The Community for Technology Leaders
2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (2015)
Washington, DC, USA
Nov. 9, 2015 to Nov. 12, 2015
ISBN: 978-1-4673-6798-1
TABLE OF CONTENTS

Cover page (PDF)

pp. c1

Preface (PDF)

Bin Ma , University of Waterloo, Canada
Sanguthevar Rajasekaran , University of Connecticut, USA
Jun Huan , University of Kansas, USA
Satoru Miyano , University of Tokyo, Japan
Amarda Shehu , George Mason University, USA
Vijay K. Gombar , Lilly Corporate Center, USA
Matthieu Schapranow , Hasso Plattner Institute, Germany
Illhoi Yoo , University of Missouri at Columbia, USA
Jiayu Zhou , Samsung, USA
Xiaohua Tony Hu , Drexel University, USA
pp. 1-2

Organization (PDF)

pp. 1-3

Big data in biomedicine ? An NIH perspective (PDF)

Philip E. Bourne , National Institutes of Health, United States of America
pp. 1

Computational challenges in microbiome research (PDF)

Mihai Pop , Department of Computer Science and the Center for Bioinformatics and Computational Biology, University of Maryland, College Park (UMCP), United States of America
pp. 2

Parallel machine learning approaches for reverse engineering genome-scale networks (PDF)

Srinivas Aluru , School of Computational Science and Engineering, Georgia Institute of Technology, United States of America
pp. 3

Toward personalized pan-omic association analysis under complex structures and big data (PDF)

Eric Xing , School of Computer Science, Carnegie Mellon University, United States of America
pp. 4

Computational Synteny Block: A framework to identify evolutionary events (Abstract)

Jose A. Arjona-Medina , Advanced Computing Technologies Unit, RISC Software GmbH, Hagenberg, Upper Austria 4232
Oswaldo Trelles , Department of Computer Architecture, University of Malaga, Campus de Teatinos, 29071, Spain
pp. 5-12

Evolutionary search strategies for efficient sample-based representations of multiple-basin protein energy landscapes (Abstract)

Emmanuel Sapin , Department of Computer Science, George Mason University, Fairfax, VA, 22030, United States
Kenneth A De Jong , Department of Computer Science, George Mason University, Fairfax, VA, 22030, United States
Amarda Shehu , Department of Computer Science, George Mason University, Fairfax, VA, 22030, United States
pp. 13-20

Structure-guided selection of Specificity Determining Positions in the human kinome (Abstract)

Mark Moll , Department of Computer Science, Rice University, Houston, TX, USA
Paul W. Finn , University of Buckingham, United Kingdom
Lydia E. Kavraki , Department of Computer Science, Rice University, Houston, TX, USA
pp. 21-28

Boosting compound-protein interaction prediction by deep learning (Abstract)

Kai Tian , Shanghai Key Lab of Intelligent Information Processing, School of Computer Science, Fudan University, 200433, China
Mingyu Shao , Shanghai Key Lab of Intelligent Information Processing, School of Computer Science, Fudan University, 200433, China
Shuigeng Zhou , Shanghai Key Lab of Intelligent Information Processing, School of Computer Science, Fudan University, 200433, China
Jihong Guan , Department of Computer Science and Technology, Tongji University, Shanghai 201804, China
pp. 29-34

Computing transition paths in multiple-basin proteins with a probabilistic roadmap algorithm guided by structure data (Abstract)

Tatiana Maximova , Department of Computer Science, George Mason University, United States of America
Erion Plaku , Department of Computer Science, The Catholic University of America, United States of America
Amarda Shehu , Department of Computer Science, George Mason University, United States of America
pp. 35-42

A module tree of Wnt signal transduction pathways (Abstract)

Losiana Nayak , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
Nitai P. Bhattacharyya , Biomedical Genomics Centre, 5 Suburban Hospital Road, Kolkata, India
Rajat K. De , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
pp. 43-48

A novel dimensionality reduction algorithm based on Laplace matrix for microbiome data analysis (Abstract)

Yetian Fan , School of Mathematical Sciences, Dalian University of Technology, China 116023
Xingpeng Jiang , School of Computer Science, Central China Normal University, Wuhan, China 430079
Xiaohua Hu , College of Computing and Informatics, Drexel University, Philadelphia, PA, USA 19104
Bo Song , College of Computing and Informatics, Drexel University, Philadelphia, PA, USA 19104
Yuan Ling , College of Computing and Informatics, Drexel University, Philadelphia, PA, USA 19104
Wei Wu , School of Mathematical Sciences, Dalian University of Technology, China 116023
pp. 49-54

Predicting Protein-protein interaction using co-occurring Aligned Pattern Clusters (Abstract)

Antonio Sze-To , Systems Design Engineering, University of Waterloo, Canada
Sanderz Fung , Systems Design Engineering, University of Waterloo, Canada
En-Shiun Annie Lee , Systems Design Engineering, University of Waterloo, Canada
Andrew K. C. Wong , Systems Design Engineering, University of Waterloo, Canada
pp. 55-60

Adaptive local learning in sampling based motion planning for protein folding (Abstract)

Chinwe Ekenna , Department of Computer Science and Engineering, Texas A&M University, College Station, 77843, USA
Shawna Thomas , Department of Computer Science and Engineering, Texas A&M University, College Station, 77843, USA
Nancy M. Amato , Department of Computer Science and Engineering, Texas A&M University, College Station, 77843, USA
pp. 61-68

A new algorithm for ?the LCS problem? with application in compressing genome resequencing data (Abstract)

Richard Beal , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, US
Tazin Afrin , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, US
Aliya Farheen , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, US
Don Adjeroh , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, US
pp. 69-74

Superposition of protein structures using electrostatic isopotentials (Abstract)

Ziyi Guo , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
Katya Scheinberg , Dept. of Industrial and Systems Engineering, Lehigh University, Bethlehem, PA, USA
Juliana Hong , Cornell University, Ithaca, NY, USA
Brian Y. Chen , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
pp. 75-82

SNVSniffer: An integrated caller for germline and somatic SNVs based on Bayesian models (Abstract)

Yongchao Liu , School of Computational Science & Engineering, Georgia Institute of Technology, Atlanta, 30332, USA
Martin Loewer , Translational Oncology, Johannes Gutenberg University Medical Center gGmbH Mainz, 55131, Germany
Srinivas Aluru , School of Computational Science & Engineering, Georgia Institute of Technology, Atlanta, 30332, USA
Bertil Schmidt , Institute of Computer Science, Johannes Gutenberg University Mainz, 55128, Germany
pp. 83-90

Protein model quality assessment by learning-to-rank (Abstract)

Xiaoyang Jing , School of Computer Science, Fudan University, Shanghai 200433, China
Qiwen Dong , School of Computer Science, Fudan University, Shanghai 200433, China
Xuan Liu , College of Engineering, Shanghai Ocean University, 201303, China
Bin Liu , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Guangdong, 518055, China
pp. 91-96

MALBACsim: A Multiple Annealing and Looping Based Amplification Cycles simulator (Abstract)

Tengpeng Li , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Changsheng Zhang , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Bo Xu , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Hongmin Cai , School of Computer Science & Engineering, South China University of Technology, Guangzhou, China
Fuqiang Li , Beijing Genomics Institute, Shenzhen, China
pp. 97-100

Short read error correction using an FM-index (Abstract)

Seth Greenstein , Department of Computer Science, University of North Carolina at Chapel Hill, 27599, USA
James Holt , Department of Computer Science, University of North Carolina at Chapel Hill, 27599, USA
Leonard McMillan , Department of Computer Science, University of North Carolina at Chapel Hill, 27599, USA
pp. 101-104

HapColor: A graph coloring framework for polyploidy phasing (Abstract)

Sepideh Mazrouee , University of California Los Angeles, Computer Science Department, 3551 Boelter Hall, 90095-1596, United States of America
Wei Wang , University of California Los Angeles, Computer Science Department, 3551 Boelter Hall, 90095-1596, United States of America
pp. 105-108

Detecting temporal protein complexes based on Neighbor Closeness and time course protein interaction networks (Abstract)

Xianjun Shen , School of Computer, Central China Normal University, Wuhan, China
Yi Li , School of Computer, Central China Normal University, Wuhan, China
Xingpeng Jiang , School of Computer, Central China Normal University, Wuhan, China
Yanli Zhao , School of Computer, Central China Normal University, Wuhan, China
Tingting He , School of Computer, Central China Normal University, Wuhan, China
Jincai Yang , School of Computer, Central China Normal University, Wuhan, China
pp. 109-112

Accurate simulation of large collections of phylogenetic trees (Abstract)

Suzanne J. Matthews , Department of Electrical Engineering & Computer Science, United States Military Academy, West Point, NY, 10996, United States of America
pp. 113-118

Time series analysis of microbiome data regularized by local linear manifold (Abstract)

Xingpeng Jiang , School of Computer Science, Central China Normal University, Wuhan, Hubei, 430079, China
Xiaohua Hu , School of Computer Science, Central China Normal University, Wuhan, Hubei, 430079, China
Tingting He , School of Computer Science, Central China Normal University, Wuhan, Hubei, 430079, China
pp. 119-122

Does encoding matter? A novel view on the quantitative genetic trait prediction problem (Abstract)

Dan He , IBM T.J. Watson Research, Yorktown Heights, NY, United States of America
Laxmi Parida , IBM T.J. Watson Research, Yorktown Heights, NY, United States of America
pp. 123-126

Fast alignment filtering of nanopore sequencing reads using locality-sensitive hashing (Abstract)

Jeremy R. Wang , Department of Genetics, University of North Carolina at Chapel Hill, 27599, United States of America
Corbin D. Jones , Department of Biology, Carolina Center for Genome Science, University of North Carolina at Chapel Hill, 27599, United States of America
pp. 127-130

Quantifying feed efficiency of dairy cattle for genome-wide association analysis (Abstract)

Tingyang Xu , Department of Computer Science and Engineering, University of Connecticut, Storrs, USA
Jiangwen Sun , Department of Computer Science and Engineering, University of Connecticut, Storrs, USA
Erin E Connor , Animal Genomics and Improvement Laboratory, USDA, Agricultural Research Service, Beltsville, MD, USA
Jinbo Bi , Department of Computer Science and Engineering, University of Connecticut, Storrs, USA
pp. 131-134

RF-Phos: Random forest-based prediction of phosphorylation sites (Abstract)

Ahoi Jones , Department of Electrical and Computer Engineering, North Carolina Agricultural and Technical State University, Greensboro, 27411, United States of America
Hamid Ismail , Department of Computational Science and Engineering, North Carolina Agricultural and Technical State University, Greensboro, 27411, United States of America
Jung H. Kim , Department of Computational Science and Engineering, North Carolina Agricultural and Technical State University, Greensboro, 27411, United States of America
Robert Newman , Department of Biology, North Carolina Agricultural and Technical State University, Greensboro, 27411, United States of America
B KC Dukka , Department of Computational Science and Engineering, North Carolina Agricultural and Technical State University, Greensboro, 27411, United States of America
pp. 135-140

Imputation of ChIP-seq datasets via Low Rank Convex Co-Embedding (Abstract)

Lin Zhu , College of Electronics and Information Engineering, Tongji University, Shanghai, China
Wei-Li Guo , College of Electronics and Information Engineering, Tongji University, Shanghai, China
De-Shuang Huang , College of Electronics and Information Engineering, Tongji University, Shanghai, China
Can-Yi Lu , Department of Electrical and Computer Engineering, National University of Singapore, Singapore
pp. 141-144

Integrative approach for inference of gene regulatory networks using lasso-based random featuring and application to Psychiatric disorders (Abstract)

Dong-Chul Kim , Department of Computer Science, University of Texas Rio Grande Valley, Edinburg, 78541, United States of America
Mingon Kang , Department of Computer Science, Texas A&M University-Commerce, TX 75428, United States of America
Ashis Biswas , Department of Computer Science and Engineering, University of Texas Arlington, 76019, United States of America
Chunyu Liu , Department of Psychiatry, University of Illinois at Chicago, 60607, United States of America
Jean Gao , Department of Computer Science and Engineering, University of Texas Arlington, 76019, United States of America
pp. 145-150

A novel two-stage method for identifying microRNA-gene regulatory modules in breast cancer (Abstract)

Wenwen Min , School of Computer, Wuhan University, 430072, China
Juan Liu , School of Computer, Wuhan University, 430072, China
Fei Luo , School of Computer, Wuhan University, 430072, China
Shihua Zhang , National Center for Mathematics and Interdisciplinary Sciences, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100190, China
pp. 151-156

Construction of signaling networks with incomplete RNAi data (Abstract)

Qiyao Wang , Department of Computer & Information Science & Engineering, University of Florida, Gainesville, 32611, USA
Yuanfang Ren , Department of Computer & Information Science & Engineering, University of Florida, Gainesville, 32611, USA
Md Mahmudul Hasan , Department of Computer & Information Science & Engineering, University of Florida, Gainesville, 32611, USA
Ahmet Ay , Departments of Biology & Mathematics, Colgate University, Hamilton, NY 13346, USA
Tamer Kahveci , Department of Computer & Information Science & Engineering, University of Florida, Gainesville, 32611, USA
pp. 157-162

Reconstructing directed gene regulatory network by only gene expression data (Abstract)

Lu Zhang , Department of Computer Science, City University of Hong Kong, China
Yen Kaow Ng , Department of Computer Science, Faculty of Information and Communication Technology, Universiti Tunku Abdul Rahman, Malaysia
ShuaiCheng Li , Department of Computer Science, City University of Hong Kong, China
pp. 163-170

Analyzing differential regulatory networks modulated by continuous-state genomic features in glioblastoma multiforme (Abstract)

Yu-Chiao Chiu , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
Kai-Wen Liang , Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan
Tzu-Hung Hsiao , Department of Medical Research, Taichung Veterans General Hospital, Taiwan
Yidong Chen , Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, United States of America
Eric Y. Chuang , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
pp. 171-176

EpiTracer - an algorithm for identifying epicenters in condition-specific biological networks (Abstract)

Narmada Sambaturu , IISc Mathematics Initiative, Indian Institute of Science, Bangalore-560012, India
Madhulika Mishra , Department of Biochemistry, Indian Institute of Science, Bangalore-560012, India
Nagasuma Chandra , IISc Mathematics Initiative, Department of Biochemistry, Indian Institute of Science, Bangalore-560012, India
pp. 177-182

Predicting microRNA-disease associations by integrating multiple biological information (Abstract)

Wei Lan , School of Information Science and Engineering, Central South University, Changsha, Human, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, Human, China
Min Li , School of Information Science and Engineering, Central South University, Changsha, Human, China
Jin Liu , School of Information Science and Engineering, Central South University, Changsha, Human, China
Yi Pan , Department of Computer Science, Georgia State University, Atlanta, 30303, USA
pp. 183-188

Identification of phenotypic networks based on whole transcriptome by comparative network decomposition (Abstract)

Chuanchao Zhang , School of Computer, Wuhan University, China
Juan Liu , School of Computer, Wuhan University, China
Qianqian Shi , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
Tao Zeng , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
Luonan Chen , Key Laboratory of Systems Biology, Innovation Center for Cell Signaling Network, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, China
pp. 189-194

A two-step logistic regression algorithm for identifying individual-cancer-related genes (Abstract)

Bolin Chen , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Xuequn Shang , School of Computer Science, Northwestern Polytechnical University, Xi'an, China
Min Li , School of Information Science and Engineering, Central South University, Changsha, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, China
Fang-Xiang Wu , School of Mathematical Sciences, Nankai University, Tianjin, 300071, China
pp. 195-200

Protein-protein interaction network inference from multiple kernels with optimization based on random walk by linear programming (Abstract)

Lei Huang , Department of Computer and Information Sciences, University of Delaware, Newark, 19716, United States of America
Li Liao , Department of Computer and Information Sciences, University of Delaware, Newark, 19716, United States of America
Cathy H. Wu , Center for Bioinformatics and Computational Biology, University of Delaware, Newark, 19711, United States of America
pp. 201-207

Triple imputation for microarray missing value estimation (Abstract)

Chong He , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Hui-Hui Li , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Changbo Zhao , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Guo-Zheng Li , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
Wei Zhang , Department of Control Science and Engineering, Tongji University, Shanghai 201804, China
pp. 208-213

Model-based and context-specific background correction and differential methylation testing for MBDCap-seq (Abstract)

Yuanhang Liu , Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, United States of America
Desiree Wilson , Department of Cellular and Structure Biology, University of Texas Health Science Center at San Antonio, United States of America
Robin J. Leach , Department of Cellular and Structure Biology, University of Texas Health Science Center at San Antonio, United States of America
Yidong Chen , Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, United States of America
pp. 214-219

GREAT: GRaphlet Edge-based network AlignmenT (Abstract)

Joseph Crawford , Department of Computer Science and Engineering, Interdisciplinary Center for Network Science and Applications, and ECK Institute for Global Health, University of Notre Dame, United States of America
Tijana Milenkovic , Department of Computer Science and Engineering, Interdisciplinary Center for Network Science and Applications, and ECK Institute for Global Health, University of Notre Dame, United States of America
pp. 220-227

Purification of LC/GC-MS based biomolecular expression profiles using a topic model (Abstract)

Minkun Wang , Department of Electrical and Computer Engineering, Virginia Tech, Arlington, USA
Tsung-Heng Tsai , Department of Oncology, Georgetown University Medical Center, Washington, DC, USA
Guoqiang Yu , Department of Electrical and Computer Engineering, Virginia Tech, Arlington, USA
Habtom W. Ressom , Department of Oncology, Georgetown University Medical Center, Washington, DC, USA
pp. 228-233

petal: A novel co-expression network modeling system (Abstract)

Juli Petereit , University of Nevada, Reno, USA
Frederick C. Harris , University of Nevada, Reno, USA
Karen Schlauch , University of Nevada, Reno, USA
pp. 234-241

Interpretable deep neural networks for enhancer prediction (Abstract)

Seong Gon Kim , Department of Computer Science, Purdue University, West Lafayette, IN USA
Nawanol Theera-Ampornpunt , Department of Computer Science, Purdue University, West Lafayette, IN USA
Ananth Grama , Department of Computer Science, Purdue University, West Lafayette, IN USA
Somali Chaterji , Department of Computer Science, Purdue University, West Lafayette, IN USA
pp. 242-249

DiscMLA: AUC-based discriminative motif learning (Abstract)

Hongbo Zhang , College of Electronics and Information Engineering, Tongji University, Shanghai, China
Lin Zhu , College of Electronics and Information Engineering, Tongji University, Shanghai, China
Deshuang Huang , College of Electronics and Information Engineering, Tongji University, Shanghai, China
pp. 250-255

Principle Angle Enrichment Analysis (PAEA): Dimensionally reduced multivariate gene set enrichment analysis tool (Abstract)

Neil R. Clark , Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai School, One Gustave L. Levy Place, New York, 10029, USA
Maciej Szymkiewicz , Warsaw School of Information Technology under the auspices of the Polish Academy of Sciences, 6 Newelska St., 01-447, Poland
Zichen Wang , Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai School, One Gustave L. Levy Place, New York, 10029, USA
Caroline D. Monteiro , Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai School, One Gustave L. Levy Place, New York, 10029, USA
Matthew R. Jones , Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai School, One Gustave L. Levy Place, New York, 10029, USA
Avi Ma'ayan , Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai School, One Gustave L. Levy Place, New York, 10029, USA
pp. 256-262

On observability of attractors in Boolean Networks (Abstract)

