technology, Shanghai, China 200237
Jian Sun , East China University of Science and Technology, Shanghai, China 200237
Ting Wang , East China University of Science and Technology, Shanghai, China 200237
Lu Zeng , East China University of Science and Technology, Shanghai, China 200237
Yichao Yin , Shanghai Shuguang Hospital, China 200025
Ju Gao , Shanghai Shuguang Hospital, China 200025
pp. 1657-1662

Constructing an integrated gene similarity network for the identification of disease genes (Abstract)

Zhen Tian , Department of computer Science and Engineering, Harbin Institute of Technology, China
Maozu Guo , Department of computer Science and Engineering, Harbin Institute of Technology, China
Chunyu Wang , Department of computer Science and Engineering, Harbin Institute of Technology, China
Linlin Xing , Department of computer Science and Engineering, Harbin Institute of Technology, China
Lei Wang , Institute of Health Service and Medical Information, Academy of Military Medical Sciences, Beijing, China 100850
Yin Zhang , Institute of Health Service and Medical Information, Academy of Military Medical Sciences, Beijing, China 100850
pp. 1663-1668

Biological entity relationship extraction method based on multiple kernel learning (Abstract)

Dongliang Xu , School of Mechanical, Electrical & Information Engineering, ShanDong University, WeiHai, China
Jingchang Pan , School of Mechanical, Electrical & Information Engineering, ShanDong University, WeiHai, China
Bailing Wang , School of Computer Science and Technology, Harbin Institute of Technology, WeiHai, China
Xinyi Zou , School of Computer Science and Technology, Harbin Institute of Technology, WeiHai, China
pp. 1669-1672

Dynamic analysis of cell interactions in biological environments under multiagent social learning framework (Abstract)

Chengwei Zhang , School of Computer Science and Technology, Tianjin University, China
Xiaohong Li , School of Computer Science and Technology, Tianjin University, China
Shuxin Li , School of Computer Science and Technology, Tianjin University, China
Jianye Hao , School of Computer Software, Tianjin University, China
pp. 1673-1678

A novel method to identify pre-microRNA in various species knowledge base (Abstract)

Tianyi Zhao , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Ningyi Zhang , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Jun Ren , School of Life Science and Technology, Harbin Institute of Technology, 150001, China
Peigang Xu , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Zhiyan Liu , Department of Computer Science and Technology, Harbin Institute of Technology, 150001, China
Liang Cheng , College of Bioinformatics Science and Technology, Harbin Medical University, 150001, China
Yang Hu , School of Life Science and Technology, Harbin Institute of Technology, 150001, China
pp. 1679-1688

Revealing protein functions based on relationships of interacting proteins and GO terms (Abstract)

Zhixia Teng , Department of Information Management and Information system, Northeast Forestry University, China
Maozu Guo , Department of Computer Science and Engineering, Harbin Institute of Technology, China
Xiaoyan Liu , Department of Computer Science and Engineering, Harbin Institute of Technology, China
Zhen Tian , Department of Computer Science and Engineering, Harbin Institute of Technology, China
Kai Che , Department of Computer Science and Engineering, Harbin Institute of Technology, China
pp. 1689-1694

GLAlign: Using global graph alignment to improve local graph alignment (Abstract)

Marianna Milano , Department of Surgical and Medical Sciences, University of Catanzaro, Italy
Mario Cannataro , Department of Surgical and Medical Sciences, University of Catanzaro, Italy
Pietro Hiram Guzzi , Department of Surgical and Medical Sciences, University of Catanzaro, Italy
pp. 1695-1702

Development of a computer-aided system for an effective brain connectivity network (Abstract)

Yaoxin Nie , School of Computer Science and Technology, Beijing Institute of Technology, China
Linlin Zhu , School of Computer Science and Technology, Beijing Institute of Technology, China
Yipeng Su , School of Computer Science and Technology, Beijing Institute of Technology, China
Xudong Li , School of Computer Science and Technology, Beijing Institute of Technology, China
Zhendong Niu , School of Computer Science and Technology, Beijing Institute of Technology, China
pp. 1703-1705

Uncertainty quantified computational analysis of the energetics of virus capsid assembly (Abstract)

Nathan Clement , Department of Computer Science, The University of Texas at Austin, 78712, United States
Muhibur Rasheed , Department of Computer Science, The University of Texas at Austin, 78712, United States
Chandrajit Bajaj , Department of Computer Science, The University of Texas at Austin, 78712, United States
pp. 1706-1713

Challenges in matching secondary structures in cryo-EM: An exploration (Abstract)

Devin Haslam , Department of Computer Science, Old Dominion University, Norfolk VA23529, United States
Mohammad Zubair , Department of Computer Science, Old Dominion University, Norfolk VA23529, United States
Desh Ranjan , Department of Computer Science, Old Dominion University, Norfolk VA23529, United States
Abhishek Biswas , Oak Ridge National Laboratory, TN 37831, United States
Jing He , Department of Computer Science, Old Dominion University, Norfolk VA23529, United States
pp. 1714-1719

Non-sequential protein structure alignment based on variable length AFPs using the maximal clique (Abstract)

Xingmei Liu , School of Information Science and Engineering, Lanzhou University, Gansu 730000, China
Yonggang Lu , School of Information Science and Engineering, Lanzhou University, Gansu 730000, China
Hu Cao , School of Information Science and Engineering, Lanzhou University, Gansu 730000, China
pp. 1720-1725

An efficient method for validating protein models using electron microscopy data (Abstract)

Kamal Al Nasr , Department of Computer Science, Tennessee State University, Nashville, 37209, United States
Christopher Jones , Department of Computer Science, Tennessee State University, Nashville, 37209, United States
Bashar Aboona , Department of Computer Science, Tennessee State University, Nashville, 37209, United States
Abdulrahman Alanazi , Department of Computer Science, Tennessee State University, Nashville, 37209, United States
pp. 1726-1731

Identifying amino acids sensitive to mutations using high-throughput rigidity analysis (Abstract)

Michael Siderius , Computer Science, Western Washington University, Bellingham, 98225, United States
Filip Jagodzinski , Computer Science, Western Washington University, Bellingham, 98225, United States
pp. 1732-1738

Mining structure patterns on the protein-DNA interfaces (Abstract)

Qing Sun , Department of Computer Science, North Dakota State University, Fargo, USA
Changhui Yan , Department of Computer Science, North Dakota State University, Fargo, USA
pp. 1739-1744

Selecting near-native structures from decoys using maximal cliques (Abstract)

Jinyang Yan , School of Information Science and Engineering, Lanzhou University, 730000, China
Yonggang Lu , School of Information Science and Engineering, Lanzhou University, 730000, China
Jing He , Department of Computer Science, Old Dominion University, Norfolk, Virginia 23529-0162, USA
pp. 1745-1748

Analysis for doubly repeated omics data from crossover design (Abstract)

Sunghoon Choi , Department of Statistics, Seoul National University, Daehak-Dong, Gwanak-gu, Republic of Korea
Soo-yeon Park , Department of Nutritional Science and Food Management, Ewha Woman's University, Daehyeon-dong, Seodaemun-gu, Seoul, Republic of Korea
Hoejin Kim , Department of Nutritional Science and Food Management, Ewha Woman's University, Daehyeon-dong, Seodaemun-gu, Seoul, Republic of Korea
Oran Kwon , Department of Nutritional Science and Food Management, Ewha Woman's University, Daehyeon-dong, Seodaemun-gu, Seoul, Republic of Korea
Taesung Park , Department of Statistics, Seoul National University, Daehak-Dong, Gwanak-gu, Republic of Korea
pp. 1749-1752

Some comparisons of gene expression classifiers (Abstract)

Shinuk Kim , Dept. of Civil Engineering, Sangmyung University, Cheonan, Republic of Korea
Mark Kon , Dept. Mathematics and Statistics, Boston University, USA
Hyowon Lee , Dept. of Biotechnology, Sangmyung University, Cheonan, Republic of Korea
pp. 1753-1756

Comparisons of linkage disequilibrium blocks of different populations at the sites of natural selection (Abstract)

Sun-Ah Kim , Dpt of Mathematics Education, Seoul National University, South Korea
Suh-Ryung Kim , Dpt of Mathematics Education, Seoul National University, South Korea
Yun Joo Yoo , Dpt of Mathematics Education, Seoul National University, South Korea
pp. 1757-1762

Quality control plot for high dimensional omics data (Abstract)