Yushan Qiu , Division of Hematology, Robert H. Lurie Comprehensive Cancer Center, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611, USA
Xiaoqing Cheng , AMAC Labtory, Department of Mathematics, The University of Hong Kong, Hong Kong
Wai-Ki Ching , AMAC Labtory, Department of Mathematics, The University of Hong Kong, Hong Kong
Hao Jiang , Department of Mathematics, Renming University of China, China
Tatsuya Akutsu , Bioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, 611-0011, Japan
pp. 263-266

Hausdorff distance and global silhouette index as novel measures for estimating quality of biclusters (Abstract)

Nishchal K. Verma , Dept. of Electrical Engineering, IIT Kanpur, India
Esha Dutta , Dept. of ETCE, Jadavpur University, Kolkata, India
Yan Cui , Dept. of Microbiology, Immunology and Biochemistry, University of Tennessee, USA
pp. 267-272

Integrated study to infer dynamic protein-gene interactions in human p53 regulatory networks (Abstract)

Junbai Wang , Department of Pathology, Oslo University Hospital - Norwegian Radium Hospital, Montebello, 0310, Norway
Qianqian Wu , School of Mathematical Sciences, Monash University, Melbourne 3800 Victoria, Australia
Tianhai Tian , School of Mathematical Sciences, Monash University, Melbourne 3800 Victoria, Australia
pp. 273-276

An efficient method to identify essential proteins for different species by integrating protein subcellular localization information (Abstract)

Xiaoqing Peng , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
Jianxin Wang , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
Jiancheng Zhong , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
Junwei Luo , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
Yi Pan , School of Information Science and Engineering, Central South University, Changsha, Hunan, 410083, China
pp. 277-280

Exhaustive analysis of dynamical properties of Biological Regulatory Networks with Answer Set Programming (Abstract)

Emna Ben Abdallah , LUNAM Université, École Centrale de Nantes, IRCCyN UMR CNRS 6597, (Institut de Recherche en Communications et Cybernétique de Nantes), 1 rue de la Noë, 44321, France
Maxime Folschette , School of Electrical Engineering and Computer Science, University of Kassel, Germany
Olivier Roux , LUNAM Université, École Centrale de Nantes, IRCCyN UMR CNRS 6597, (Institut de Recherche en Communications et Cybernétique de Nantes), 1 rue de la Noë, 44321, France
Morgan Magnin , LUNAM Université, École Centrale de Nantes, IRCCyN UMR CNRS 6597, (Institut de Recherche en Communications et Cybernétique de Nantes), 1 rue de la Noë, 44321, France
pp. 281-285

An efficient ACS algorithm for classification-based peptide identification (Abstract)

Xijun Liang , College of Science, China University of Petroleum, Qingdao, China 266555
Zhonghang Xia , Department of Computer Science, Western Kentucky University, Bowling Green, 42101, United States of America
Ling Jian , College of Science, China University of Petroleum, Qingdao, China 266555
Xinnan Niu , Dept. of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN 37232, United States of America
Andrew Link , Dept. of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN 37232, United States of America
pp. 286-289

Joint inference of tissue-specific networks with a scale free topology (Abstract)

Somaye Hashemifar , Toyota Technological Institute at Chicago, IL 60637, United States of America
Behnam Neyshabur , Toyota Technological Institute at Chicago, IL 60637, United States of America
Jinbo Xu , Toyota Technological Institute at Chicago, IL 60637, United States of America
pp. 290-294

Human absorbable microRNA prediction based on an ensemble manifold ranking model (Abstract)

Jiang Shu , Department of Computer Science and Engineering, University of Nebraska-Lincoln, United States
Kevin Chiang , Department of Computer Science and Engineering, University of Nebraska-Lincoln, United States
Dongyu Zhao , Department of Computer Science and Engineering, University of Nebraska-Lincoln, United States
Juan Cui , Department of Computer Science and Engineering, University of Nebraska-Lincoln, United States
pp. 295-300

Guilt-by association approach to identify novel human aging-related genes using protein domains (Abstract)

Jasjit K Banwait , College of Information Science and Technology, University of Nebraska at Omaha, USA
Schuyler P Dougherty , College of Information Science and Technology, University of Nebraska at Omaha, USA
Ishwor Thapa , College of Information Science and Technology, University of Nebraska at Omaha, USA
Dhundy K Bastola , College of Information Science and Technology, University of Nebraska at Omaha, USA
pp. 301-304

A test for detecting differentially methylated regions (Abstract)

Iksoo Huh , Department of statistics, Seoul National University, South Korea
Soojin V. Yi , School of Biology, Georgia Institute of Technology, Atlanta, USA
Taesung Park , Department of statistics, Seoul National University, South Korea
pp. 305-308

RREV: Reconfigurable Rendering Engine for visualization of clinically annotated polysomnograms (Abstract)

Catherine P. Jayapandian , Case Western Reserve University, Cleveland, OH, United States of America
Wei Wang , Case Western Reserve University, Cleveland, OH, United States of America
Michael G. Morrical , Brigham and Women's Hospital, Boston, MA, United States of America
Dennis A. Dean , Brigham and Women's Hospital, Boston, MA, United States of America
Shiqiang Tao , University of Kentucky, Lexington, United States of America
Daniel R. Mobley , Brigham and Women's Hospital, Boston, MA, United States of America
Mathew Kim , Brigham and Women's Hospital, Boston, MA, United States of America
Michael Rueschman , Brigham and Women's Hospital, Boston, MA, United States of America
Kenneth A. Loparo , Case Western Reserve University, Cleveland, OH, United States of America
Susan Redline , Brigham and Women's Hospital, Boston, MA, United States of America
Guo-Qiang Zhang , University of Kentucky, Lexington, United States of America
pp. 309-316

Spatio-temporal diffusion-based dynamic cell segmentation (Abstract)

Fatima Boukari , Department of Mathematical Sciences, Delaware State University, Dover, USA
Sokratis Makrogiannis , Department of Mathematical Sciences, Delaware State University, Dover, USA
pp. 317-324

Context-learning based electroencephalogram analysis for epileptic seizure detection (Abstract)

Guangxu Xun , Department of Computer Science and Engineering, SUNY at Buffalo, U.S.A
Xiaowei Jia , Department of Computer Science and Engineering, SUNY at Buffalo, U.S.A
Aidong Zhang , Department of Computer Science and Engineering, SUNY at Buffalo, U.S.A
pp. 325-330

Sparse multidimensional patient modeling using auxiliary confidence labels (Abstract)

Eric Heim , University of Pittsburgh, Department of Computer Science, PA, USA
Milos Hauskrecht , University of Pittsburgh, Department of Computer Science, PA, USA
pp. 331-336

Analysis of facial muscle activation in children with autism using 3D imaging (Abstract)

Manar D. Samad , Department of Electrical and Computer Engineering, Old Dominion University, Norfolk, VA 23529, United States of America
Jonna L. Bobzien , Department of Communication Disorder and Special Education, Old Dominion University, Norfolk, VA 23529, United States of America
John W. Harrington , Department of Pediatrics, Eastern Virginia Medical School, Norfolk, 23517, United States of America
Khan M. Iftekharuddin , Department of Electrical and Computer Engineering, Old Dominion University, Norfolk, VA 23529, United States of America
pp. 337-342

Modeling electronic health records in ensembles of semantic spaces for adverse drug event detection (Abstract)

Aron Henriksson , Department of Computer and Systems Sciences (DSV), Stockholm University, Sweden
Jing Zhao , Department of Computer and Systems Sciences (DSV), Stockholm University, Sweden
Henrik Bostrom , Department of Computer and Systems Sciences (DSV), Stockholm University, Sweden
Hercules Dalianis , Department of Computer and Systems Sciences (DSV), Stockholm University, Sweden
pp. 343-350

A generative Bayesian model to identify cancer driver genes (Abstract)

Christopher Ma , University of Mississippi, Department of Computer and Information Science, United States of America
Zhendong Zhao , University of Mississippi, Department of Computer and Information Science, United States of America
Tina Gui , University of Mississippi, Department of Computer and Information Science, United States of America
Yixin Chen , University of Mississippi, Department of Computer and Information Science, United States of America
Xin Dang , University of Mississippi, Department of Mathematics, United States of America
Dawn Wilkins , University of Mississippi, Department of Computer and Information Science, United States of America
pp. 351-356

A seeding-searching-ensemble method for gland segmentation and detection (Abstract)

Yizhe Zhang , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
Lin Yang , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
John D. MacKenzie , Department of Radiology & Biomedical Imaging, University of California, San Francisco, 94143, USA
Rageshree Ramachandran , Department of Pathology, University of California, San Francisco, 94143, USA
Danny Z. Chen , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
pp. 357-362

On frequency dependencies of sliding window correlation (Abstract)

Sadia Shakil , Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, 30332, United States of America
Shella Dawn Keilholz , Biomedical Engineering, Georgia Institute of Technology, Emory University, Atlanta, 30332, United States of America
Chin-Hui Lee , Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, 30332, United States of America
pp. 363-368

Robust point matching by l1 regularization (Abstract)

Jianbing Yi , College of Information Engineering, Shenzhen University, Guangdong, 518000, China
Yan-Ran Li , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
Xuan Yang , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
Tiancheng He , Houston Methodist Research Institute, Weill Cornell Medical College of Cornell University, Texas, 77030, USA
Guoliang Chen , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518000, China
pp. 369-374

Temporal weighting of clinical events in electronic health records for pharmacovigilance (Abstract)

Jing Zhao , Department of Computer and Systems Sciences (DSV), Stockholm University, Sweden
pp. 375-381

Level set segmentation using non-negative matrix factorization of brain MRI images (Abstract)

Dimah Dera , Electrical and Computer Engineering, Rowan University, Glassboro, NJ, United States of America
Nidhal Bouaynaya , Electrical and Computer Engineering, Rowan University, Glassboro, NJ, United States of America
Hassan M Fathallah-Shaykh , Departments of Neurology, Mathematics, Electrical, Mechanical and Biomedical Engineering, University of Alabama at Birmingham, United States of America
pp. 382-387

Using myoelectric signals to recognize grips and movements of the hand (Abstract)

Gene Shuman , Department of Computer Science, George Mason University, Fairfax, VA 22030, United States of America
Zoran Duric , Department of Computer Science, George Mason University, Fairfax, VA 22030, United States of America
Daniel Barbara , Department of Computer Science, George Mason University, Fairfax, VA 22030, United States of America
Jessica Lin , Department of Computer Science, George Mason University, Fairfax, VA 22030, United States of America
Lynn H. Gerber , Center for the Study of Chronic Illness and Disability, George Mason University, Fairfax, VA 22030, United States of America
pp. 388-394

Feature-level fusion of multimodal physiological signals for emotion recognition (Abstract)

Jing Chen , School of Information Science and Engineering, Lanzhou University, China
Bin Hu , School of Information Science and Engineering, Lanzhou University, China
Lixin Xu , School of Information Science and Engineering, Lanzhou University, China
Philip Moore , School of Information Science and Engineering, Lanzhou University, China
Yun Su , School of Information Science and Engineering, Lanzhou University, China
pp. 395-399

Quantitative assessment of the parallel MRI reconstruction using background noise uniformity (Abstract)

Fu-Hsing Wu , Interdisciplinary MRI/MRS Lab, Department of Electrical Engineering, Electronics and Bioinformatics, National Taiwan University, Taipei 106, Taiwan
Hsin-Chih Lo , Interdisciplinary MRI/MRS Lab, Graduate Institute of Biomedical, Electronics and Bioinformatics, National Taiwan University, Taipei 106, Taiwan
pp. 400-404

An image reconstruction model and hybrid algorithm for limited-angle projection data (Abstract)

Gao Hongxia , School of Automation Science and Engineering, South China University of Technology, Guangzhou, China, 510641
Luo Yinghao , School of Automation Science and Engineering, South China University of Technology, Guangzhou, China, 510641
Chen Kewei , School of Automation Science and Engineering, South China University of Technology, Guangzhou, China, 510641
Ma Ge , School of Automation Science and Engineering, South China University of Technology, Guangzhou, China, 510641
Wu Lixuan , School of Automation Science and Engineering, South China University of Technology, Guangzhou, China, 510641
pp. 405-408

Classification of Alzheimer's disease based on the combination of morphometric feature and texture feature (Abstract)

Yi Ding , School of Information and Software Engineering, University of Electronic Science and Technology of China, Chengdu, Sichuan Province, China
Cong Zhang , School of Information and Software Engineering, University of Electronic Science and Technology of China, Chengdu, Sichuan Province, China
Tian Lan , School of Information and Software Engineering, University of Electronic Science and Technology of China, Chengdu, Sichuan Province, China
Zhiguang Qin , School of Information and Software Engineering, University of Electronic Science and Technology of China, Chengdu, Sichuan Province, China
Xinjie Zhang , Department of Neurosurgery, West China Hospital, Sichuan University, Chengdu, China
Wei Wang , Department of Neurosurgery, West China Hospital, Sichuan University, Chengdu, China
pp. 409-412

Segmentation of Multicolor Fluorescence In-Situ Hybridization (M-FISH) image using an improved Fuzzy C-means clustering algorithm while incorporating both spatial and spectral information (Abstract)

Jingyao Li , Biomedical Engineering Department, Center for Bioinformatics and Genomics, Tulane University, New Orleans, LA, United States
Yu-Ping Wang , Biomedical Engineering Department, Biostatistics and Bioinformatics Department, Tulane University, New Orleans, LA, United States
pp. 413-416

On using Compressed Sensing and peak detection method for the Dynamic Instability parameters estimation for Microtubules modeled in three states (Abstract)

Shantia Yarahmadian , Mississippi State University, Department of Mathematics and Statistics, United States of America
Vineetha Menon , Mississippi State University, Department of Electrical Engineering, United States of America
Vahid Rezania , Macewan University, Department of Physical Sciences, Canada
pp. 417-420

Improved brain tumor growth prediction and segmentation in longitudinal brain MRI (Abstract)

Linmin Pei , Vision Lab, Electrical & Computer Engineering, Old Dominion University, Norfolk, VA 23529, USA
Syed M. S. Reza , Vision Lab, Electrical & Computer Engineering, Old Dominion University, Norfolk, VA 23529, USA
Khan M. Iftekharuddin , Vision Lab, Electrical & Computer Engineering, Old Dominion University, Norfolk, VA 23529, USA
pp. 421-424

Robust landmark-based image registration using l1 and l2 norm regularizations (Abstract)

Xuan Yang , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518060, China
Bo Wang , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518060, China
Yan-Ran Li , College of Computer Science and Software Engineering, Shenzhen University, Guangdong, 518060, China
Tiancheng He , Houston Methodist Research Institute, Weill Cornell Medical College of Cornell University, USA
pp. 425-428

Biomedical event trigger detection by dependency-based word embedding (Abstract)

Jian Wang , School of Computer Science and Technology, Dalian University of Technology, China
Jianhai Zhang , School of Computer Science and Technology, Dalian University of Technology, China
Yuan An , College of Computing & Informatics, Drexel University, Philadelphia, USA
Hongfei Lin , School of Computer Science and Technology, Dalian University of Technology, China
Zhihao Yang , School of Computer Science and Technology, Dalian University of Technology, China
Yijia Zhang , School of Computer Science and Technology, Dalian University of Technology, China
Yuanyuan Sun , School of Computer Science and Technology, Dalian University of Technology, China
pp. 429-432

Survival analysis via transduction for semi-supervised neural networks in medical prognosis (Abstract)

Faisal M. Khan , Department of Computer Science, Rutgers, The State University of New Jersey, Piscataway, USA
Casimir A. Kulikowski , Department of Computer Science, Rutgers, The State University of New Jersey, Piscataway, USA
pp. 433-437

On automated Flow Cytometric analysis for MRD estimation of Acute Lymphoblastic Leukaemia: A comparison among different approaches (Abstract)

Paolo Rota , CVL - TU Wien, Vienna (Austria)
Stefanie Groeneveld-Krentz , Charite' - Universitaetsmedizin, Berlin (Germany)
Michael Reiter , CVL - TU Wien, Vienna (Austria)
pp. 438-441

Audio signals encoding for cough classification using convolutional neural networks: A comparative study (Abstract)

Hui-Hui Wang , Department of Control Science and Engineering, Tongji University, Shanghai, 201804, China
Jia-Ming Liu , Department of Control Science and Engineering, Tongji University, Shanghai, 201804, China
Mingyu You , Department of Control Science and Engineering, Tongji University, Shanghai, 201804, China
Guo-Zheng Li , Department of Control Science and Engineering, Tongji University, Shanghai, 201804, China
pp. 442-445

Using Hidden Markov Models to capture temporal aspects of ultrasound data in prostate cancer (Abstract)

Layan Nahlawi , School of Computing, Queen's University, Canada
Farhad Imani , Dept. of Electrical and Computer Engineering, University of British Columbia, Canada
Mena Gaed , Robarts Research Institute, Canada
Jose A. Gomez , Dept. of Pathology, Schulich School of Medicine and Dentistry, Western University Ontario, Canada
Madeleine Moussa , Dept. of Pathology, Schulich School of Medicine and Dentistry, Western University Ontario, Canada
Eli Gibson , Dept. of Medical Biophysics, Western University Ontario, Canada
Aaron Fenster , Robarts Research Institute, Canada
Aaron D. Ward , Dept. of Medical Biophysics, Western University Ontario, Canada
Purang Abolmaesumi , Dept. of Electrical and Computer Engineering, University of British Columbia, Canada
Parvin Mousavi , School of Computing, Queen's University, Canada
Hagit Shatkay , School of Computing, Queen's University, Canada
pp. 446-449

A segmentation-based multi-scale framework for the classification of epithelial and stromal tissues in H&E images (Abstract)

Filiz Bunyak , Department of Computer Science University of Missouri, Columbia, 65211, United States of America
Adel Hafiane , INSA Centre Val de Loire, Univ. Orlans PRISME EA 4229, F-18022 Bourges, France
Zahraa Al-Milaji , Department of Computer Science University of Missouri, Columbia, 65211, United States of America
Ilker Ersoy , Department of Pathology & Anatomical Sciences University of Missouri, Columbia, 65212, United States of America
Anoop Haridas , Department of Computer Science University of Missouri, Columbia, 65211, United States of America
Kannappan Palaniappan , Department of Computer Science University of Missouri, Columbia, 65211, United States of America
pp. 450-453

EEG dynamic source localization using Marginalized Particle Filtering (Abstract)

Bradley Ebinger , Department of Electrical and Computer Engineering, Rowan University, USA
Nidhal Bouaynaya , Department of Electrical and Computer Engineering, Rowan University, USA
Petia Georgieva , Department of Electronics, Telecommunications, and Informatics, University of Aveiro, Portugal
Lyudmila Mihaylova , Department of Automatic Control and Systems Engineering, University of Sheffield, United Kingdom
pp. 454-457

Feature selection of high-dimensional biomedical data using improved SFLA for disease diagnosis (Abstract)

Yongqiang Dai , The School of Information Science and Engineering, Lanzhou University, China
Bin Hu , The School of Information Science and Engineering, Lanzhou University, China
Yun Su , The School of Information Science and Engineering, Lanzhou University, China
Chengsheng Mao , The School of Information Science and Engineering, Lanzhou University, China
Jing Chen , The School of Information Science and Engineering, Lanzhou University, China
Xiaowei Zhang , The School of Information Science and Engineering, Lanzhou University, China
Philip Moore , The School of Information Science and Engineering, Lanzhou University, China
Lixin Xu , The School of Information Science and Engineering, Lanzhou University, China
Hanshu Cai , The School of Information Science and Engineering, Lanzhou University, China
pp. 458-463

Learning to rank for biomedical information retrieval (Abstract)

Bo Xu , School of Computer Science and Technology, Dalian University of Technology, China 116024
Hongfei Lin , School of Computer Science and Technology, Dalian University of Technology, China 116024
Yuan Lin , School of Public Administration and Law, Dalian University of Technology, China 116024
Yunlong Ma , School of Computer Science and Technology, Dalian University of Technology, China 116024
Liang Yang , School of Computer Science and Technology, Dalian University of Technology, China 116024
Jian Wang , School of Computer Science and Technology, Dalian University of Technology, China 116024
Zhihao Yang , School of Computer Science and Technology, Dalian University of Technology, China 116024
pp. 464-469

Identification of DNA-binding proteins by auto-cross covariance transformation (Abstract)

Qiwen Dong , School of Computer Science, Fudan University, Shanghai 200433, China
Shanyi Wang , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Guangdong 518055, China
Kai Wang , College of Animal Science and technology, Jilin Agricultural University, Changchun 130118, China
Xuan Liu , College of Engineering, Shanghai Ocean University, 201303, China
Bin Liu , School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Guangdong 518055, China
pp. 470-475

Algorithmic detection of inconsistent modeling among SNOMED CT concepts by combining lexical and structural indicators (Abstract)

Ankur Agrawal , Department of Computer Science, Manhattan College, New York, USA
Yehoshua Perl , Department of Computer Science, New Jersey Institute of Technology, Newark, USA
Chris Ochs , Department of Computer Science, New Jersey Institute of Technology, Newark, USA
Gai Elhanan , Department of Computer Science, New Jersey Institute of Technology, Newark, USA
pp. 476-483

Scalable biobanking: A modular electronic Honest Broker and Biorepository for integrated clinical, specimen and genomic research (Abstract)

Alex S. Felmeister , Dept. of Biomedical and Health Informatics, The Children's Hospital of Phila., USA
Tyler J. Rivera , Dept. of Biomedical and Health Informatics, The Children's Hospital of Phila., USA
Aaron J. Masino , Dept. of Biomedical and Health Informatics, The Children's Hospital of Phila., USA
Adam C. Resnick , Department of Pediatrics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, USA
Jeffrey W. Pennington , Dept. of Biomedical and Health Informatics, The Children's Hospital of Phila., USA
pp. 484-490

Supporting HIV literature screening with data sampling and supervised learning (Abstract)

Hayda Almeida , Centre for Structural and Functional Genomics, Concordia University, Canada
Marie-Jean Meurs , Centre for Structural and Functional Genomics, Concordia University, Canada
Leila Kosseim , Dept. of Computer Science and Software Engineering, Concordia University, Canada
Adrian Tsang , Centre for Structural and Functional Genomics, Concordia University, Canada
pp. 491-496

Implicit knowledge discovery in biomedical ontologies: Computing interesting relatednesses (Abstract)

Tian Bai , College of Computer Science and Technology, Jilin University, Changchun, China
Leiguang Gong , College of Computer Science and Technology, Jilin University, Changchun, China
Casimir A. Kulikowski , Department of Computer Science, Rutgers, The State University of New Jersey, Piscataway, USA
Lan Huang , College of Computer Science and Technology, Jilin University, Changchun, China
pp. 497-502

Accelerating large-scale biological database search on Xeon Phi-based neo-heterogeneous architectures (Abstract)

Haidong Lan , School of Computer Science and Technology, Engineering Research Center of Digital Media Technology, Ministry of Education, Shandong University, Jinan City, China
Weiguo Liu , School of Computer Science and Technology, Engineering Research Center of Digital Media Technology, Ministry of Education, Shandong University, Jinan City, China
Bertil Schmidt , Johannes Gutenberg University Mainz, Germany
Bingqiang Wang , National Supercomputing Center in Shenzhen, China
pp. 503-510

A two-stage clustering technique for automatic biaxial gating of flow cytometry data (Abstract)

M. Baran Pouyan , Quality of Life Technology Laboratory, The University of Texas at Dallas, Richardson, 75080, USA
V. Jindal , Quality of Life Technology Laboratory, The University of Texas at Dallas, Richardson, 75080, USA
J. Birjandtalab , Quality of Life Technology Laboratory, The University of Texas at Dallas, Richardson, 75080, USA
M. Nourani , Quality of Life Technology Laboratory, The University of Texas at Dallas, Richardson, 75080, USA
pp. 511-516

An integrative measure of graph- and vector-based semantic similarity using information content distance (Abstract)

Qiaoli Hu , Department of Computer Science, Baylor University, Waco, TX, USA
Young-Rae Cho , Department of Computer Science, Baylor University, Waco, TX, USA
pp. 517-522

On stabbing queries for generalized longest repeat (Abstract)

Bojian Xu , Department of Computer Science, Eastern Washington University, 99004, USA
pp. 523-530

Integrating association mining into relevance feedback for biomedical literature search (Abstract)

Yanqing Ji , Department of Electrical and Computer Engineering, Gonzaga University, Spokane, Washington, USA
Hao Ying , Department of Electrical and Computer Engineering, Wayne State University, Detroit, Michigan, USA
John Tran , Frontier Behavioral Health, Spokane, Washington, USA
Peter Dews , Department of Medicine, St. Mary Mercy Hospital, Livonia, Michigan, USA
R. Michael Massanari , Research for The Critical Junctures Institute, Bellingham, Washington, USA
pp. 531-536

Improved algorithms for finding edit distance based motifs (Abstract)

Soumitra Pal , Computer Science and Engineering, University of Connecticut, 371 Fairfield Road, Storrs, 06269, USA
Sanguthevar Rajasekaran , Computer Science and Engineering, University of Connecticut, 371 Fairfield Road, Storrs, 06269, USA
pp. 537-542

Discovery of the relations between genetic polymorphism and adverse drug reactions (Abstract)

Zhaohui Liang , School of Information Technology, York University, Toronto, ON, M3J1P3, Canada
Gang Zhang , School of Automation, Guangdong University of Technology, China
Jimmy Xiangji Huang , School of Computer Science, Central China Normal University, Wuhan, China
pp. 543-548

Identifying inorganic material affinity classes for peptide sequences based on context learning (Abstract)

Guangxu Xun , Department of Computer, Science and Engineering, SUNY at Buffalo, U.S.A
Xiaoyi Li , Department of Computer, Science and Engineering, SUNY at Buffalo, U.S.A
Marc R. Knecht , Department of Chemistry, University of Miami, Coral Gables, U.S.A
Paras N. Prasad , Department of Chemistry, SUNY at Buffalo, U.S.A
Mark T. Swihart , Department of Chemical and Biological Engineering, SUNY at Buffalo, U.S.A
Tiffany R. Walsh , Institute for Frontier Materials, Deakin University, Geelong, Australia
Aidong Zhang , Department of Computer, Science and Engineering, SUNY at Buffalo, U.S.A
pp. 549-554

Identifying the pre-transition state during biological processes by hidden Markov model (Abstract)

Pei Chen , School of Computer Science and Engineering, South China University of Technology, Guangzhou, China, 510640
Shuoyang Qiu , School of Engineering, The University of Edinburgh, EH9 3DW, Scotland
Yue Wang , Stanford University, CA, USA, 94305
Yongjun Li , School of Computer Science and Engineering, South China University of Technology, Guangzhou, China, 510640
pp. 555-562

An integrative genomic study for multimodal genomic data using multi-block bipartite graph (Abstract)

Mingon Kang , Department of Computer Science & Information Systems, Texas A&M University - Commerce, USA 75428
Juyoung Park , Department of Computer Science & Engineering, Hanyang University, Republic of Korea
Dong-Chul Kim , Department of Computer Science, University of Texas - Rio Grande Valley, Edinburg, USA 78539
Ashis K. Biswas , Department of Computer Science and Engineering, University of Texas at Arlington, USA 76019
Chunyu Liu , Department of Psychiatry, University of Illinois at Chicago, USA 66012
Jean Gao , Department of Computer Science and Engineering, University of Texas at Arlington, USA 76019
pp. 563-568

Reference sequence selection for motif searches (Abstract)

Qiang Yu , School of Computer Science and Technology, Xidian University, Xi'an, 710071, China
Hongwei Huo , School of Computer Science and Technology, Xidian University, Xi'an, 710071, China
Ruixing Zhao , School of Computer Science and Technology, Xidian University, Xi'an, 710071, China
Dazheng Feng , School of Electronic Engineering, Xidian University, Xi'an, 710071, China
Jeffrey Scott Vitter , Department of Electrical Engineering & Computer Science, The University of Kansas, Lawrence, 66047, USA
Jun Huan , Department of Electrical Engineering & Computer Science, The University of Kansas, Lawrence, 66047, USA
pp. 569-574

A novel approach to identify shared fragments in drugs and natural products (Abstract)

Akshay Balasubramanya , Information Systems and Quantitative Analysis Department, University of Nebraska at Omaha, 68182, USA
Ishwor Thapa , School of Interdisciplinary Informatics, University of Nebraska at Omaha, 68182, USA
Dhundy Bastola , School of Interdisciplinary Informatics, University of Nebraska at Omaha, 68182, USA
Dario Ghersi , School of Interdisciplinary Informatics, University of Nebraska at Omaha, 68182, USA
pp. 575-580

Integrating omics data for identifying disease subtypes: A multiplex network-based approach (Abstract)

Haiying Wang , Computer Science Research Institute, School of Computing and Mathematics, University of Ulster, Co.Antrim, Northern Ireland, UK
Huiru Zheng , Computer Science Research Institute, School of Computing and Mathematics, University of Ulster, Co.Antrim, Northern Ireland, UK
pp. 581-586

Extending rule-based methods to model molecular geometry (Abstract)

Brittany Hoard , Department of Computer Science, University of New Mexico, Albuquerque, 87131, USA
Bruna Jacobson , Department of Computer Science, University of New Mexico, Albuquerque, 87131, USA
Kasra Manavi , Department of Computer Science, University of New Mexico, Albuquerque, 87131, USA
Lydia Tapia , Department of Computer Science, University of New Mexico, Albuquerque, 87131, USA
pp. 587-594

Semantic rules for extracting proteins functions information from biomedical abstracts (Abstract)

Kamal Taha , Electrical and Computer Engineering Department, Khalifa University, UAE
pp. 595-598

A transition-based model for jointly extracting drugs, diseases and adverse drug events (Abstract)

Fei Li , Computer School, Wuhan University, China
Donghong Ji , Computer School, Wuhan University, China
Xiaomei Wei , College of Informatics, Huazhong Agriculture University, Wuhan, China
Tao Qian , Computer School, Wuhan University, China
pp. 599-602

The effective diagnosis of schizophrenia by using multi-layer RBMs deep networks (Abstract)

Chen Qiao , School of Mathematics and Statistics, Xi'an Jiaotong University, 710049, China
Dong-Dong Lin , Department of Biomedical Engineering, Tulane University, New Orleans, LA, 70118, USA
Shao-Long Cao , Department of Biomedical Engineering, Tulane University, New Orleans, LA, 70118, USA
Yu-Ping Wang , Department of Biomedical Engineering, Tulane University, New Orleans, LA, 70118, USA
pp. 603-606

ImmPort: Shared research data for bioinformatics and immunology (Abstract)

Patrick J. Dunn , Northrop Grumman Information Systems Health IT, Rockville, MD 20850, USA
Elizabeth Thomson , Northrop Grumman Information Systems Health IT, Rockville, MD 20850, USA
John Campbell , Northrop Grumman Information Systems Health IT, Rockville, MD 20850, USA
Thomas Smith , Northrop Grumman Information Systems Health IT, Rockville, MD 20850, USA
Vincent Desborough , Northrop Grumman Information Systems Health IT, Rockville, MD 20850, USA
Jeffrey Wiser , Northrop Grumman Information Systems Health IT, Rockville, MD 20850, USA
Henry Schaefer , ESAC, Inc., Rockville, MD 20850, USA
Sanchita Bhattacharya , Department of Pediatrics, UCSF School of Medicine, San Francisco CA 94143, USA
Atul J. Butte , Department of Pediatrics, UCSF School of Medicine, San Francisco CA 94143, USA
Sandra Andorf , Department of Pediatrics, Stanford University Palo Alto, CA 94305-5415, USA
Mazen Nasrallah , Department of Medicine, Cleveland Clinic Foundation, OH 44106, USA
pp. 607-610

A text mining application for linking functionally stressed-proteins to their post-translational modifications (Abstract)

Oliver Bonham-Carter , School of Interdisciplinary Informatics, University of Nebraska at Omaha, 6001 Dodge Street, 68182-0116, USA
Dhundy R. Bastola , School of Interdisciplinary Informatics, University of Nebraska at Omaha, 6001 Dodge Street, 68182-0116, USA
pp. 611-614

Sparse omics-network regularization to increase interpretability and performance of linear classification models (Abstract)

Michael Andel , Department of Computer Science, Czech Technical University in Prague, Technická 2, Czech Republic
Filip Masri , Department of Computer Science, Czech Technical University in Prague, Technická 2, Czech Republic
Jiri Klema , Department of Computer Science, Czech Technical University in Prague, Technická 2, Czech Republic
Zdenek Krejcik , Department of Genomics, Institute of Hematology and Blood Transfusion, U Nemocnice 1, Prague, Czech Republic
Monika Belickova , Department of Genomics, Institute of Hematology and Blood Transfusion, U Nemocnice 1, Prague, Czech Republic
pp. 615-620

A domain ontology for the Non-Coding RNA field (Abstract)

Jingshan Huang , South Biomedical Informatics Group, School of Computing, University of South Alabama, Mobile, 36688, U.S.A.
Karen Eilbeck , Department of Biomedical Informatics, School of Medicine, University of Utah, Salt Lake City, 84112, U.S.A.
Judith A. Blake , Genome Informatics, The Jackson Laboratory, Bar Harbor, Maine 04609, U.S.A.
Dejing Dou , CIS Dept., University of Oregon, Eugene, 97403, U.S.A.
Darren A. Natale , Georgetown University Medical Center, Washington D.C. 20007, U.S.A.
Alan Ruttenberg , University at Buffalo, New York 14214, U.S.A.
Barry Smith , Department of Philosophy, University at Buffalo, New York 14260, U.S.A.
Michael T. Zimmermann , Mayo Clinic College of Medicine, Rochester, Minnesota 55905, U.S.A.
Guoqian Jiang , Mayo Clinic College of Medicine, Rochester, Minnesota 55905, U.S.A.
Yu Lin , University of Miami, Florida 33146, U.S.A.
Bin Wu , First Affiliated Hospital, Kunming Medical University, Yunnan 650032, China
Yongqun He , University of Michigan, Ann Arbor, 48109, U.S.A.
Shaojie Zhang , University of Central Florida, Orlando, 32816, U.S.A.
Xiaowei Wang , Washington University School of Medicine, St. Louis, Missouri 63108, U.S.A.
He Zhang , University of South Alabama, Mobile, 36688, U.S.A.
Zixing Liu , MCI, University of South Alabama, Mobile, 36604, U.S.A.
Ming Tan , MCI, University of South Alabama, Mobile, 36604, U.S.A.
pp. 621-624

Training word embeddings for deep learning in biomedical text mining tasks (Abstract)

Zhenchao Jiang , School of Computer Science and Technology, Dalian University of Technology, China
Lishuang Li , School of Computer Science and Technology, Dalian University of Technology, China
Degen Huang , School of Computer Science and Technology, Dalian University of Technology, China
Liuke Jin , School of Computer Science and Technology, Dalian University of Technology, China
pp. 625-628

HPMA: High-performance metagenomic alignment tool, on a large-scale GPU cluster (Abstract)

Ibrahim Savran , Computer Engineering, Karadeniz Technical University 61080, Trabzon, Turkey
John R. Rose , Computer Science and Engineering, University of South Carolina, 29208, USA
pp. 629-634

Predicting microbial interactions by using network-constrained regularization incorporating covariate coefficients and connection signs (Abstract)

Yan Wang , National Engineering Research Center for E-Learning, Central China Normal University, Wuhan 430079, China
Xiaohua Hu , School of Computer Science, Central China Normal University, Wuhan 430079, China
Xingpeng Jiang , School of Computer Science, Central China Normal University, Wuhan 430079, China
Tingting He , School of Computer Science, Central China Normal University, Wuhan 430079, China
Jie Yuan , School of Computer Science, Central China Normal University, Wuhan 430079, China
pp. 635-638

Sequential data selection for predicting the pathogenic effects of sequence variation (Abstract)

Mark F. Rogers , Intelligent Systems Laboratory, Merchant Venturers School of Engineering, University of Bristol, BS8 1UB, U.K.
Colin Campbell , Intelligent Systems Laboratory, Merchant Venturers School of Engineering, University of Bristol, BS8 1UB, U.K.
Hashem A. Shihab , MRC Integrative Epidemiology Unit, Bristol Centre for Systems Biomedicine, University of Bristol, BS8 2BN, U.K.
Tom R. Gaunt , MRC Integrative Epidemiology Unit, Bristol Centre for Systems Biomedicine, University of Bristol, BS8 2BN, U.K.
Matthew Mort , Institute of Medical Genetics, Cardiff University, CF14 4XN, U.K.
David N. Cooper , Institute of Medical Genetics, Cardiff University, CF14 4XN, U.K.
pp. 639-644

Modeling nuclear shape with boundary representation of object (Abstract)

Shuliang Wang , School of Software, Beijing Institute of Technology, China, 100081
Ying Li , State Key Laboratory of Information Engineering in Surveying, Mapping and Remote Sensing, Wuhan University, China, 430079
Dakui Wang , International School of Software, Wuhan University, China, 430079
Hanning Yuan , School of Software, Beijing Institute of Technology, China, 100081
pp. 645-648

Biomedical named entity recognition based on extended Recurrent Neural Networks (Abstract)

Lishuang Li , School of Computer Science and Technology, Dalian University of Technology, China
Liuke Jin , School of Computer Science and Technology, Dalian University of Technology, China
Zhenchao Jiang , School of Computer Science and Technology, Dalian University of Technology, China
Dingxin Song , School of Computer Science and Technology, Dalian University of Technology, China
Degen Huang , School of Computer Science and Technology, Dalian University of Technology, China
pp. 649-652

A new approach for estimating probability of metastasis at diagnosis (Abstract)

Shuhao Sun , School of Mathematical Science, Monash University, Melbourne 3800, Australia
Fima Klebaner , School of Mathematical Science, Monash University, Melbourne 3800, Australia
Tianhai Tian , School of Mathematical Science, Monash University, Melbourne 3800, Australia
pp. 653-656

TMDFM: A data fusion model for combined detection of tumor markers (Abstract)

Chi Yuan , Nanjing University of Science and Technology, 210094, China
Yongli Wang , Nanjing University of Science and Technology, 210094, China
Yanchao Li , Xiaohui Jiang and Isma Masood, Nanjing University of Science and Technology, 210094, China
pp. 657-660

Inference of gene regulatory networks via multiple data sources and a recommendation method (Abstract)

Makbule Gulcin Ozsoy , Department of Computer Engineering, Middle East Technical University, Ankara, Turkey
Faruk Polat , Department of Computer Engineering, Middle East Technical University, Ankara, Turkey
Reda Alhajj , Department of Computer Science, University of Calgary, Alberta, Canada
pp. 661-664

SphereGrinder - reference structure-based tool for quality assessment of protein structural models (Abstract)

Piotr Lukasiak Maciej Antczak , Institute of Computing Science, Poznan University of Technology, Piotrowo 2, 60-965, Poland
Tomasz Ratajczak , Institute of Computing Science, Poznan University of Technology, Piotrowo 2, 60-965, Poland
Jacek Blazewicz , Institute of Computing Science, Poznan University of Technology, Piotrowo 2, 60-965, Poland
Piotr Lukasiak , Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704 Poznan, Poland
Jacek Blazewicz , Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704 Poznan, Poland
pp. 665-668