Gyu-tae Kim , Department of Statistics, Seoul National University, Daehak-Dong, Gwanak-gu, 08826, Republic of Korea
Yongkang Kim , Department of Statistics, Seoul National University, Daehak-Dong, Gwanak-gu, 08826, Republic of Korea
Min-Seok Kwon , Interdisciplinary Program in Bioinformatics, Seoul National University, Daehak-Dong, Gwanak-gu, 08826, Republic of Korea
Taesung Park , Department of Statistics, Seoul National University, Daehak-Dong, Gwanak-gu, 08826, Republic of Korea
pp. 1763-1766

Detecting high-dimensional genetic associations using a Markov-Blanket in a family-based study (Abstract)

Hyo Jung Lee , Product Development HQ, DongA-ST, Seoul, KOREA
Jae Won Lee , Department of Statistics, Korea University, Seoul, KOREA
Seohoon Jin , Department of Informational Statistics, Korea University, Sejong, KOREA
Hee Jeong Yoo , Department of Neuropsychiatry, Seoul National University Bundang Hospital, KOREA
Mira Park , Department of Preventive Medicine, Eulji University, Daejeon, KOREA
pp. 1767-1770

A comparison study on multivariate methods for joint-SNVs association analysis (Abstract)

Jin-Xiong Lv , Department of Computer Science and Engineering, Shanghai Jiao Tong University, China
Han-Chen Huang , Key Laboratory of RNA Biology, Institute of biophysics, Chinese Academy of Sciences, Beijing, China
Run-Sheng Chen , Key Laboratory of RNA Biology, Institute of biophysics, Chinese Academy of Sciences, Beijing, China
Lei Xu , Department of Computer Science and Engineering, Shanghai Jiao Tong University, China
pp. 1771-1776

Combinational logic network for digitally coded gene expression of gastric cancer (Abstract)

Sungjin Park , College of Medicine, Gachon University, Incheon, 21565; Korea
Seungyoon Nam , College of Medicine, Gachon University, Incheon, 21565; Korea
pp. 1777-1782

Multivariate approach to the analysis of correlated RNA-seq data (Abstract)

Hyunjin Park , Department of Statistics, Seoul National University, Korea
Seungyeoun Lee , Department of Mathematics and Statistics, Sejong University, Korea
Ye Jin Kim , Department of Food Science and Nutrition, Kyungpook National University, Korea
Myung-Sook Choi , Department of Food Science and Nutrition, Kyungpook National University, Korea
Taesung Park , Department of Statistics, Seoul National University, Korea
pp. 1783-1786

DTSP-V: A trend-based Top Scoring Pairs method for classification of time series gene expression data (Abstract)

Kaimin Wu , Information Engineering School, Zhengzhou University, China
Xiaofei Nan , Information Engineering School, Zhengzhou University, China
Yumei Chai , Information Engineering School, Zhengzhou University, China
Liming Wang , Information Engineering School, Zhengzhou University, China
Kun Li , Information Engineering School, Zhengzhou University, China
pp. 1787-1794

A graph-Laplacian PCA based on L1/2-norm constraint for characteristic gene selection (Abstract)

Chun-Mei Feng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Ying-Lian Gao , Library of Qufu Normal University, Qufu Normal University, Rizhao, 276826 China
Juan Wang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Dong-Qin Wang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Yong Du , Department of Electrical and Information Engineering, Northeast Agricultural University, Harbin, 150030 China
pp. 1795-1799

A novel scoring estimator to screening for oncogenic chimeric transcripts in cancer transcriptome sequencing (Abstract)

Jian-lei Gu , Shanghai Institute of Medical Genetics, Shanghai Children's Hospital, Shanghai Jiao Tong University, 200040, China
Yao Lu , Shanghai Institute of Medical Genetics, Shanghai Children's Hospital, Shanghai Jiao Tong University, 200040, China
Shi-yi Liu , Shanghai Institute of Medical Genetics, Shanghai Children's Hospital, Shanghai Jiao Tong University, 200040, China
Cong Liu , Department of Bioengineering, Bioinformatics Program, University of Illinois at Chicago, 60607, USA
Hui Lu , Shanghai Institute of Medical Genetics, Shanghai Children's Hospital, Shanghai Jiao Tong University, 200040, China
pp. 1800-1805

A high-precision shallow Convolutional Neural Network based strategy for the detection of Genomic Deletions (Abstract)