A new method for prioritizing drug repositioning candidates extracted by literature-based discovery (Abstract)

Majid Rastegar-Mojarad , Department of Health Sciences Research, Mayo Clinic, USA
Ravikumar Komandur Elayavilli , Department of Health Sciences Research, Mayo Clinic, USA
Dingcheng Li , Department of Health Sciences Research, Mayo Clinic, USA
Rashmi Prasad , University of Wisconsin-Milwaukee, USA
Hongfang Liu , Department of Health Sciences Research, Mayo Clinic, USA
pp. 669-674

Detecting adverse drug effects using link classification on twitter data (Abstract)

Satya Katragadda , Center for Advanced Computer Studies, University of Louisiana at Lafayette, USA
Harika Karnati , Center for Advanced Computer Studies, University of Louisiana at Lafayette, USA
Murali Pusala , Center for Visual and Decision Informatics, University of Louisiana at Lafayette, USA
Vijay Raghavan , Center for Visual and Decision Informatics, University of Louisiana at Lafayette, USA
Ryan Benton , School of Computing, University of South Alabama, Mobile, USA
pp. 675-679

ENISI multiscale modeling of mucosal immune responses driven by high performance computing (Abstract)

Vida Abedi , Nutritional Immunology and Molecular Medicine Laboratory, Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, 24061 Blacksburg, USA
Raquel Hontecillas , Nutritional Immunology and Molecular Medicine Laboratory, Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, 24061 Blacksburg, USA
Stefan Hoops , Nutritional Immunology and Molecular Medicine Laboratory, Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, 24061 Blacksburg, USA
Nathan Liles , Nutritional Immunology and Molecular Medicine Laboratory, Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, 24061 Blacksburg, USA
Adria Carbo , BioTherapeutics Inc., 1800 Kraft Drive, Suite 200, Blacksburg, VA 24060, USA
Pinyi Lu , Nutritional Immunology and Molecular Medicine Laboratory, Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, 24061 Blacksburg, USA
Casandra Philipson , BioTherapeutics Inc., 1800 Kraft Drive, Suite 200, Blacksburg, VA 24060, USA
Josep ABassaganya-Riera , Nutritional Immunology and Molecular Medicine Laboratory, Virginia Bioinformatics Institute, Virginia Tech, 1015 Life Science Circle, 24061 Blacksburg, USA
pp. 680-684

Large scale multi-species palindrome study using distributed in-memory computing (Abstract)

Devin Petersohn , Department of Computer Science, University of Missouri, Columbia, 65211, USA
Matthew Spencer , Informatics Institute, University of Missouri, Columbia, 65211, USA
Alex Fratila , Department of Computer Science, University of Missouri, Columbia, 65211, USA
Chi-Ren Shyu , Department of Computer Science, University of Missouri, Columbia, 65211, USA
pp. 685-690

Bayesian classification with local probabilistic model assumption in aiding medical diagnosis (Abstract)

Bin Hu , School of Information Science and Engineering, Lanzhou University, China
Chengsheng Mao , School of Information Science and Engineering, Lanzhou University, China
Xiaowei Zhang , School of Information Science and Engineering, Lanzhou University, China
Yongqiang Dai , School of Information Science and Engineering, Lanzhou University, China
pp. 691-694

Collaborative and trajectory prediction models of medical conditions by mining patients' Social Data (Abstract)

Xiang Ji , Department of Computer Science, New Jersey Institute of Technology, Newark, USA
Soon Ae Chun , Department of Information Systems and Informatics, City University of New York, Staten Island, USA
James Geller , Department of Computer Science, New Jersey Institute of Technology, Newark, USA
Vincent Oria , Department of Computer Science, New Jersey Institute of Technology, Newark, USA
pp. 695-700

Facial color management for mobile health in the wild (Abstract)

Jinling Niu , Department of Control Science and Engineering, Tongji University, Shanghai, China
Changbo Zhao , Department of Control Science and Engineering, Tongji University, Shanghai, China
Guo-Zheng Li , Department of Control Science and Engineering, Tongji University, Shanghai, China
Wei Zhang , Department of Control Science and Engineering, Tongji University, Shanghai, China
pp. 701-706

Classification with imbalance: A similarity-based method for predicting respiratory failure (Abstract)

Harsh Shrivastava , Xerox Research Centre India, Bangalore, India
Vijay Huddar , Xerox Research Centre India, Bangalore, India
Sakyajit Bhattacharya , Xerox Research Centre India, Bangalore, India
Vaibhav Rajan , Xerox Research Centre India, Bangalore, India
pp. 707-714

Framework for workflow-driven Clinical Decision Support in oncology (Abstract)

Anca Bucur , Precision and Decentralized Diagnostics, Philips Research Europe, Eindhoven, the Netherlands
Jasper van Leeuwen , Precision and Decentralized Diagnostics, Philips Research Europe, Eindhoven, the Netherlands
Norbert Graf , Department of Pediatric Oncology and Hematology, Saarland University, Homburg, Germany
pp. 715-722

A grammar-based approach to model the patient's clinical trajectory after a mild traumatic brain injury (Abstract)

Filip Dabek , National Intrepid Center of Excellence, Walter Reed National Military Medical Center, Bethesda, MD, USA
Jesus J. Caban , National Intrepid Center of Excellence, Walter Reed National Military Medical Center, Bethesda, MD, USA
pp. 723-730

Insight: Semantic provenance and analysis platform for multi-center neurology healthcare research (Abstract)

Priya Ramesh , Division of Medical Informatics, Case Western Reserve University, Cleveland, OH, USA
Annan Wei , Division of Medical Informatics, Case Western Reserve University, Cleveland, OH, USA
Elisabeth Welter , Neurological Institute, University Hospitals Case Medical Center, Cleveland, OH, USA
Yvan Bamps , Rollins School of Public Health, Emory University, Atlanta, GA, USA
Shelley Stoll , Center for Managing Chronic Disease, University of Michigan, Ann Arbor, USA
Ashley Bukach , Neurological Institute, University Hospitals Case Medical Center, Cleveland, OH, USA
Martha Sajatovic , Neurological Institute, University Hospitals Case Medical Center, Cleveland, OH, USA
Satya S. Sahoo , Division of Medical Informatics, Case Western Reserve University, Cleveland, OH, USA
pp. 731-736

Prediction of Systemic-to-Pulmonary Artery shunt surgery outcomes using administrative data (Abstract)

Sara Moein , Division of Pediatric Cardiothoracic Surgery, Washington University School of Medicine, MO, USA
Hao Yan , Department of Computer Science and Engineering, Washington University in St. Louis, MO, USA
Sanmay Das , Department of Computer Science and Engineering, Washington University in St. Louis, MO, USA
Matthew Hall , Children's Hospital Association, Overland Park, KS, USA
Pirooz A Eghtesady , Division of Pediatric Cardiothoracic Surgery, Washington University School of Medicine, MO, USA
pp. 737-741

Chronic lymphocytic leukemia patient classification methodology through flow cytometry analysis (Abstract)

Evdoxia Papadopoulou , Informatics and Telematics Institute, Centre of Research and Technology, Thessaloniki, Greece, 57001
Konstantia Kotta , Institute of Applied Bioscience, Centre of Research and Technology, Thessaloniki, Greece, 57001
Panagiotis Moschonas , Informatics and Telematics Institute, Centre of Research and Technology, Thessaloniki, Greece, 57001
Vassiliki Douka , Hematology Department and HCT Unit, G. Papanicolaou Hospital, Thessaloniki, Greece, 57010
Achilles Anagnostopoulos , Hematology Department and HCT Unit, G. Papanicolaou Hospital, Thessaloniki, Greece, 57010
Kostas Stamatopoulos , Institute of Applied Bioscience, Centre of Research and Technology, Thessaloniki, Greece, 57001
Dimitrios Tzovaras , Informatics and Telematics Institute, Centre of Research and Technology, Thessaloniki, Greece, 57001
pp. 742-745

SmartStep 2.0 - A completely wireless, versatile insole monitoring system (Abstract)

Nagaraj Hegde , Dept. of Electrical and Computer Engineering, The University of Alabama, Tuscaloosa, USA
Edward S. Sazonov , Dept. of Electrical and Computer Engineering, The University of Alabama, Tuscaloosa, USA
pp. 746-749

A method for imputation of semantic class in diagnostic radiology text (Abstract)

Eamon Johnson , Department of Electrical Engineering and Computer Science, Case Western Reserve University, Cleveland, OH, USA
W. Christopher Baughman , Department of Radiology, MetroHealth Medical Center, Cleveland, OH, USA
Gultekin Ozsoyoglu , Department of Electrical Engineering and Computer Science, Case Western Reserve University, Cleveland, OH, USA
pp. 750-755

A highly parallel next-generation DNA sequencing data analysis pipeline in Hadoop (Abstract)

Kareem S. Aggour , Knowledge Discovery Lab, GE Global Research, USA
Vijay S. Kumar , Knowledge Discovery Lab, GE Global Research, USA
Dipen P. Sangurdekar , Computational Biology and Biostatistics Lab, GE Global Research, USA
Lee A. Newberg , Computational Biology and Biostatistics Lab, GE Global Research, USA
Chinnappa D. Kodira , Computational Biology and Biostatistics Lab, GE Global Research, USA
pp. 756-763

Structuring unstructured clinical narratives in OpenMRS with medical concept extraction (Abstract)

Ryan M Eshleman , Department of Computer Science, San Francisco State University, 1600 Holloway Avenue, CA, USA
Hui Yang , Department of Computer Science, San Francisco State University, 1600 Holloway Avenue, CA, USA
Barry Levine , Department of Computer Science, San Francisco State University, 1600 Holloway Avenue, CA, USA
pp. 764-769

The Medical Knowledge Cockpit: Real-time analysis of big medical data enabling precision medicine (Abstract)

Matthieu-P. Schapranow , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Milena Kraus , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Cindy Perscheid , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Cornelius Bock , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Franz Liedke , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
Hasso Plattner , Hasso Plattner Institute, Enterprise Platform and Integration Concepts, August-Bebel-Str. 88, 14482 Potsdam, Germany
pp. 770-775

A GRReat framework for incident response in healthcare (Abstract)

Subrata Acharya , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
William Glenn , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
Matthew Carr , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
pp. 776-778

Patient portals: Anytime, anywhere (Abstract)

Subrata Acharya , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
Gabriel Susai , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
Manoj Pillai , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
pp. 779-781

OWASP inspired mobile security (Abstract)

Subrata Acharya , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
Branden Ehrenreich , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
James Marciniak , Dept. of Computer & Info. Sciences, Towson, Maryland, USA
pp. 782-784

CancerVis: An interactive exploratory tool for cancer biomarker analysis (Abstract)

Lei Zhang , Department of Computer Science, Georgia State University, Atlanta, 30303, USA
Sergey Klimov , Department of Biology, Georgia State University, Atlanta, 30303, USA
Ying Zhu , Department of Computer Science, Georgia State University, Atlanta, 30303, USA
pp. 785-792

Systematic analysis of machine learning algorithms on EEG data for brain state intelligence (Abstract)

Alexander Chan , Department of Statistics, University of California, Los Angeles, 90024, USA
Christopher E. Early , Department of Science and Computer Engineering, University of Houston - Clear Lake, TX 77058, USA
Sishir Subedi , Department of Computer Science and Engineering Technology, University of Houston - Downtown, TX 77002, USA
Yuezhe Li , Department of Mathematics, Illinois State University, Normal, 61761, USA
Hong Lin , Department of Computer Science and Engineering Technology, University of Houston - Downtown, TX 77002, USA
pp. 793-799

Shared genetic architecture in autoimmune disease - preliminary analysis (Abstract)

Leqi Liu , Bryn Mawr College, PA 19010, USA
Jia Tao , Computer Science Department, The College of New Jersey, Ewing, 08628, USA
Ziyan Yang , Bryn Mawr College, PA 19010, USA
Fadi Towfic , Immuneering Corporation, Cambridge, MA 02142, USA
pp. 800-806

Imbalanced learning to predict long stay Emergency Department patients (Abstract)

Ali Azari , Department of Information System, University of Maryland, Baltimore County, 21250, USA
Vandana P. Janeja , Department of Information System, University of Maryland, Baltimore County, 21250, USA
Scott Levin , Emergency Medicine, Johns Hopkins University, Baltimore, MD 21205, USA
pp. 807-814

Analyzing epileptogenic brain connectivity networks using clinical EEG data (Abstract)

Abhijit Dasgupta , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
Ritankar Das , Department of Bioinformatics, West Bengal University of Technology, Kolkata, India
Losiana Nayak , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
Rajat K. De , Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India
pp. 815-821

Exploration of topological torsion fingerprints (Abstract)

Skoda Petr , Faculty of Mathematics and Physics, Charles University in Prague, Czech Republic
Hoksza David , Faculty of Mathematics and Physics, Charles University in Prague, Czech Republic
pp. 822-828

Design of a real-time morphology-based anomaly detection method from ECG streams (Abstract)

DuyHoa Ngo , Department of Electrical and Computer Engineering, National University Singapore, Singapore
Bharadwaj Veeravalli , Department of Electrical and Computer Engineering, National University Singapore, Singapore
pp. 829-836

Clinical processes from various angles - amplifying BPMN for integrated hospital management (Abstract)

Richard Braun , Technische Universität Dresden, Wirtschaftsinformatik, esp. Systems Development, 01062, Germany
Martin Burwitz , Technische Universität Dresden, Wirtschaftsinformatik, esp. Systems Development, 01062, Germany
Hannes Schlieter , Technische Universität Dresden, Wirtschaftsinformatik, esp. Systems Development, 01062, Germany
Martin Benedict , Technische Universität Dresden, Wirtschaftsinformatik, esp. Systems Development, 01062, Germany
pp. 837-845

Direct higher order fuzzy rule-based classification system: Application in mortality prediction (Abstract)

Abolfazl Doostparast Torshizi , Department of Computer Science, University of California, Santa Barbara, 93106, USA
Linda Petzold , Department of Computer Science, University of California, Santa Barbara, 93106, USA
Mitchell Cohen , Department of Surgery, University of California, San Francisco, 94110, USA
pp. 846-852

Risk prediction of stroke: A prospective statewide study on patients in Maine (Abstract)

Le Zheng , Departments of Surgery, Stanford University, CA, USA
Yue Wang , Departments of Surgery, Stanford University, CA, USA
Shiying Hao , Departments of Surgery, Stanford University, CA, USA
Karl G. Sylvester , Departments of Surgery, Stanford University, CA, USA
Xuefeng B. Ling , Departments of Surgery, Stanford University, CA, USA
Andrew Young Shin , Departments of Pediatrics, Stanford University, CA, USA
Bo Jin , BISolutions Inc., Palo Alto, CA, USA
Chunqing Zhu , BISolutions Inc., Palo Alto, CA, USA
Hua Jin , BISolutions Inc., Palo Alto, CA, USA
Dorothy Dai , BISolutions Inc., Palo Alto, CA, USA
Haihua Xu , BISolutions Inc., Palo Alto, CA, USA
Frank Stearns , BISolutions Inc., Palo Alto, CA, USA
Eric Widen , BISolutions Inc., Palo Alto, CA, USA
Devore S. Culver , HealthInfoNet, Portland, ME, USA
Shaun T. Alfreds , HealthInfoNet, Portland, ME, USA
Todd Rogow , HealthInfoNet, Portland, ME, USA
pp. 853-855

Entropy chain multi-label classifiers for traditional medicine diagnosing Parkinson's disease (Abstract)

Yue Peng , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
Ming Fang , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
Chongjun Wang , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
Junyuan Xie , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
pp. 856-862

Risk prediction for future 6-month healthcare resource utilization in Maine (Abstract)

Shiying Hao , Departments of Surgery, Stanford University, CA, USA
Karl G. Sylvester , Departments of Surgery, Stanford University, CA, USA
Xuefeng B. Ling , Departments of Surgery, Stanford University, CA, USA
Andrew Young Shin , Departments of Pediatrics, Stanford University, CA, USA
Zhongkai Hu , HBISolutions Inc., Palo Alto, CA, USA
Bo Jin , HBISolutions Inc., Palo Alto, CA, USA
Chunqing Zhu , HBISolutions Inc., Palo Alto, CA, USA
Dorothy Dai , HBISolutions Inc., Palo Alto, CA, USA
Frank Stearns , HBISolutions Inc., Palo Alto, CA, USA
Eric Widen , HBISolutions Inc., Palo Alto, CA, USA
Devore S. Culver , HealthInfoNet, Portland, ME, USA
Shaun T. Alfreds , HealthInfoNet, Portland, ME, USA
Todd Rogow , HealthInfoNet, Portland, ME, USA
pp. 863-866

Predictive and preventive models for diabetes prevention using clinical information in electronic health record (Abstract)

Ni Cao , Inst. of Biopharmaceutical Informatics & Technologies, Wenzhou Medical University, Zhejiang, China
Sisi Zeng , Inst. of Biopharmaceutical Informatics & Technologies, Wenzhou Medical University, Zhejiang, China
Feixia Shen , The First Affiliated Hospital, Wenzhou Medical University, Zhejiang, China
Chuandi Pan , The First Affiliated Hospital, Wenzhou Medical University, Zhejiang, China
Chengshui Chen , The First Affiliated Hospital, Wenzhou Medical University, Zhejiang, China
Thanh Nguyen , Dept. of Computer and Information Science, Indiana University Purdue University Indianapolis, United States
Jake Chen , School of Informatics and Computing, Indiana University Purdue University Indianapolis, United States
pp. 867-874

S-fit: Knowledge guided fitness pattern mining framework (Abstract)

Ayush Sharma , Health - Services Division, Samsung R&D Institute India Bangalore Pvt. Ltd., India
Komal Agarwal , Health - Services Division, Samsung R&D Institute India Bangalore Pvt. Ltd., India
Rahul Dubey , Health - Services Division, Samsung R&D Institute India Bangalore Pvt. Ltd., India
Sandip Bhaumik , Health - Services Division, Samsung R&D Institute India Bangalore Pvt. Ltd., India
Samudrala Nagaraju , Health - Services Division, Samsung R&D Institute India Bangalore Pvt. Ltd., India
pp. 875-882

ILP based screening applied to predicting carbonic anhydrase II ligands (Abstract)

Tadasuke Ito , Faculty of Science and Technology, Tokyo University of Science Noda, Chiba, 278-8510 Japan
Masato Okada , Faculty of Science and Technology, Tokyo University of Science Noda, Chiba, 278-8510 Japan
Shotaro Togami , Faculty of Pharmaceutical Sciences, Tokyo University of Science Noda, Chiba, 278-8510 Japan
Shinya Ariyasu , Faculty of Pharmaceutical Sciences, Tokyo University of Science Noda, Chiba, 278-8510 Japan
Hayato Ohwada , Faculty of Science and Technology, Tokyo University of Science Noda, Chiba, 278-8510 Japan
pp. 883-888

Obtaining biomarkers in cancer progression from outliers of time-series clusters (Abstract)

Abed Alkhateeb , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Iman Rezaeian , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Siva Singireddy , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Luis Rueda , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
pp. 889-896

ccKOPLS: Confounder-correcting kernel-based orthogonal projections to latent structures (Abstract)

David E. Moore , Department of Computer Science, College of Charleston, SC 29464, USA
Kellan A. Fluette , Department of Computer Science, College of Charleston, SC 29464, USA
Heather J. Milne , Department of Biology, Reed College, Portland, OR 97202, USA
Andrew M. Shedlock , Department of Biology, College of Charleston, SC 29464, USA
Paul E. Anderson , Department of Computer Science, College of Charleston, SC 29464, USA
pp. 897-903