Jing Wang , College of Information Science and Technology, Beijing University of Chemical Technology, China
Cheng Ling , College of Information Science and Technology, Beijing University of Chemical Technology, China
Jingyang Gao , College of Information Science and Technology, Beijing University of Chemical Technology, China
pp. 1806-1813

Detecting protein complexes from DPINs by OPTICS based on particle swarm optimization (Abstract)

Xiujuan Lei , School of Computer Science, Shaanxi Normal University, Xi'an, China
Huan Li , School of Computer Science, Shaanxi Normal University, Xi'an, China
Fang-Xiang Wu , Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, Canada
pp. 1814-1821

Sparse singular value decomposition-based feature extraction for identifying differentially expressed genes (Abstract)

Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Xiang-Zhen Kong , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Chun-Hou Zheng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Jun-Liang Shang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826, Shandong, China
Wei Zhang , Biomedical Research Institute, Shenzhen Peking University, the Hongkong University of Science and Technology Medical Center, 518036, Guangdong, China
pp. 1822-1827

Characteristic gene selection via L2,1-norm Sparse Principal Component Analysis (Abstract)

Yao Lu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Ying-Lian Gao , Library of Qufu Normal University, Qufu Normal University, Rizhao, 276826 China
Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Chang-Gang Wen , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Ya-Xuan Wang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Jiguo Yu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
pp. 1828-1833

A disease module detection algorithm for lung adenocarcinoma tumor network with significance of connections and network controllability methodology (Abstract)

Gui-Min Qin , School of Software, Xidian University, Xi'an, China
Yi-Bo Hou , School of Computer Science and Technology, Xidian University, Xi'an, China
Bao-Guo Yu , State Key Laboratory of Satellite Navigation System and Equipment Technology, The 54th Research Institute of China, Electronics Technology Group Corporation, Shi Jia Zhuang, China
Xi-Yang Liu , School of Software, Xidian University, Xi'an, China
pp. 1834-1840

Detecting coordinated regulations of pathways by higher logic analysis (Abstract)

Yansen Su , Key Lab of Intelligent Computing and Signal Processing of Ministry of Education, School of Computer Science and Technology, Anhui University, Hefei 230601, China
Xingyi Zhang , Key Lab of Intelligent Computing and Signal Processing of Ministry of Education, School of Computer Science and Technology, Anhui University, Hefei 230601, China
Linqiang Pan , Key Laboratory of Image Processing and Intelligent Control, School of Automation, Huazhong University of Science and Technology, Wuhan 430074, China
pp. 1841-1847

Toward optimization-oriented NGS peak alignment within the context of Precision Medicine Initiative (Abstract)

Binhua Tang , Epigenetics & Function Group, School of Internet of Things, Hohai University, Jiangsu 213022, China
pp. 1848-1850

Differentially expressed genes selection via Truncated Nuclear Norm Regularization (Abstract)

Ya-Xuan Wang , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Jin-Xing Liu , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Ying-Lian Gao , Library of Qufu Normal University, Qufu Normal University, Rizhao, 276826 China
Xiang-Zhen Kong , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Chun-Hou Zheng , School of Information Science and Engineering, Qufu Normal University, Rizhao, 276826 China
Yong Du , Department of Electrical and Information Engineering, Northeast Agricultural University, Harbin, 150030 China
pp. 1851-1855

Dynamic evolutions of HIV infection on treatment with combinatorial drugs (Abstract)

Xiaojing Lu , Department of Mathematics, Shanghai University, China
Yanwei Liu , College of Mathematics and Information Science, Zhengzhou University of Light Industry, China
Jianfeng Jiao , Department of Mathematics, Shanghai University, China
Riqi Wang , Department of Mathematics, Shanghai University, China
pp. 1856-1863

Network based study for the anti-rheumatic mechanism of Tibetan medicated-bath therapy (Abstract)

Jian Yang , Department of Mathematics, Logistical Engineering University, Chongqing, China
Tianhong Wang , School of National Medicine, Chengdu University of TCM, China
Xiaona Shen , Department of Mathematics, Logistical Engineering University, Chongqing, China
Xing Chen , Department of Mathematics, Logistical Engineering University, Chongqing, China
Kehui Zhao , School of National Medicine, Chengdu University of TCM, China
Jing Wang , School of National Medicine, Chengdu University of TCM, China
Yi Zhang , School of National Medicine, Chengdu University of TCM, China
Jing Zhao , Department of Mathematics, Logistical Engineering University, Chongqing, China
Yang Ga , Tibetan Traditional Medical College, Lhasa, China
pp. 1864-1868

Protein expression data improves gene function prediction (Abstract)

Huadong Yang , Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, 210016, China
Xiaofeng Song , Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, 210016, China
Xuejiang Guo , State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, 210029, China
pp. 1869-1870

More accurate models for detecting gene-gene interactions from public expression compendia (Abstract)

Lu Zhang , Department of Computer Science, City University of Hong Kong, China
Jia Xing Chen , Department of Computer Science, City University of Hong Kong, China
ShuaiCheng Li , Department of Computer Science, City University of Hong Kong, China
pp. 1871-1878

The exploration of functional divergence between human and macaque brains based on gene networks (Abstract)

Peipei Xiao , Department of Computer Science, Tongji University, Shanghai 201804, China
Xing-Ming Zhao , Department of Computer Science, Tongji University, Shanghai 201804, China
pp. 1879-1884

Developing a robust colorectal cancer (CRC) risk predictive model with the big genetic and environment related CRC data (Abstract)

Chunqiu Zheng , College of Computer and Information Science, Southwest University, Chongqing, 400715, China
Lei Xing , School of Electronic and Information Engineering, Xi'an Jiaotong University, 28 Xianning West Road, Beilin District, 710049, China
Tian Li , College of Computer and Information Science, Southwest University, Chongqing, 400715, China
Tingting Li , College of Mathematics and Statistics, Southwest University, Chongqing, 400715, China
Huan Yang , Department of Environment Health, College of Preventive Medicine, Third Military Medical University, 30 GaoTanyan Street, Shapingba District, Chongqing 400038, China
Jia Cao , Department of Environment Health, College of Preventive Medicine, Third Military Medical University, 30 GaoTanyan Street, Shapingba District, Chongqing 400038, China
Badong Chen , School of Electronic and Information Engineering, Xi'an Jiaotong University, 28 Xianning West Road, Beilin District, 710049, China
Ziyuan Zhou , Department of Environment Health, College of Preventive Medicine, Third Military Medical University, 30 GaoTanyan Street, Shapingba District, Chongqing 400038, China
Le Zhang , College of Computer and Information Science, Southwest University, Chongqing, 400715, China
pp. 1885-1893

A lossless FASTQ Quality Scores file compression algorithm based on linear combination prediction (Abstract)

Jiabing Fu , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
Yacong Ma , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
Shoubin Dong , Guangdong Key Laboratory of Communications, School of Computer Science & Engineering, South China University of Technology, Wushan Road 381, Guangzhou, CHINA
pp. 1894-1896

Template-based prediction of RNA tertiary structure (Abstract)

Rastislav Galvanek , Faculty of Mathematics and Physics, Charles University, Prague, Czech Republic
David Hoksza , Faculty of Mathematics and Physics, Charles University, Prague, Czech Republic
Josef Panek , Institute of Microbiology, Academy of Sciences of the Czech Republic, Prague, Czech Republic
pp. 1897-1900

Enhancing protein homology batch search algorithm with sequence compression and clustering (Abstract)

Hongwei Ge , College of Computer Science and Technology, Dalian University of Technology, 116023, China
Liang Sun , College of Computer Science and Technology, Dalian University of Technology, 116023, China
Jinghong Yu , College of Computer Science and Technology, Dalian University of Technology, 116023, China
pp. 1901-1903

A joint model for question-answering over Traditional Chinese Medicine (Abstract)

Xiangzhou Huang , Zhejiang University, Hangzhou, China
Yin Zhang , Zhejiang University, Hangzhou, China
Baogang Wei , Zhejiang University, Hangzhou, China
Liang Yao , Zhejiang University, Hangzhou, China
pp. 1904-1906

Differential Co-Expression Networks using RNA-seq and microarrays in Alzheimer's disease (Abstract)

Hyojin Kang , Department of Convergence Technology Research, Korea Institute of Science and Technology Information (KISTI), Daejeon, Korea
Junehawk Lee , Department of Convergence Technology Research, Korea Institute of Science and Technology Information (KISTI), Daejeon, Korea
Seokjong Yu , Department of Convergence Technology Research, Korea Institute of Science and Technology Information (KISTI), Daejeon, Korea
pp. 1907-1908

A clustering approach for denovo assembly using Next Generation Sequencing data (Abstract)