Feature selection and classification of speech under long-term stress (Abstract)

Bin Hu , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Zhenyu Liu , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Lihua Yan , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Tianyang Wang , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Fei Liu , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Xiaoyu Li , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
Huanyu Kang , Ubiquitous Awareness and Intelligent Solutions Lab, Lanzhou University, China
pp. 904-910

Simple objects tracking system for smart homes (Abstract)

Frederic Bergeron , DOMUS lab, Universite de Sherbrooke, Canada
Kevin Bouchard , DOMUS lab, Universite de Sherbrooke, Canada
Sylvain Giroux , DOMUS lab, Universite de Sherbrooke, Canada
Sebastien Gaboury , LIARA lab, Universite du Quebec a Chicoutimi, Canada
Bruno Bouchard , LIARA lab, Universite du Quebec a Chicoutimi, Canada
pp. 911-915

Generation of novel encrypted code using cryptography for multiple level data security for Electronic Patient Record (Abstract)

Mahua Bhattacharya , Indian Institute of Information, Technology & Management, Gwalior, India
Koushik Pal , Institute of Radio Physics and Electronics, University of Calcutta, India
Goutam Ghosh , Institute of Radio Physics and Electronics, University of Calcutta, India
Som Shuvra Mandal , Guru Nanak Institute of Technology, Dept of ECE, Calcutta, India
pp. 916-921

Annotating evidence-based argumentation in biomedical text (Abstract)

Nancy L. Green , University of North Carolina Greensboro, USA
pp. 922-929

Automatic identification of potentially contradictory claims to support systematic reviews (Abstract)

Abdulaziz Alamri , Department of Computer Science, The University of Sheffield, UK
Mark Stevensony , Department of Computer Science, The University of Sheffield, UK
pp. 930-937

Refining disease databases for clinical decision support systems (Abstract)

Takashi Okumura , National Institute of Public Health, Wako city, Japan
Demi Aleyssa Menez , Emilio Aguinaldo College, Manila, Philippines
Theekshana Abayawickrama , National Intensive Care Surveillance, Colombo, Sri Lanka
pp. 938-939

A prototype for a hybrid system to support systematic review teams: A case study of organ transplantation (Abstract)

Tanja Bekhuis , Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA
Eugene Tseytlin , Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA
Kevin J. Mitchell , Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA
pp. 940-947

A systems approach to reducing central line associated blood stream infections (Abstract)

Eva K Lee , Center for Operations Research in Medicine and HealthCare, NSF I/UCRC Center for Health Organization Transformation, Industrial and Systems Engineering, Georgia Institute of Technology, Atlanta, USA
Michael Callahan , Center for Operations Research in Medicine and HealthCare, NSF I/UCRC Center for Health Organization Transformation, Industrial and Systems Engineering, Georgia Institute of Technology, Atlanta, USA
Xin Wei , Center for Operations Research in Medicine and HealthCare, NSF I/UCRC Center for Health Organization Transformation, Industrial and Systems Engineering, Georgia Institute of Technology, Atlanta, USA
Prashant D Tailor , Center for Operations Research in Medicine and HealthCare, NSF I/UCRC Center for Health Organization Transformation, Industrial and Systems Engineering, Georgia Institute of Technology, Atlanta, USA
Alexander Quarshie , Morehouse School of Medicine; Grady Health System, Atlanta, USA
Michael Wright , Morehouse School of Medicine; Grady Health System, Atlanta, USA
pp. 948-955

Foreign object detection in chest X-rays (Abstract)

Zhiyun Xue , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
Sema Candemir , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
Sameer Antani , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
L. Rodney Long , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
Stefan Jaeger , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
Dina Demner-Fushman , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
George R. Thoma , Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, USA
pp. 956-961

Transcriptome analysis of HIV-1 virus in understanding the effect of antiretroviral drugs (cART) and methamphetamine on the virus (Abstract)

shwor Thapa , School of Interdisciplinary Informatics, College of IS&T, University of Nebraska Omaha, 68182, USA
oward S. Fox , Department of Pharmacology and Experimental Neuroscience, University of Nebraska Medical Center, Omaha, 68198, USA
hundy R. Bastola , School of Interdisciplinary Informatics, College of IS&T, University of Nebraska Omaha, 68182, USA
pp. 962-968

SOLOMON: An ontology for Sensory-Onset, Language-Onset and Motor-Onset dementias (Abstract)

Martin Skarzynski , Brain Health Alliance, Ladera Ranch, CA 92694 USA
Adam Craig , Brain Health Alliance, Ladera Ranch, CA 92694 USA
Carl Taswell , Brain Health Alliance, Ladera Ranch, CA 92694 USA
pp. 969-972

A distributional approach to summarization of radiology reports (Abstract)

Eamon Johnson , Department of Electrical Engineering and Computer Science, Case Western Reserve University, Cleveland, OH, USA
W. Christopher Baughman , Department of Radiology, MetroHealth Medical Center, Cleveland, OH, USA
Gultekin Ozsoyoglu , Department of Electrical Engineering and Computer Science, Case Western Reserve University, Cleveland, OH, USA
pp. 973-974

A semantic approach for knowledge capture of MIcroRNA-Target gene interactions (Abstract)

Jingshan Huang , School of Computing, University of South Alabama, Mobile, 36688, U.S.A.
Fernando Gutierrez , CIS Dept., University of Oregon, Eugene, 97403, U.S.A.
Dejing Dou , CIS Dept., University of Oregon, Eugene, 97403, U.S.A.
Judith A. Blake , The Jackson Laboratory, Bar Harbor, Maine 04609, U.S.A.
Karen Eilbeck , School of Medicine, University of Utah, Salt Lake City, 84112, U.S.A.
Darren A. Natale , Georgetown University Medical Center, Washington D.C. 20007, U.S.A.
Barry Smith , Dept. Philosophy, University at Buffalo, New York 14260, U.S.A.
Yu Lin , University of Miami, Florida 33146, U.S.A.
Xiaowei Wang , Washington University School of Medicine, St. Louis, Missouri 63110, U.S.A.
Zixing Liu , MCI, University of South Alabama, Mobile, 36604, U.S.A.
Ming Tan , MCI, University of South Alabama, Mobile, 36604, U.S.A.
Alan Ruttenberg , Dental Medicine, University at Buffalo, New York 14214, U.S.A.
pp. 975-982

Comparative utility of time and frequency HRV domains for automated classification of exercise exertion levels (Abstract)

In Cheol Jeong , Chronic Disease Informatics Program, Johns Hopkins University, Baltimore, USA
Joseph Finkelstein , Chronic Disease Informatics Program, Johns Hopkins University, Baltimore, USA
pp. 983-989

A novel automatic tongue image segmentation algorithm: Color enhancement method based on L*a*b* color space (Abstract)

Li Chen , Department of Electronic Engineering, Fudan University, No. 220, Handan Road, Shanghai, 200433, China
Dongyi Wang , Department of Electronic Engineering, Fudan University, No. 220, Handan Road, Shanghai, 200433, China
Yiqin Liu , Department of Electronic Engineering, Fudan University, No. 220, Handan Road, Shanghai, 200433, China
Xiaohang Gao , Department of Electronic Engineering, Fudan University, No. 220, Handan Road, Shanghai, 200433, China
Huiliang Shang , Department of Electronic Engineering, Fudan University, No. 220, Handan Road, Shanghai, 200433, China
pp. 990-993

Investigating gene expression array with outliers and missing data in bladder cancer (Abstract)

Stephane Chretien , Laboratoire de Mathématiques de Besançon, Université de Franche-Comté, 16, route de Gray, 25000, France
Christophe Guyeux , FEMTO-ST Institute, UMR 6174 CNRS, DISC Computer Science Department, Université de Franche-Comté, 16, route de Gray, 25000 Besançon, France
Michael Boyer-Guittaut , EA 3922/IFR133, Université de Franche-Comté, 16, route de Gray, 25000 Besançon, France
Regis Delage-Mouroux , EA 3922/IFR133, Université de Franche-Comté, 16, route de Gray, 25000 Besançon, France
Francoise Descotes , Service de Biochimie et Biologie Moléculaire Sud, Pavillon 3D, Centre Hospitalier Lyon Sud, Pierre Bénite Cedex 69495, France
pp. 994-998

Directed cyclic graph-based feature selection and modeling of the dampness syndrome of chronic gastritis (Abstract)

Guo-Ping Liu , Laboratory of Information Access and Synthesis of TCM Four Diagnosis, Basic Medical College, Shanghai University of Traditional Chinese Medicine, 201203, China
Jian-Jun Yan , Center for Mechatronics Engineering, East China University of Science and Technology, Shanghai 200237, China
pp. 999-1003

Finding Frequent Approximate Subgraphs in medical image database (Abstract)

Linlin Gao , College of Computer Science and Technology, Harbin Engineering University, 150001, China
Haiwei Pan , College of Computer Science and Technology, Harbin Engineering University, 150001, China
Qilong Han , College of Computer Science and Technology, Harbin Engineering University, 150001, China
Xiaoqin Xie , College of Computer Science and Technology, Harbin Engineering University, 150001, China
Zhiqiang Zhang , College of Computer Science and Technology, Harbin Engineering University, 150001, China
Xiao Zhai , College of Computer Science and Technology, Harbin Engineering University, 150001, China
Pengyuan Li , Department of Computer Science, University of Delaware, USA
pp. 1004-1007

Using aggregate taxonomies to summarize SNOMED CT evolution (Abstract)

Christopher Ochs , Department of Computer Science, New Jersey Institute of Technology, Newark, United States
Yehoshua Perl , Department of Computer Science, New Jersey Institute of Technology, Newark, United States
James Geller , Department of Computer Science, New Jersey Institute of Technology, Newark, United States
Mark Musen , Stanford School of Medicine, Stanford University, CA, United States
pp. 1008-1015

Assessment of gait patterns of chronic low back pain patients: A smart mobile phone based approach (Abstract)

Herman Chan , School of Computing and Mathematics, Ulster University, Jordanstown, Newtownabbey, Co.Antrim, BT37 0QB, UK
Huiru Zheng , Computer Science Research Institute, Ulster University, Jordanstown, Newtownabbey, Co.Antrim, BT37 0QB, UK
Haiying Wang , Computer Science Research Institute, Ulster University, Jordanstown, Newtownabbey, Co.Antrim, BT37 0QB, UK
Dave Newell , Anglo-European College of Chiropractic, Bournemouth, UK
pp. 1016-1023

Activity-driven exploration of chemical space with morphing (Abstract)

Martin Sicho , Laboratory of Informatics and Chemistry, University of Chemistry and Technology, Prague, Czech Republic
Daniel Svozil , Laboratory of Informatics and Chemistry, University of Chemistry and Technology, Prague, Czech Republic
David Hoksza , Faculty of Mathematics and Physics, Charles University in Prague, Czech Republic
pp. 1024-1031

Dealing with incompleteness in multidimensional analysis of health records: An experience on fetal growth (Abstract)

Mario A. Bochicchio , Set-Lab, Dept. of Innovation Engineering, University of Salento, Lecce, Italy
Lucia Vaira , Set-Lab, Dept. of Innovation Engineering, University of Salento, Lecce, Italy
Ettore Cicinelli , Department of Obstetrics and Gynecology, University of Bari, Italy
Antonella Vimercati , Department of Obstetrics and Gynecology, University of Bari, Italy
pp. 1032-1038

A path based approach to quantifying the progression of Alzheimer's disease (Abstract)

Prabesh Kanel , Department of Computer Science, Florida State University, Tallahassee, 32306, USA
Xiuwen Liu , Department of Computer Science, Florida State University, Tallahassee, 32306, USA
pp. 1039-1046

A systems chemical biology approach to identify targets of antibacterial agents: A case study of Chelerythrine and Rhein (Abstract)

Li-Da Zhu , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Chang-Shou He , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Ye-Mao Liu , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Yuan Quan , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Jing Chen , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Qiang Zhu , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Qing-Ye Zhang , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Hong-Yu Zhang , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
pp. 1047-1056

Acquisition of diabetes-related biological associations using a motif based network: Preliminary results (Abstract)

Iyanuoluwa Emmanuel Odebode , Department of Information Systems, University of Maryland Baltimore County, USA
Aryya Gangopadhyay , Department of Information Systems, University of Maryland Baltimore County, USA
Qian Zhu , Department of Information Systems, University of Maryland Baltimore County, USA
pp. 1057-1062

Collaborative data mining for clinical trial analytics (Abstract)

Jay Gholap , Information Systems, University of Maryland, Baltimore County, USA
Vandana P. Janeja , Information Systems, University of Maryland, Baltimore County, USA
Yelena Yesha , Computer Science and Electrical Engineering, University of Maryland, Baltimore County, USA
Raghu Chintalapati , Ekagra Software Technologies, USA
Harsh Marwaha , Ekagra Software Technologies, USA
Kunal Modi , Ekagra Software Technologies, USA
pp. 1063-1069

The syndromes of lung cancer and compatibility of medicine in Traditional Chinese Medicine science treatment based on Clustering Algorithm (Abstract)

Miao Wang , Research Lab for Construction and Application of Standards in Medical Informatics, Shanghai University of T.C.M., No. 1200, Cailun Road, 201210, China
Mengying Wang , Electrical Engineering Department, Fudan University, No.220, Handan Road, Shanghai, 200433 China
Dongyi Wang , Electrical Engineering Department, Fudan University, No.220, Handan Road, Shanghai, 200433 China
Shiyu Duan , Electrical Engineering Department, Fudan University, No.220, Handan Road, Shanghai, 200433 China
Yisheng Wang , Electrical Engineering Department, Fudan University, No.220, Handan Road, Shanghai, 200433 China
Yanjun Huang , Electrical Engineering Department, Fudan University, No.220, Handan Road, Shanghai, 200433 China
Huiliang Shang , Electrical Engineering Department, Fudan University, No.220, Handan Road, Shanghai, 200433 China
pp. 1070-1077

Resting state functional connectivity explains individual scores of multiple clinical measures for major depression (Abstract)

Kosuke Yoshida , Graduate School of Informatics, Kyoto University, 606-8501, Japan
Yu Shimizu , Okinawa Institute of Science and Technology Graduate University, 904-0495, Japan
Junichiro Yoshimoto , Okinawa Institute of Science and Technology Graduate University, 904-0495, Japan
Shigeru Toki , Department of Psychiatry and Neurosciences, Hiroshima University, 734-8551, Japan
Go Okada , Department of Psychiatry and Neurosciences, Hiroshima University, 734-8551, Japan
Masahiro Takamura , Department of Psychiatry and Neurosciences, Hiroshima University, 734-8551, Japan
Yasumasa Okamoto , Department of Psychiatry and Neurosciences, Hiroshima University, 734-8551, Japan
Shigeto Yamawaki , Department of Psychiatry and Neurosciences, Hiroshima University, 734-8551, Japan
Kenji Doya , Okinawa Institute of Science and Technology Graduate University, 904-0495, Japan
pp. 1078-1083

Parallel group ICA for multimodal biomedical data analyses (Abstract)

Jingyu Liu , Mind Research Network, Lovelace Biomedical and Environmental Research Institute, Albuquerque, NM, USA
Jiayu Chen , Mind Research Network, Lovelace Biomedical and Environmental Research Institute, Albuquerque, NM, USA
Vince D. Calhoun , Mind Research Network, Lovelace Biomedical and Environmental Research Institute, Albuquerque, NM, USA
pp. 1084-1091

BmQGen: Biomedical query generator for knowledge discovery (Abstract)

Feichen Shen , CSEE Department, University of Missouri - Kansas City, USA
Hongfang Liu , Department of Health Sciences Research, Mayo Clinic College of Medicine, USA
Sunghwan Sohn , Department of Health Sciences Research, Mayo Clinic College of Medicine, USA
David W Larson , Department of Surgery, Mayo Clinic College of Medicine, USA
Yugyung Lee , CSEE Department, University of Missouri - Kansas City, USA
pp. 1092-1097

Finding function in the unknown (Abstract)

Kelly Boyd , Department of Biology, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
Emma Highland , Department of Biology, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
Amanda Misch , Department of Biology, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
Amber Hu , Stevenson High School, Lincolnshire, IL 60069, USA
Sushma Reddy , Department of Biology, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
Catherine Putonti , Departments of Biology and Computer Science, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
pp. 1098-1099

HAsh-MaP-ERadicator: Filtering non-target sequences from next generation sequencing reads (Abstract)

Jonathon Brenner , Department of Computer Science, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
Catherine Putonti , Departments of Biology and Computer Science, Bioinformatics Program, Loyola University Chicago, IL 60660, USA
pp. 1100-1101

Next generation sequence assembler mis-assembly of phage genomes with terminal redundancy (Abstract)

Julia Warnke-Sommer , Department of Computer Science, University of Nebraska Omaha, Department of Pathology and Microbiology, University of Nebraska Medical Center, USA
Ishwor Thapa , Department of Computer Science, University of Nebraska Omaha, Department of Pathology and Microbiology, University of Nebraska Medical Center, USA
Hesham Ali , Department of Computer Science, University of Nebraska Omaha, Department of Pathology and Microbiology, University of Nebraska Medical Center, USA
pp. 1102-1108

A computational framework for integrative analysis of large microbial genomics data (Abstract)

Erliang Zeng , Department of Biology, Department of Computer Science, University of South Dakota, Vermillion, 57069, USA
Wei Zhang , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
Scott Emrich , Department of Computer Science and Engineering, University of Notre Dame, IN 46556, USA
Dan Liu , Department of Biological Science, University of Notre Dame, IN 46556, USA
Josh Livermore , Department of Biological Science, University of Notre Dame, IN 46556, USA
Stuart Jones , Department of Biological Science, University of Notre Dame, IN 46556, USA
pp. 1109-1116

CoCo: An application to store High-Throughput Sequencing data in compact text and binary file formats (Abstract)

Kamil Khanipov , Department of Pharmacology & Toxicology, University of Texas Medical Branch, Galveston, 77555, USA
Georgiy Golovko , Department of Pharmacology & Toxicology, University of Texas Medical Branch, Galveston, 77555, USA
Mark Rojas , Department of Pharmacology & Toxicology, University of Texas Medical Branch, Galveston, 77555, USA
Levent Albayrak , Department of Pharmacology & Toxicology, University of Texas Medical Branch, Galveston, 77555, USA
Otto Dobretsberger , Department of Computer Science, University of Houston, TX, 77004, USA
Maria Pimenova , Department of Pharmacology & Toxicology, University of Texas Medical Branch, Galveston, 77555, USA
Nels Olson , Nels A. Olson, Seattle, WA, 98116, USA
Sergei Chumakov , Department of Physics, University of Guadalajara, Jalisco, Mexico
Yuriy Fofanov , Department of Pharmacology & Toxicology, University of Texas Medical Branch, Galveston, 77555, USA
pp. 1117-1122

Bipartite graphs for metagenomic data analysis and visualization (Abstract)

Karel Sedlar , Department of Biomedical Engineering, Brno University of Technology, Czech Republic
Helena Skutkova , Department of Biomedical Engineering, Brno University of Technology, Czech Republic
Petra Videnska , Veterinary Research Institute, Brno, Czech Republic
Ivan Rychlik , Veterinary Research Institute, Brno, Czech Republic
Ivo Provaznik , Department of Biomedical Engineering, Brno University of Technology, Czech Republic
pp. 1123-1128

Novel Isoniazid- and Ethionamide-resistance loci in mycobacterium tuberculosis identified by phenome-wide association scans (Abstract)

Zhi-Hua Pei , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Ting Xie , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Qing-Yong Yang , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Qing-Ye Zhang , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
Hong-Yu Zhang , Agricultural Bioinformatics Key Laboratory of Hubei Province, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China
pp. 1129-1132

Relation dictionary construction and rule learning for PPI extraction from biomedical literatures (Abstract)

Xiyue Guo , National Engineering Research Center for E-learning, Central China Normal University, Wuhan, China
Tingting He , School of Computer, Central China Normal University, Wuhan, China
Jie Yuan , School of Computer, Central China Normal University, Wuhan, China
pp. 1133-1140

Essential protein discovery based on network node correlation and invalidating protein node (Abstract)

Wenjie Hu , College of Information Engineering, Xianning Vocational Technical College, China
Xianjun Shen , School of Computer, Central China Normal University, Wuhan, China
Rui Xu , College of Information Engineering, Henan Institute of Science and Technology, Xinxiang, China
pp. 1141-1147

Patho-finder ? A fast and accurate program for pathogen identification through RNA-seq (Abstract)

Chin-Ting Wu , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
Tzu-Hung Hsiao , Department of Medical Research, Taichung Veterans General Hospital, Taiwan
Yu-Chiao Chiu , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
Yu-Ching Hsu , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
Eric Y. Chuang , Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
Yidong Chen , Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, USA
pp. 1148-1151

Uncover protein complexes in E.coli network (Abstract)

Wei Liu , Department of Automation, Shanghai Jiao Tong University, China
Aiping Wu , Center for Systems Medicine, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union, Medical College, Beijing, China
pp. 1152-1155

Deep neural network based protein-protein interaction extraction from biomedical literature (Abstract)

Zhehuan Zhao , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Zhihao Yang , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Ling Luo , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Hongfei Lin , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Jian Wang , College of Computer Science and Technology, Dalian University of Technology, 116024, China
Song Gao , Department of pharmacy, First Affiliated Hospital of Dalian Medical University, 116023, China
pp. 1156

A new DP algorithm for comparing gene expression data using geometric similarity (Abstract)

Amir Vajdi , Department of Computer Science, University of Massachusetts Boston, USA 02125
Nurit Haspel , Department of Computer Science, University of Massachusetts Boston, USA 02125
Hadi Banaee , Center for Applied Autonomous Sensor Systems (AASS), 701 82 Örebro University, Sweden
pp. 1157-1161

Prediction of hot regions in protein-protein interaction by density-based incremental clustering with parameter selection (Abstract)

Jing Hu , School of Computer Science and Technology, Wuhan University of Science and Technology, China
Xiaolong Zhang , School of Computer Science and Technology, Wuhan University of Science and Technology, China
pp. 1162-1169

Frequency domain discovery of gene regulatory networks (Abstract)

Somaie Yazdani , Department of Electrical Engineering, Ferdowsi University of Mashhad, Iran
Ghosheh Abed Hodtani , Department of Electrical Engineering, Ferdowsi University of Mashhad, Iran
pp. 1170-1176

Predicting disease genes based on normalized protein modules and phenotype ontology (Abstract)

Jie Yuan , School of Computer, Central China Normal University, Wuhan, China
Xingpeng Jiang , School of Computer, Central China Normal University, Wuhan, China
Tingting He , School of Computer, Central China Normal University, Wuhan, China
Yan Wang , National Engineering Research Center for E-learning, Central China Normal University, Wuhan, China
Xiyue Guo , National Engineering Research Center for E-learning, Central China Normal University, Wuhan, China
pp. 1177-1183

A novel signature for identification of upstream alternative translation initiation sites (Abstract)

Kritika Karri , College of Information Science and Technology, University of Nebraska at Omaha, USA
Dhundy R Bastola , College of Information Science and Technology, University of Nebraska at Omaha, USA
pp. 1184-1191

Understanding heterogeneity in pregnancy-associated breast cancer (Abstract)

T. Murlidharan Nair , Department of Biological Sciences and Computer Science/Informatics, Indiana University South Bend, 1700 Mishawaka Ave, 46634 USA
pp. 1192-1196

On the comparison of state- and transition-based analysis of biological relevance in gene co-expression networks (Abstract)

Kathryn Cooper , College of Information Science and Technology, University of Nebraska at Omaha, USA
Prasuna Vemuri , College of Information Science and Technology, University of Nebraska at Omaha, USA
Hesham Ali , College of Information Science and Technology, University of Nebraska at Omaha, USA
pp. 1197-1203

Functional connectivity of Chinese characters processing: A meta-analysis (Abstract)

Yaoxin Nie , School of Computer Science and Technology, Beijing Institute of Technology, China
Jieyao Wei , School of Computer Science and Technology, Beijing Institute of Technology, China
Linlin Zhu , School of Computer Science and Technology, Beijing Institute of Technology, China
Qian Zhou , School of Computer Science and Technology, Beijing Institute of Technology, China
Zhendong Niu , School of Computer Science and Technology, Beijing Institute of Technology, China
pp. 1204-1208

Visualizing the topology and re-analyzing the causes of small-world property of amino acid network (Abstract)

Yongpan Hua , College of Computer Science, Sichuan University, Chengdu, 610000 China
Xiuchan Xiao , College of Computer Science, Sichuan University, Chengdu, 610000 China
Min Zhu , College of Computer Science, Sichuan University, Chengdu, 610000 China
Yangxu Wang , College of Computer Science, Sichuan University, Chengdu, 610000 China
Menglong Li , College of Chemistry, Sichuan University, Chengdu, 610000 China
pp. 1209-1215

Network signatures based on gene pair expression ratios improve classification and the analysis of muscle-invasive urothelial cancer (Abstract)

Ricardo de Matos Simoes , Center for Cancer Research and Cell Biology, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, 97 Lisburn Road, BT9 7BL, UK
Constantine Mitsiades , Center for Cancer Research and Cell Biology, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, 97 Lisburn Road, BT9 7BL, UK
Kate E Williamson , Dana-Farber Cancer Institute, Harvard Medical School, 440 Brookline Avenue, Boston, MA 02215, USA
Frank Emmert-Streib , Tampere University of Technology, Korkeakoulunkatu 1, FI-33720, Finland
pp. 1216-1223

Cross-validation of data in SAXS and cryo-EM (Abstract)

Bijan Afsari , Center for Imaging Science, Johns Hopkins University, Baltimore, Maryland 21218, USA
Jin Seob Kim , Department of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, USA
Gregory S. Chirikjian , Department of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, USA
pp. 1224-1230

Designing rotamer libraries based on pairs of consecutive residues: A preliminary analysis (Abstract)

Sara E. Hernandez-Ayon , Facultad de Ciencias, Universidad Autónoma de Baja, California, Ensenada, B.C., México
Carlos A. Brizuela , Computer Sciences Department, CICESE Research Center, Ensenada, B.C., México
pp. 1231-1238

Predicting protein-ligand binding specificity based on ensemble clustering (Abstract)

Ziyi Guo , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
Brian Y. Chen , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
pp. 1239-1245

A statistical model of electrostatic isopotential variation in serine protease binding cavities (Abstract)

Rachel Y. Okun , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
Brian Y. Chen , Dept. of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA
pp. 1246-1252

Comparison of an atomic model and its cryo-EM image at the central axis of a helix (Abstract)

Jing He , Department of Computer Science, Old Dominion University, Norfolk, VA, 23529, USA
Stephanie Zeil , Department of Computer Science, Old Dominion University, Norfolk, VA, 23529, USA
Hussam Hallak , Department of Computer Science, Old Dominion University, Norfolk, VA, 23529, USA
Kele McKaig , Department of Computer Science, Old Dominion University, Norfolk, VA, 23529, USA
Julio Kovacs , Department of Mechanical & Aerospace Engineering, Old Dominion University, Norfolk, VA, 23529, USA
Willy Wriggers , Department of Mechanical & Aerospace Engineering, Old Dominion University, Norfolk, VA, 23529, USA
pp. 1253-1259

Malphite: A convolutional neural network and ensemble learning based protein secondary structure predictor (Abstract)

Yang Li , Department of Computer Science, Graduate School of Information Science and Technology, University of Tokyo, Japan
Tetsuo Shibuya , Human Genome Center, Institute of Medical Science, University of Tokyo, Japan
pp. 1260-1266

Mining graph patterns in the protein-RNA interfaces (Abstract)

Wen Cheng , Department of Computer Science, North Dakota State University, Fargo, USA 58106
Changhui Yan , Department of Computer Science, North Dakota State University, Fargo, USA 58106
pp. 1267-1271

Improving protein conformational sampling by using guiding projections (Abstract)

Anastasia Novinskaya , Department of Computer Science, Rice University, Houston, Texas, USA 77005
Didier Devaurs , Department of Computer Science, Rice University, Houston, Texas, USA 77005
Mark Moll , Department of Computer Science, Rice University, Houston, Texas, USA 77005
Lydia E. Kavraki , Department of Computer Science, Rice University, Houston, Texas, USA 77005
pp. 1272-1279

Flexible protein structure alignment by variable-length Aligned Fragment Pairs (Abstract)

Hu Cao , School of Information Science and Engineering, Lanzhou University, China, 730000
Yonggang Lu , School of Information Science and Engineering, Lanzhou University, China, 730000
pp. 1280-1286

Predicting diverse M-best protein contact maps (Abstract)

Siqi Sun , Toyota Technological Institute at Chicago, IL, USA, 60637
Jianzhu Ma , Toyota Technological Institute at Chicago, IL, USA, 60637
Sheng Wang , Toyota Technological Institute at Chicago, IL, USA, 60637
Jinbo Xu , Toyota Technological Institute at Chicago, IL, USA, 60637
pp. 1287-1295

Accurate prediction of docked protein structure similarity using neural networks and restricted Boltzmann machines (Abstract)

Roshanak Farhoodi , Department of Computer Science, University of Massachusetts Boston, USA 02125
Bahar Akbal-Delibas , Department of Computer Science, University of Massachusetts Boston, USA 02125
Nurit Haspel , Department of Computer Science, University of Massachusetts Boston, USA 02125
pp. 1296-1303

A multi-stage protein secondary structure prediction system using machine learning and information theory (Abstract)

Masood Zamani , School of Computer Science, University of Guelph, Canada
Stefan C. Kremer , School of Computer Science, University of Guelph, Canada
pp. 1304-1309

Probabilistic visual search for masses within mammography images using deep learning (Abstract)

Mehmet Gunhan Ertosun , Department of Radiology, Stanford School of Medicine, CA USA
Daniel L. Rubin , Departments of Radiology and Medicine (Biomedical Informatics), Stanford School of Medicine, CA USA
pp. 1310-1315

Deep learning of tissue fate features in acute ischemic stroke (Abstract)

Noah Stier , Neurovascular Imaging Research Core, Department of Neurology, Univerisity of California, Los Angeles (UCLA), USA
Nicholas Vincent , Neurovascular Imaging Research Core, Department of Neurology, Univerisity of California, Los Angeles (UCLA), USA
David Liebeskind , Neurovascular Imaging Research Core, Department of Neurology, Univerisity of California, Los Angeles (UCLA), USA
Fabien Scalzo , Neurovascular Imaging Research Core, Department of Neurology, Univerisity of California, Los Angeles (UCLA), USA
pp. 1316-1321

Detection of hyperperfusion on arterial spin labeling using deep learning (Abstract)

Nicholas Vincent , Neurovascular Imaging Research Core, Department of Neurology, University of California, Los Angeles (UCLA), USA
Noah Stier , Neurovascular Imaging Research Core, Department of Neurology, University of California, Los Angeles (UCLA), USA
Songlin Yu , Neurovascular Imaging Research Core, Department of Neurology, University of California, Los Angeles (UCLA), USA
David S. Liebeskind , Neurovascular Imaging Research Core, Department of Neurology, University of California, Los Angeles (UCLA), USA
Danny JJ Wang , Neurovascular Imaging Research Core, Department of Neurology, University of California, Los Angeles (UCLA), USA
Fabien Scalzo , Neurovascular Imaging Research Core, Department of Neurology, University of California, Los Angeles (UCLA), USA
pp. 1322-1327

Learning structure in gene expression data using deep architectures, with an application to gene clustering (Abstract)

Aman Gupta , Language Technologies Institute, School of Computer Science, Carnegie Mellon University, Pittsburgh, USA
Haohan Wang , Language Technologies Institute, School of Computer Science, Carnegie Mellon University, Pittsburgh, USA
Madhavi Ganapathiraju , Department of Biomedical Informatics, University of Pittsburgh, USA
pp. 1328-1335

Tiled regression reduces type I error rates in tests of association of rare single nucleotide variants with non-normally distributed traits, compared with simple linear regression (Abstract)

Heejong Sung , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
Alexa J. M. Sorant , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
Jeremy A. Sabourin , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
Tae-Hwi Schwantes-An , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
Cristina M. Justice , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
Joan E. Bailey-Wilson , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
Alexander F. Wilson , Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore MD, USA
pp. 1336-1340

Multi-purpose SNP Selection by the principal variables for a genetic study (Abstract)

Seunghyun Lee , Data analysis team, NEXON Korea Corporation, Seoul, Republic of Korea
Mira Park , Department of Preventive Medicine, Eulji University, Daejon, Republic of Korea
pp. 1341-1344

Developing cancer prediction model based on stepwise selection by AUC measure for proteomics data (Abstract)

Yongkang Kim , Department of Statistics, Seoul National University, Korea
Seungyeoun Lee , Department of Mathematics and Statistics, Sejong University, Seoul, Korea
Min-Seok Kwon , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
Ahrum Na , Department of Statistics, Sookmyung Women's University Seoul, Korea
Yonghwan Choi , Bioinformatics Tech. Lab, Healthcare group, SK telecom, Seoul, Korea
Sung Gon Yi , Bioinformatics Tech. Lab, Healthcare group, SK telecom, Seoul, Korea
Junghyun Namkung , Bioinformatics Tech. Lab, Healthcare group, SK telecom, Seoul, Korea
Sangjo Han , Bioinformatics Tech. Lab, Healthcare group, SK telecom, Seoul, Korea
Meejoo Kang , Department of Surgery, Seoul National University Hospital, Korea
Sun Whe Kim , Department of Surgery, Seoul National University Hospital, Korea
Jin-Young Jang , Department of Surgery, Seoul National University Hospital, Korea
Yikwon Kim , Department of Biomedical Engineering, Seoul National University, Korea
Youngsoo Kim , Department of Biomedical Engineering, Seoul National University, Korea
Taesung Park , Department of Statistics, Seoul National University, Korea
pp. 1345-1350

Competitive pathway analysis using Structural Equation Models (CPA-SEM) for gene expression data (Abstract)

Sungkyoung Choi , Interdisciplinary Program in Bioinformatics, Seoul National University, Korea
Sungyoung Lee , Interdisciplinary Program in Bioinformatics, Seoul National University, Korea
Iksoo Huh , Department of Statistics, Seoul National University, Korea
Heungsun Hwang , Department of Psychology, McGill University, Montreal, Canada
Taesung Park , Interdisciplinary Program in Bioinformatics, Seoul National University, Korea
pp. 1351-1358

Genetic association tests for cigarattes per day (Abstract)

Haewon Choi , Department of Statistics, Seoul National University, South Korea
Hye-Young Jung , Department of Statistics, Seoul National University, South Korea
Taesung Park , Department of Statistics, Seoul National University, South Korea
pp. 1359-1362

VizEpis : A visualization and mapping tool for interpreting epistasis (Abstract)

Min-Seok Kwon , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
Sungyoung Lee , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
Yongkang Kim , Department of Statistics, Seoul National University, Korea
Taesung Park , Interdisciplinary program in Bioinformatics, Seoul National University, Korea
pp. 1363-1366

Cross-validation and cross-study validation of chronic lymphocytic leukemia with exome sequences and machine learning (Abstract)

Nihir Patel , Department of Genetics and Genomics Sciences, Icahn School of Medicine at Mount Sinai Hospital, Hess Center for Science and Medicine, New York City, 10029, USA
Bharati Jhadav , Department of Genetics and Genomics Sciences, Icahn School of Medicine at Mount Sinai Hospital, Hess Center for Science and Medicine, New York City, 10029, USA
Abdulrhman Aljouie , Department of Computer Science, New Jersey Institute of Technology, Newark, 07102, USA
Usman Roshan , Department of Computer Science, New Jersey Institute of Technology, Newark, 07102, USA
pp. 1367-1374

Electronic Health Record: A review (Abstract)

Manuel Grana , ENGINE centre, Wroclaw Technological University, Poland
Konrad Jackwoski , ENGINE centre, Wroclaw Technological University, Poland
pp. 1375-1382

Tensor based representation and analysis of the electronic healthcare record data (Abstract)

Boguslaw Cyganek , Wroclaw University of Technology, Wybr?eze Wyspia?skiego 27, 50-370, Poland
Michal Wozniak , Wroclaw University of Technology, Wybr?eze Wyspia?skiego 27, 50-370, Poland
pp. 1383-1390

Selected aspects of electronic health record analysis from the big data perspective (Abstract)

Boguslaw Cyganek , ENGINE Center, Wroclaw University of Technology, Poland
Manuel Grana , ENGINE Center, Wroclaw University of Technology, Poland
Andrzej Kasprzak , Department of Systems and Computer Networks, Wroclaw University of Technology, Poland
Krzysztof Walkowiak , ENGINE Center, Wroclaw University of Technology, Poland
Michal Wozniak , ENGINE Center, Wroclaw University of Technology, Poland
pp. 1391-1396

Interesting things for computer systems to do: Keeping and data mining millions of patient records, guiding patients and physicians, and passing medical licensing exams (Abstract)

Barry Robson , Ingine Inc. Delaware, and The Dirac Foundation clg, Oxfordshire, UK
Srinidhi Boray , Ingine Inc. Delaware, and The Dirac Foundation clg, Oxfordshire, UK
pp. 1397-1403

An LDA and probability-based classifier for the diagnosis of Alzheimer's Disease from structural MRI (Abstract)

Alexander Luke Spedding , School of Systems Engineering, University of Reading, UK
Giuseppe Di Fatta , School of Systems Engineering, University of Reading, UK
James Douglas Saddy , Centre for Integrative Neuroscience & Neurodynamics, University of Reading, UK
pp. 1404-1411

Towards an efficient data assimilation in physically-based medical simulations (Abstract)

Igor Peterlik , Institute of Computer Science, Masaryk University, Czech Republic
Antonin Klima , Faculty of Informatics, Masaryk University, Czech Republic
pp. 1412-1419

Time series discord detection in medical data using a parallel relational database (Abstract)

Diane Myung-kyung Woodbridge , Sandia National Laboratories, Albuquerque, New Mexico, United States
Andrew T. Wilson , Sandia National Laboratories, Albuquerque, New Mexico, United States
Mark D. Rintoul , Sandia National Laboratories, Albuquerque, New Mexico, United States
Richard H. Goldstein , RGI Informatics, Boston, MA, United States
pp. 1420-1426

Overall Survival Analyzer: A software tool to analyze genotyping and clinical data enriched with temporal events (Abstract)

G. Agapito , Department of Medical and Surgical Science, University Magna Græcia of Catanzaro, Italy
P.H. Guzzi , Department of Medical and Surgical Science, University Magna Græcia of Catanzaro, Italy
C. Botta , Department of Experimental and Clinical Medicine, University Magna Græcia of Catanzaro, Italy
M. Arbitrio , CNR-ISN-UOS of Pharmacology, Roccelletta di Borgia, Catanzaro, Italy
P. Tassone , Department of Experimental and Clinical Medicine, University Magna Græcia of Catanzaro, Italy
P. Tagliaferri , Department of Experimental and Clinical Medicine, University Magna Græcia of Catanzaro, Italy
M. Cannataro , Department of Medical and Surgical Science, University Magna Græcia of Catanzaro, Italy
pp. 1427-1433