Mehdi Kchouk , Faculty of Sciences of Tunis (FST), Tunis El-Manar University, Tunisia
Mourad Elloumi , Laboratory of Technologies of Information and Communication and Electrical Engineering, National Superior School of Engineers of Tunis, University of Tunis, Tunisia
pp. 1909-1911

Multi-lead medical waveform format encoding rules and its application in a wearable watch (Abstract)

ZhiWei Liang , Dongguan & Guangzhou University of Chinese Medicine, Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Dongguan, Guangdong, China
LiYi Shi , Dongguan & Guangzhou University of Chinese Medicine, Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Dongguan, Guangdong, China
Hao Tian , Dongguan & Guangzhou University of Chinese Medicine, Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Dongguan, Guangdong, China
GuoQing Xie , Dongguan & Guangzhou University of Chinese Medicine, Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Dongguan, Guangdong, China
QianRong Liang , Guangzhou University of Chinese Medicine, Guangdong, China
XiPeng Yu , Guangzhou University of Chinese Medicine, Guangdong, China
XiaoPing Lai , Guangzhou University of Chinese Medicine, Guangdong, China
Ye Yuan , Yanhuang Oriental (Beijing)Co., Ltd. of Health Science and Technology, China
Bin Feng , WASE Bio-Medical Electronics Co., Ltd, Dongguan, Guangdong, China
pp. 1912-1914

Facial expression recognition based on LLENet (Abstract)

Dan Meng , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Guitao Cao , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Zhihai He , Department of Electrical and Computer Engineering, University of Missouri, Columbia, USA 65211
Wenming Cao , College of Information Engineering, Shenzhen University, China 518060
pp. 1915-1917

A deep tongue image features analysis model for medical application (Abstract)

Dan Meng , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Guitao Cao , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Ye Duan , Department of Computer Science, University of Missouri, Columbia, USA 65211
Minghua Zhu , School of Computer Scinence and Software Engineering, East China Normal University, Shanghai, China 200062
Liping Tu , Department of Computer Science, University of Missouri, Columbia, USA 65211
Jiatuo Xu , Department of TCM Information and Technology Center, Shanghai University of TCM, China
Dong Xu , Department of Computer Science, University of Missouri, Columbia, USA 65211
pp. 1918-1922

Efficacy of modified BuYangHuanWu decoction on post-stroke fatigue (Abstract)

Ruihuan Pan , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Jie Zhan , Department of Neurology, Foshan Hospital of Traditional Chinese Medicine, Guangzhou University of Chinese Medicine, 528000, China
Lechang Zhan , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Youhua Guo , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Hongxia Chen , Department of Rehabilitation, Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
pp. 1923-1925

Traditional Chinese medicine clinical records classification using knowledge-powered document embedding (Abstract)

Liang Yao , College of Computer Science and Technology, Zhejiang University, 310027 Hangzhou, China
Yin Zhang , College of Computer Science and Technology, Zhejiang University, 310027 Hangzhou, China
Baogang Wei , College of Computer Science and Technology, Zhejiang University, 310027 Hangzhou, China
Zherong Li , College of Computer Science and Technology, Zhejiang University, 310027 Hangzhou, China
Xiangzhou Huang , College of Computer Science and Technology, Zhejiang University, 310027 Hangzhou, China
pp. 1926-1928

Enlarging drug dictionary with semi-supervised learning for Drug Entity Recognition (Abstract)

Donghuo Zeng , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Chengjie Sun , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Lei Lin , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
Bingquan Liu , School of Computer Science and Technology, Harbin Institute of Technology, China 150001
pp. 1929-1931

A fast filter tracker against serious occlusion (Abstract)

Libo Zhang , University of Chinese Academy of Sciences, Beijing, China
Tiejian Luo , University of Chinese Academy of Sciences, Beijing, China
Yihan Sun , University of Chinese Academy of Sciences, Beijing, China
Lin Yang , University of Chinese Academy of Sciences, Beijing, China
pp. 1932-1935

Semantic analysis based on human thought pattern (Abstract)

Libo Zhang , University of Chinese Academy of Sciences, Beijing, China
Tiejian Luo , University of Chinese Academy of Sciences, Beijing, China
Yihan Sun , University of Chinese Academy of Sciences, Beijing, China
Lin Yang , University of Chinese Academy of Sciences, Beijing, China
pp. 1936-1939

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