Conservation in mitochondrial DNA: Parallelized estimation and alignment influence (Abstract)

Francisco Merino-Casallo , Dept. de Informática e Ingeniería de Sistemas (DIIS) & Instituto de Investigación en Ingeniería de Aragón (I3A), Universidad de Zaragoza, María de Luna 1, 50018, Spain
Jorge Alvarez-Jarreta , Dept. de Informática e Ingeniería de Sistemas (DIIS) & Instituto de Investigación en Ingeniería de Aragón (I3A), Universidad de Zaragoza, María de Luna 1, 50018, Spain
Elvira Mayordomo , Dept. de Informática e Ingeniería de Sistemas (DIIS) & Instituto de Investigación en Ingeniería de Aragón (I3A), Universidad de Zaragoza, María de Luna 1, 50018, Spain
pp. 1434-1440

High performance computing of a fusion gene detection pipeline on the K computer (Abstract)

Satoshi Ito , Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, 108-8639, Japan
Yuichi Shiraishi , Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, 108-8639, Japan
Teppei Shimamura , Division of Systems Biology, Nagoya University Graduate School of Medicine, 466-8550, Japan
Ken-ichi Chiba , Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, 108-8639, Japan
Satoru Miyano , Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, 108-8639, Japan
pp. 1441-1447

Ancestral reconstruction under weighted maximum matching (Abstract)

Lingxi Zhou , Department of Computer Science and Engineering, University of South Carolina, Columbia, USA, 29201
William Hoskins , Department of Computer Science and Engineering, University of South Carolina, Columbia, USA, 29201
Jieyi Zhao , The University of Texas Health Science Center at Houston, USA, 77030
Jijun Tang , Department of Computer Science and Engineering, University of South Carolina, Columbia, USA, 29201
pp. 1448-1455

NGS read data compression using parallel computing algorithm (Abstract)

Biji C.L. , Dept. of Computational Biology and Bioinformatics, University of Kerala, Thiruvananthapuram, Pin-695581, India
Achuthsankar S. Nair , Dept. of Computational Biology and Bioinformatics, University of Kerala, Thiruvananthapuram, Pin-695581, India
Arun P.R , School Of Computer Sciences, Mahatma Gandhi University, Kottayam, Kerala, Pin-686560, India
Jojo George , School Of Computer Sciences, Mahatma Gandhi University, Kottayam, Kerala, Pin-686560, India
pp. 1456-1460

Parallel merging method to integrate different genome assemblies (Abstract)

Kirill Romanenkov , Faculty of Computational Mathematics and Cybernetics, Lomonosov Moscow State University, Russia
pp. 1461-1464

FPGA acceleration of the pair-HMMs forward algorithm for DNA sequence analysis (Abstract)

Shanshan Ren , Computer Engineering Lab, Delft University of Technology, 2628 CD, The Netherlands
Vlad-Mihai Sima , Computer Engineering Lab, Delft University of Technology, 2628 CD, The Netherlands
Zaid Al-Ars , Computer Engineering Lab, Delft University of Technology, 2628 CD, The Netherlands
pp. 1465-1470

Cluster-based Apache Spark implementation of the GATK DNA analysis pipeline (Abstract)

Hamid Mushtaq , Computer Engineering Laboratory, Delft University of Technology, The Netherlands
Zaid Al-Ars , Computer Engineering Laboratory, Delft University of Technology, The Netherlands
pp. 1471-1477

Hybrid multi-threaded simulation of agent-based pandemic modeling using multiple GPUs (Abstract)

Barzan Shekh , College of Eng. and Applied Sciences, Western Michigan University, Kalamazoo, 49008-5466, United States
Elise de Doncker , College of Eng. and Applied Sciences, Western Michigan University, Kalamazoo, 49008-5466, United States
Diana Prieto , College of Eng. and Applied Sciences, Western Michigan University, Kalamazoo, 49008-5466, United States
pp. 1478-1485

Usability testing of a novel automated external defibrillator user interface: A pilot study (Abstract)

Raymond Bond , Computer Science Research Institute, University of Ulster, Newtownabbey, Northern Ireland
Peter O'Hare , Clinical Engineering Research Group, Heartsine Technologies Ltd, Belfast, Northern Ireland
Rebecca Di Maio , Clinical Engineering Research Group, Heartsine Technologies Ltd, Belfast, Northern Ireland
pp. 1486-1488

Outlier detection in weight time series of connected scales (Abstract)

Saeed Mehrang , Signal Processing Department, Tampere University of Technology, Finland
Elina Helander , Signal Processing Department, Tampere University of Technology, Finland
Misha Pavel , College of Computer and Information Science and Bouve College of Health Sciences, Northeastern University, Boston, Massachusetts, USA
Angela Chieh , Data and Studies Department at Withings, Paris, France
Ilkka Korhonen , Signal Processing Department, Tampere University of Technology, Finland
pp. 1489-1496

Thermal sensor based multi-occupancy motion tracking and visualisation in smart environments (Abstract)

Jun Zhou , School of Computing and Mathematics, Ulster University, Co. Antrim, United Kingdom, BT37 0QB
Huiru Zheng , School of Computing and Mathematics, Ulster University, Co. Antrim, United Kingdom, BT37 0QB
Haiying Wang , School of Computing and Mathematics, Ulster University, Co. Antrim, United Kingdom, BT37 0QB
Jonathan Synnott , School of Computing and Mathematics, Ulster University, Co. Antrim, United Kingdom, BT37 0QB
Chris Nugent , School of Computing and Mathematics, Ulster University, Co. Antrim, United Kingdom, BT37 0QB
Paul Jeffers , IoT Tech Ltd., Lisburn, Co. Antrim, United Kingdom, BT28 2SA
pp. 1497-1502

Innovative approach for porting existing CPU program to its CUDA program (Abstract)

Yu Liu , School of Electronic Information Engineering, Tianjin University, 300072, China
Yang Hong , School of Electronic Information Engineering, Tianjin University, 300072, China
Chung-Hung Wang , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Sheng-Ta Lee , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Chun-Yuan Lin , Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan, Taiwan 33302
Che-Lun Hung , Department of Computer Science and Communication Engineering, Providence University, Taichung 43301, Taiwan
pp. 1503-1508

Cloud computing service framework for bioinformatics tools (Abstract)

Guan-Jie Hua , Dept. Computer Science, National Tsing Hua University, Hsinchu, Taiwan
Chuan Yi Tang , Dept. Computer Science, National Tsing Hua University, Hsinchu, Taiwan
Che-Lun Hung , Dept. Computer Science and Communication Engineering, Providence University, Taichung, Taiwan
Yaw-Ling Lin , Dept. Computer Science and Information Engineering, Providence University, Taichung, Taiwan
pp. 1509-1513

Biomarker discovery, high performance and cloud computing: A comprehensive review (Abstract)

Jaine Blayney , School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, BT7 1NN, United Kingdom
Valeriia Haberland , Tungsten Centre for Intelligent Data Analytics, Goldsmiths, University of London, SE14 6NW, United Kingdom
Gaye Lightbody , School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, BT7 1NN, United Kingdom
Fiona Browne , School of Computing and Mathematics, Ulster University, Londonderry BT52 1SA, United Kingdom
pp. 1514-1519

Combining AR filter and sparse Wavelet representation for P300 speller (Abstract)

Zhihua Huang , College of Mathematics and Computer Science, Fuzhou University, China
Huiru Zheng , School of Computing and Mathematics, Ulster University, Belfast, United Kingdom
pp. 1520-1524

A study of genomic data provenance in NoSQL document-oriented database systems (Abstract)

Valeria Guimaraes , Department of Computer Science, University of Brasília, Brazil
Fernanda Hondo , Department of Computer Science, University of Brasília, Brazil
Rodrigo Almeida , Department of Computer Science, University of Brasília, Brazil
Harley Vera , Department of Computer Science, University of Brasília, Brazil
Maristela Holanda , Department of Computer Science, University of Brasília, Brazil
Aleteia Araujo , Department of Computer Science, University of Brasília, Brazil
Maria Emilia Walter , Department of Computer Science, University of Brasília, Brazil
Sergio Lifschitz , Pontifical Catholic University of Rio de Janeiro, Department of Informatics, Brazil
pp. 1525-1531

The upregulation of Myb and Peg3 may mediate EGCG inhibition effect on mouse lung adenocarcinoma (Abstract)

Hong Zhou , Department of Mathematical Sciences, School of Health and Natural Sciences, University of Saint Joseph, West Hartford, CT 06117, USA
Joseph Manthey , Department of Mathematical Sciences, School of Health and Natural Sciences, University of Saint Joseph, West Hartford, CT 06117, USA
Ekaterina Lioutikova , Department of Mathematical Sciences, School of Health and Natural Sciences, University of Saint Joseph, West Hartford, CT 06117, USA
Mary Qu Yang , Middle South Bioinformatics Center and Joint Bioinformatics Ph.D. Program, George Washington Donaghey College of Engineering and Information Technology, University of Arkansas at Little Rock and University of Arkansas for Medical Sciences, 2801 S. University Avenue, 72204 U.S.A
William Yang , Department of Computer Science, George Washington Donaghey College of Engineering and Information Technology, University of Arkansas at Little Rock and University of Arkansas for Medical Sciences, 2801 S. University Avenue, 72204 U.S.A
Kenji Yoshigoe , Department of Computer Science, George Washington Donaghey College of Engineering and Information Technology, University of Arkansas at Little Rock and University of Arkansas for Medical Sciences, 2801 S. University Avenue, 72204 U.S.A
Hong Wang , Susan L. Cullman Laboratory for Cancer Research, Department of Chemical Biology and Center for Cancer Prevention Research, Ernest Mario School of Pharmacy, Rutgers, The State University of New Jersey, 08854, USA
pp. 1532-1535

Sketching the distribution of transcriptomic features on RNA transcripts with Travis coordinates (Abstract)

Xiaodong Cui , Department of Electrical and Computer Engineering, University of Texas at San, San Antonio, 78230, USA
Zhen Wei , Department of Biological Sciences, XJTLU-Huai'an Research Institute of New-type Urbanization, Xi'an Jiaotong-Liverpool University, Suzhou, Jiangsu 215123, China
Lin Zhang , School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, 221116, China
Hui Liu , School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, 221116, China
Lei Sun , School of Information Engineering, Yangzhou University, Jiangsu 225127, China
Shao-Wu Zhang , Key Laboratory of Information Fusion Technology of Ministry of Education, School of Automation, Northwestern Polytechnical University, Xi'an, Shaanxi, 710027, China
Yufei Huang , Department of Electrical and Computer Engineering, University of Texas at San, San Antonio, 78230, USA
Jia Meng , Department of Biological Sciences, XJTLU-Huai'an Research Institute of New-type Urbanization, Xi'an Jiaotong-Liverpool, University, Suzhou, Jiangsu 215123, China
pp. 1536-1542

Integrating prior biological knowledge and graphical LASSO for network inference (Abstract)

Yiming Zuo , Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, USA
Guoqiang Yu , Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, USA
Habtom W. Ressom , Lombardi Comprehensive Cancer Center, Georgetown University, Washignton, DC, USA
pp. 1543-1547

Simulation of effects of TBX18 on the pacemaker activity of human ventricular cells (Abstract)

Yue Zhang , School of Computer Science and Technology, Harbin Institute of Technology, China
Kuanquan Wang , School of Computer Science and Technology, Harbin Institute of Technology, China
Henggui Zhang , School of Computer Science and Technology, Harbin Institute of Technology, China
Wei Wang , School of Physics and Astronomy, University of Manchester, U.K
Henggui Zhang , School of Physics and Astronomy, University of Manchester, U.K
pp. 1548-1551

Reconstructing transcriptional Regulatory Networks using data integration and Text Mining (Abstract)

Rafael T. Pereira , Centre of Biological Engineering, University of Minho, Braga, Portugal 4710-057
Hugo Costa , SilicoLife, Braga, Portugal
Sonia Carneiro , Centre of Biological Engineering, University of Minho, Braga, Portugal 4710-057
Miguel Rocha , Centre of Biological Engineering, University of Minho, Braga, Portugal 4710-057
Rui Mendes , Centre of Biological Engineering, University of Minho, Braga, Portugal 4710-057
pp. 1552-1558

Gene prioritization through geometric-inspired kernel data fusion (Abstract)

Pooya Zakeri , Department of Electrical Engineering - STADIUS, KU Leuven, 3001, Belgium
Sarah Elshal , Department of Electrical Engineering - STADIUS, KU Leuven, 3001, Belgium
Yves Moreau , Department of Electrical Engineering - STADIUS, KU Leuven, 3001, Belgium
pp. 1559-1565

A Genetic Algorithm for the selection of structural MRI features for classification of Mild Cognitive Impairment and Alzheimer's Disease (Abstract)

Alexander Luke Spedding , School of Systems Engineering, University of Reading, UK
Giuseppe Di Fatta , School of Systems Engineering, University of Reading, UK
Mario Cannataro , Bioinformatics Laboratory, Department of Medical and Surgical Sciences, Magna Graecia University of Catanzaro, Italy
pp. 1566-1571

Quantitative clinical guidelines for imaging use in evaluation of pediatric cardiomyopathy (Abstract)

Yuzhe Liu , Department of Biomedical Informatics, University of Pittsburgh, USA
Vanathi Gopalakrishnan , Department of Biomedical Informatics, University of Pittsburgh, USA
Shobhit Madan , Children's Hospital of Pittsburgh, USA
pp. 1572-1578

A new compact set of biomarkers for distinguishing among ten breast cancer subtypes (Abstract)

Forough Firoozbakht , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Iman Rezaeian , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Alioune Ngom , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Luis Rueda , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
pp. 1579-1585

A longitudinal support vector regression for prediction of ALS score (Abstract)

Wei Du , Center for Information Technology, National Institutes of Health, Bethesda, MD 20892-5624, United States
Huey Cheung , Center for Information Technology, National Institutes of Health, Bethesda, MD 20892-5624, United States
Calvin A. Johnson , Center for Information Technology, National Institutes of Health, Bethesda, MD 20892-5624, United States
Ilya Goldberg , Intramural Research Program, National Institutes on Aging, Baltimore, MD 21224-6825, United States
Madhav Thambisetty , Intramural Research Program, National Institutes on Aging, Baltimore, MD 21224-6825, United States
Kevin Becker , Intramural Research Program, National Institutes on Aging, Baltimore, MD 21224-6825, United States
pp. 1586-1590

Integration of multimodal RNA-seq data for prediction of kidney cancer survival (Abstract)

Matt Schwartz , Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, USA
Martin Park , Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, USA
John H. Phan , Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, USA
May D. Wang , Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, USA
pp. 1591-1595

EEG-based seizure detection using discrete wavelet transform through full-level decomposition (Abstract)

Duo Chen , School of Biological Science & Medical Engineering, Southeast University, Nanjing, Jiangsu, China
Suiren Wan , School of Biological Science & Medical Engineering, Southeast University, Nanjing, Jiangsu, China
Forrest Sheng Bao , Dept. of Electrical & Computer Engineering, University of Akron, OH, USA
pp. 1596-1602

Effective image fusion method to study Alzheimer's disease using MR, PET images (Abstract)

Arpita Das , Department of Radio Physics & Electronics, University of Calcutta, India
Mahua Bhattacharya , Indian Institute of Information Technology & Management, Gwalior, India
pp. 1603-1607

Semantic mapping to align PPI networks and predict conserved protein complexes (Abstract)

Lizhu Ma , Department of Computer Science, Baylor University, Waco, TX, USA
Young-Rae Cho , Department of Computer Science, Baylor University, Waco, TX, USA
pp. 1608-1613

Diffusion kernel to identify missing PPIs in protein network biomarker (Abstract)

Dominic K. Bett , Department of Mathematics and Computer Science, Claflin University, SC 29115, USA
Ananda Mohan Mondal , Department of Mathematics and Computer Science, Claflin University, SC 29115, USA
pp. 1614-1619

MODULA: A network module based local protein interaction network alignment method (Abstract)

Pietro H Guzzi , Dept Surgical Medical Sciences, University of Catanzaro, Italy
Pierangelo Veltri , Dept Surgical Medical Sciences, University of Catanzaro, Italy
Swarup Roy , Dept of Information Technology, North-Eastern Hill University, India
Jugal K Kalita , Dept of Computer Science, University of Colorado, Colorado Springs, USA
pp. 1620-1623

Testing whether hot regions in protein-protein interactions are conserved in different species (Abstract)

Jing Hu , School of Computer Science and Technology, Wuhan University of Science and Technology, China
Xiaolong Zhang , School of Computer Science and Technology, Wuhan University of Science and Technology, China
pp. 1624-1629

Mining maximal subnetworks from interaction network with node attributes (Abstract)

Aditya Goparaju , Department of Computer Science, North Dakota State University, Fargo, 58104, United States
Bassam Qormosh , Department of Computer Science, North Dakota State University, Fargo, 58104, United States
Saeed Salem , Department of Computer Science, North Dakota State University, Fargo, 58104, United States
pp. 1630-1635

SRP: A concise non-parametric similarity-rank-based model for predicting drug-target interactions (Abstract)

Jian-Yu Shi , School of Life Sciences, Northwestern Polytechnical University, Xi'an, China
Siu-Ming Yiu , Department of Computer Science, The University of Hong Kong, China
pp. 1636-1641

The estimation of dimensionality in gene expression data using Nonnegative Matrix Factorization (Abstract)

Conor J. Kelton , Dept. of Mathematics and Statistics, The College of New Jersey, Ewing, 08628, USA
Waishing Lee , Division of Oncology Biostatistics and Bioinformatics, The Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins School of Medicine, Baltimore, MD 21205, USA
Matthew Rusay , Dept. of Mathematics and Statistics, The College of New Jersey, Ewing, 08628, USA
Ondrej Maxian , Dept. of Mathematics and Statistics, The College of New Jersey, Ewing, 08628, USA
Elana J. Fertig , Division of Oncology Biostatistics and Bioinformatics, The Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins School of Medicine, Baltimore, MD 21205, USA
Michael F. Ochs , Dept. of Mathematics and Statistics, The College of New Jersey, Ewing, 08628, USA
pp. 1642-1649

The Nonnegative Matrix Factorization and atomic deconvolution (Abstract)

Kazufumi Ito , Department of Mathematics, North Carolina State University, Raleigh, 27606, United States
Amanda K. Landi , Department of Mathematics, North Carolina State University, Raleigh, 27606, United States
pp. 1650-1657

A hybrid algorithm for non-negative matrix factorization based on symmetric information divergence (Abstract)

Karthik Devarajan , Department of Biostatistics & Bioinformatics, Fox Chase Cancer Center, Temple University Health System, Philadelphia, PA 19111, United States
Nader Ebrahimi , Division of Statistics, Northern Illinois University, DeKalb, 60115, United States
Ehsan Soofi , Lubar School of Business, University of Wisconsin-Milwaukee, Address P.O.Box 742, 53201, United States
pp. 1658-1664

Data integration in machine learning (Abstract)

Yifeng Li , Information and Communications Technologies, National Research Council of Canada, Ottawa, Ontario, Canada
Alioune Ngom , School of Computer Science, University of Windsor, Ontario, Canada
pp. 1665-1671

Integrating multiple sources of genomic data by multiplex network reconstruction (Abstract)

S. Gao , College of Computer Science & Technology, Jilin University, China
W.Y. Zou , College of Computer Science & Technology, Jilin University, China
Y.Y. Liu , College of Computer Science & Technology, Jilin University, China
X.W. Wang , College of Computer Science & Technology, Jilin University, China
Y. Zhuang , College of Computer Science & Technology, Jilin University, China
X.W. Wei , College of Computer Science & Technology, Jilin University, China
R. Alhajj , Department of Computer Science, University of Calgary, Canada
pp. 1672-1677

An algorithm for discovering deep order preserving submatrix in gene expression data (Abstract)

Qiuhua Kuang , School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, China
Meizhen Zhang , School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, China
Zhihao Ma , School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, China
Bo Ma , School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, China
Zhiwen Liu , School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, China
Yun Xue , School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, China
pp. 1678-1683

DNA sequences compression algorithms based on the two bits codation method (Abstract)

Bacem Saada , Harbin Engineering University, China
Jing Zhang , Harbin Engineering University, China
pp. 1684-1686

A unified approach to the computation and analysis of strings of gene expression states (Abstract)

Jaime Seguel , Department of Electrical and Computer Engineering, University of Puerto Rico at Mayagüez, PR 00681-9000
Marie Lluberes , Doctoral Program in Computing and Information Sciences and Engineering, University of Puerto Rico at Mayagüez, Puerto Rico
pp. 1687-1693

Leveraging the k-Nearest Neighbors classification algorithm for Microbial Source Tracking using a bacterial DNA fingerprint library (Abstract)

Jeffrey D. McGovern , Department of Computer Science, California Polytechnic State University, San Luis Obispo, 93407, United States
Alexander Dekhtyar , Department of Computer Science, California Polytechnic State University, San Luis Obispo, 93407, United States
Christopher Kitts , Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, 93407, United States
Michael Black , Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, 93407, United States
Jennifer VanderKelen , Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, 93407, United States
Anya Goodman , Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, 93407, United States
pp. 1694-1701

Bo's abdominal acupuncture mitigate post-stroke fatigue: A clinical center retrospective analysis (Abstract)

Ruihuan Pan , Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Mingfeng He , Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Lechang Zhan , Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
Zhen Huang , The Second Institute of Clinical Medicine, Guangzhou University of Chinese Medicine, 510120, China
Jie Zhan , The Second Institute of Clinical Medicine, Guangzhou University of Chinese Medicine, 510120, China
Hongxia Chen , Guangdong Provincial Hospital of Chinese Medicine, Guangzhou 510006, China
pp. 1702-1705

Influence of heart rate variability in healthy subjects with respiratory manipulation (Abstract)

Wen-Chen Lin , Department of Electrical Engineering, Chung Yuan Christian University, Taoyuan, Taiwan
Tieh-Cheng Fu , Department of Physical Medicine and Rehabilitation, Chang Gung Memorial Hospital, Keeling, Taiwan
Sheng-Cheng Huang , Department of Electrical Engineering, Chung Yuan Christian University, Taoyuan, Taiwan
Cheng-Lun Tsai , Technology Translation Center for Medical Device, Chung Yuan Christian University, Taoyuan, Taiwan
Wen-Chi Lin , Technology Translation Center for Medical Device, Chung Yuan Christian University, Taoyuan, Taiwan
Kang-Ping Lin , Department of Electrical Engineering, Chung Yuan Christian University, Taoyuan, Taiwan
pp. 1706-1708

Residue-residue contact prediction in the HIV-1 envelope glycoprotein complex (Abstract)

Reda Rawi , Computational Science and Engineering, Qatar Computing Research Institute, Hamad Bin Khalifa University, Doha, Qatar
Khalid Kunji , Computational Science and Engineering, Qatar Computing Research Institute, Hamad Bin Khalifa University, Doha, Qatar
Abdelali Haoudi , King Abdullah International Medical Research Center, King Abdulaziz Medical City, Riyadh, Saudi Arabia
Halima Bensmail , Computational Science and Engineering, Qatar Computing Research Institute, Hamad Bin Khalifa University, Doha, Qatar
pp. 1709-1711

Plugin for concept-assisted search and navigation on PUBMED (Abstract)

Thomas Joseph , TCS Innovation Labs, Tata Consultancy Services Limited 1, Software Units Layout, Madhapur, Hyderabad, India
Vangala Govindakrishnan Saipradeep , TCS Innovation Labs, Tata Consultancy Services Limited 1, Software Units Layout, Madhapur, Hyderabad, India
Sujatha Kotte , TCS Innovation Labs, Tata Consultancy Services Limited 1, Software Units Layout, Madhapur, Hyderabad, India
Aditya Rao , TCS Innovation Labs, Tata Consultancy Services Limited 1, Software Units Layout, Madhapur, Hyderabad, India
Rajgopal Srinivasan , TCS Innovation Labs, Tata Consultancy Services Limited 1, Software Units Layout, Madhapur, Hyderabad, India
pp. 1712-1714

Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera) (Abstract)

Gladys K Andino , Purdue University, West Lafayette, Indiana, 47907, United States
Michael Gribskov , Purdue University, West Lafayette, Indiana, 47907, United States
Greg J. Hunt , Purdue University, West Lafayette, Indiana, 47907, United States
Denis Anderson , Abu Dhabi Food Control Authority, Al Ain, United Arab Emirates
Jay D. Evans , Agricultural Research Services, USDA, Beltsville, MD, 20705, United States
pp. 1715-1716

Protein-protein interaction extraction based on actively transfer learning (Abstract)

Lishuang Li , School of Computer Science and Technology, Dalian University of Technology, China
Jieqiong Zheng , School of Computer Science and Technology, Dalian University of Technology, China
Dingxin Song , School of Computer Science and Technology, Dalian University of Technology, China
Rui Guo , School of Computer Science and Technology, Dalian University of Technology, China
Degen Huang , School of Computer Science and Technology, Dalian University of Technology, China
pp. 1717

Comparative study of Middle East respiratory syndrome coronavirus using bioinformatics techniques (Abstract)

Insung Ahn , Biomedical Prediction Technology Lab., Korea Institute of Science and Technology Information, Daejeon, Korea
Jin-Hwa Jang , Biomedical Prediction Technology Lab., Korea Institute of Science and Technology Information, Daejeon, Korea
Insung Ahn , Department of Big Data Science, University of Science & Technology, Daejeon, Korea
pp. 1718-1719

Genome-wide association study of biochemical traits based on eQTL-SNPs in Korean (Abstract)

Seok Won Jeong , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
Myungguen Chung , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
Soo-Jung Park , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
Seong Beom Cho , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
pp. 1720

Development and testing of prediction models for end stage kidney disease patient nonadherence to renal replacement treatment regimens utilizing big data and healthcare informatics (Abstract)

Yue Jiao , Fresenius Medical Care North America, Waltham, United States
Dan Geary , Fresenius Medical Care North America, Waltham, United States
Sheetal Chaudhuri , Fresenius Medical Care North America, Waltham, United States
Mahathi Mothali , Fresenius Medical Care North America, Waltham, United States
Terry Ketchersid , Fresenius Medical Care North America, Waltham, United States
Dugan Maddux , Fresenius Medical Care North America, Waltham, United States
John Larkin , Fresenius Medical Care North America, Waltham, United States
Scott Ash , Fresenius Medical Care North America, Waltham, United States
Len Usvyat , Fresenius Medical Care North America, Waltham, United States
Franklin Maddux , Fresenius Medical Care North America, Waltham, United States
Peter Kotanko , Renal Research Institute, New York, United States
pp. 1721

Entropy chain multi-label classifiers for Traditional Medicine diagnosing Parkinson's disease (Abstract)

Yue Peng , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
Ming Fang , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
Chongjun Wang , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
Junyuan Xie , National Key Laboratory for Novel Software Technology at Nanjing University, Department of Computer Science and Technology, Nanjing University, China
pp. 1722-1724

Prediction of radioprotectors targeting p53 for suppression of acute effect of cancer radiotherapy using machine learning (Abstract)

Atsushi Matsumoto , Department of Industrial Administration, Faculty of Science and Technology, Tokyo University of Science, Japan
Tadasuke Ito , Department of Industrial Administration, Faculty of Science and Technology, Tokyo University of Science, Japan
Yurie Nishi , Department of Applied Biological Science, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Japan
Tatsuro Teraoka , Department of Applied Biological Science, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Japan
Shin Aoki , Department of Applied Biological Science, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Japan
Hayato Ohwada , Department of Industrial Administration, Faculty of Science and Technology, Tokyo University of Science, Japan
pp. 1725-1727

Identifying driver genomic alterations in cancers by searching minimum-weight, mutually exclusive sets (Abstract)

Songjian Lu , University of Pittsburgh, PA 15260, United States
Kevin Lu , University of Pittsburgh, PA 15260, United States
Shi-Yuan Cheng , Northwestern University, Evanston, IL 60208, United States
Bo Hu , Northwestern University, Evanston, IL 60208, United States
Xiaojun Ma , University of Pittsburgh, PA 15260, United States
Nicholas Nystrom , Pittsburgh Supercomputing Center, PA 15213, United States
Xinghua Lu , University of Pittsburgh, PA 15260, United States
pp. 1728-1730

Cooperative service model innovation and pilot application in the prevention and control on diabetic retinopathy with web-movable hand-hold fundus camera in regional health and medicine of digitization (Abstract)

ZhiWei Liang , Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Guangdong, China
DongXu Jiang , Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Guangdong, China
XiaoPing Lai , Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Guangdong, China
XueLian Mo , Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Guangdong, China
ZhiWei Liang , Guangzhou University of Chinese Medicine, Guangdong, China
QianRong Liang , Guangzhou University of Chinese Medicine, Guangdong, China
XiaoYan Luo , Guangzhou University of Chinese Medicine, Guangdong, China
LiWen Zhou , Community health Service Centers of Machong Town of Dongguan, Guangdong, China
ZhongXun Yuan , Community health Service Centers of Machong Town of Dongguan, Guangdong, China
JianBiao Xu , Health Information and Statistics Center of Dongguan, Guangdong, China
XiaoYang Zhang , Health Information and Statistics Center of Dongguan, Guangdong, China
Ning Xu , Department of Ophthalmology, Guangzhou 8th People's Hospital, Guangdong, China
Ye Yuan , Yanhuang Oriental (Beijing) Company Ltd. of Health Science and Technology, China
Jing An , Yanhuang Oriental (Beijing) Company Ltd. of Health Science and Technology, China
JuanHong Zeng , Yanhuang Oriental (Beijing) Company Ltd. of Health Science and Technology, China
ShouZeng Zheng , Yanhuang Oriental (Beijing) Company Ltd. of Health Science and Technology, China
CanDong Li , Fujian University of Chinese Medicine, Fuzhou, China
Yi Zhou , Computer Center, Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, Guangdong, China
pp. 1731-1733

Cell nuclei segmentation in glioma histopathology images with color decomposition based active contours (Abstract)

V. B. Surya Prasath , Computational Imaging and Visualization Analysis (CiVA) Lab, Department of Computer Science, University of Missouri-Columbia, 65211 USA
Kiichi Fukuma , Graduate School of Engineering, Mie University, Japan
Bruce J. Aronow , Cincinnati Childrens Hospital Medical Center, OH 45229 USA
Hiroharu Kawanaka , Graduate School of Engineering, Mie University, Japan
pp. 1734-1736

A question-answering system over Traditional Chinese Medicine (Abstract)

Xiangzhou Huang , Zhejiang University, Hangzhou, China
Yin Zhang , Zhejiang University, Hangzhou, China
Baogang Wei , Zhejiang University, Hangzhou, China
Liang Yao , Zhejiang University, Hangzhou, China
pp. 1737-1739

Vascularization features for polyp localization in capsule endoscopy (Abstract)

V. B. Surya Prasath , Computational Imaging and Visualization Analysis (CiVA) Lab, Department of Computer Science, University of Missouri-Columbia, 65211 USA
Hiroharu Kawanaka , Graduate School of Engineering, Mie University, 1577 Kurima-machiya, Tsu, 514-8507, Japan
pp. 1740-1742

Heartbeat classification for detecting arrhythmia using normalized beat morphology features (Abstract)

Juyoung Park , Department of Computer Science & Engineering, Hanyang University, Ansan, Republic of Korea
Mingon Kang , Department of Computer Science & Information Systems, Texas A&M University - Commerce, USA 75428
Younghoon Kim , Department of Computer Science & Engineering, Hanyang University, Ansan, Republic of Korea
Kyungtae Kang , Department of Computer Science & Engineering, Hanyang University, Ansan, Republic of Korea
pp. 1743-1744

A new DP algorithm for comparing gene expression data using geometric similarity (Abstract)

Amir Vajdi , Department of Computer Science, University of Massachusetts Boston, USA 02125
Nurit Haspel , Department of Computer Science, University of Massachusetts Boston, USA 02125
Hadi Banaee , Center for Applied Autonomous Sensor Systems (AASS), 701 82 Örebro University, Sweden
pp. 1745-1747

A new encoding scheme for protein structure representation (Abstract)

Jun Tan , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, USA
Donald Adjeroh , Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, USA
pp. 1748-1750

An algorithm for the diversity of XML document based on the model of the rights-distribution for ancestral property and its testing application in the field of health and Chinese Medicine (Abstract)

ZhiWei Liang , Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Guangdong, China
YongYun Wang , Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical and Engineering for Chinese Medicine, Guangdong, China
ZhiWei Liang , Guangzhou University of Chinese Medicine, Guangdong, China
QianRong Liang , Guangzhou University of Chinese Medicine, Guangdong, China
XiaoYan Luo , Guangzhou University of Chinese Medicine, Guangdong, China
LiNi Wang , Yanhuang Oriental (Beijing) Company Ltd. of Health Science and Technology, China
Ye Yuan , Yanhuang Oriental (Beijing) Company Ltd. of Health Science and Technology, China
CanDong Li , The syndrome research base of TCM, Fujian University of Chinese Medicine, Fuzhou, China
Yi Zhou , Computer Center, Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, Guangdong, China
pp. 1751-1753

MIST: Microscopy Image Stitching Tool (Abstract)

Joe Chalfoun , Information Technology Laboratory, National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, USA, 20878
Michael Majurski , Information Technology Laboratory, National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, USA, 20878
Tim Blattner , Information Technology Laboratory, National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, USA, 20878
Walid Keyrouz , Information Technology Laboratory, National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, USA, 20878
Peter Bajcsy , Information Technology Laboratory, National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, USA, 20878
Mary Brady , Information Technology Laboratory, National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, USA, 20878
pp. 1757

A case-control genome-wide association study of metabolic syndrome in Korean (Abstract)

Myungguen Chung , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
Seok Won Jeong , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
Soo-Jung Park , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
Seong Beom Cho , Division of Biomedical Informatics, Center for Genome Science, National Institute of Health, OHTAC, 187 Osongsaengmyeong2(i)-ro, Gangoe-myeon, Cheongwon-gun, ChoongchungBuk-do, South Korea
pp. 1758

Structure-based protein folding type classification and folding rate prediction (Abstract)

Balachandran Manavalan , School of Computational Sciences, Center for In silico protein science, Korea Institute for Advanced Study, Seoul, South Korea
Kunihiro Kuwajima , Department of Physics, Graduate School of Science, University of Tokyo, Japan
Insuk Joung , School of Computational Sciences, Center for In silico protein science, Korea Institute for Advanced Study, Seoul, South Korea
Jooyoung Lee , School of Computational Sciences, Center for In silico protein science, Korea Institute for Advanced Study, Seoul, South Korea
pp. 1759-1761

ZSeq 2.0: A fully automatic preprocessing method for next generation sequencing data (Abstract)

Abed Alkhateeb , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Iman Rezaeian , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
Luis Rueda , School of Computer Science, University of Windsor, 401 Sunset Avenue, Ontario, Canada
pp. 1762-1764

Discover potential adverse drug reactions using the skip-gram model (Abstract)

Mingzhen Zhao , School of Computer Science and Technology, Dalian University of Technology, Liaoning, China
Bo Xu , School of Computer Science and Technology, Dalian University of Technology, Liaoning, China
Hongfei Lin , School of Computer Science and Technology, Dalian University of Technology, Liaoning, China
Zhihao Yang , School of Computer Science and Technology, Dalian University of Technology, Liaoning, China
Jian Wang , School of Computer Science and Technology, Dalian University of Technology, Liaoning, China
pp. 1765-1767

Fair evaluation of global network aligners (Abstract)

Joseph Crawford , Department of Computer Science and Engineering, Interdisciplinary Center for Network Science and Applications, and ECK Institute for Global Health, University of Notre Dame, 46556, United States
Yihan Suny , Department of Computer Science and Technology, Tsinghua University, China
Tijana Milenkovic , Department of Computer Science and Engineering, Interdisciplinary Center for Network Science and Applications, and ECK Institute for Global Health, University of Notre Dame, 46556, United States
pp. 1768-1770

De novo genome assembly tool comparison for highly heterozygous species Vitis vinifera cv. Sultanina (Abstract)

Sagar Patel , Plant Science Department, South Dakota State University, Brookings, USA
Padmapriya Swaminathan , Plant Science Department, South Dakota State University, Brookings, USA
Anne Fennell , Plant Science Department, South Dakota State University, Brookings, USA
Erliang Zeng , Department of Biology, Department of Computer Science, University of South Dakota, Vermillion, USA
pp. 1771-1773

UIMA based solution in pharma text (Abstract)

Aditya Rao , TCS Innovation Labs, Tata Consultancy Services Limited, 1, Software Units Layout, Madhapur, Hyderabad, India
Thomas Joseph , TCS Innovation Labs, Tata Consultancy Services Limited, 1, Software Units Layout, Madhapur, Hyderabad, India
Vangala Govindakrishnan Saipradeep , TCS Innovation Labs, Tata Consultancy Services Limited, 1, Software Units Layout, Madhapur, Hyderabad, India
Rajgopal Srinivasan , TCS Innovation Labs, Tata Consultancy Services Limited, 1, Software Units Layout, Madhapur, Hyderabad, India
pp. 1774-1776

Smart food: Crowdsourcing of experts in nutrition and non-experts in identifying calories of meals using smartphone as a potential tool contributing to obesity prevention and management (Abstract)

Anne Moorhead , School of Communication, University of Ulster, Newtownabbey, Northern Ireland
Raymond Bond , School of Computing and Mathematics, University of Ulster, Newtownabbey, Northern Ireland
Huri Zheng , School of Computing and Mathematics, University of Ulster, Newtownabbey, Northern Ireland
pp. 1777-1779

Preliminary study on C-arm technique for nephrolithiasis and kidney stones detection (Abstract)

Nuhad Malalla , Department of Electrical and Computer Engineering, Southern Illinois University Carbondale, 62901, USA
Pengfei Sun , Department of Electrical and Computer Engineering, Southern Illinois University Carbondale, 62901, USA
Ying Chen , Department of Electrical and Computer Engineering, Southern Illinois University Carbondale, 62901, USA
Michael E. Lipkin , Division of Urologic Surgery, Duke University Medical Center, Durham, NC 27705, USA
Glenn M. Preminger , Division of Urologic Surgery, Duke University Medical Center, Durham, NC 27705, USA
Jun Qin , Department of Electrical and Computer Engineering, Southern Illinois University Carbondale, 62901, USA
pp. 1780-1782

Rare Diseases clustering based on structural regularities at the gene structure (Abstract)

Fabian Tobar-Tosse , Research Group of Basic and Clinical Sciences for Health, Pontificia Universidad Javeriana Cali, Colombia
Eliana Ocampo-Toro , Research Group of Basic and Clinical Sciences for Health, Pontificia Universidad Javeriana Cali, Colombia
Pedro M. Hernandez , Research Group of Basic and Clinical Sciences for Health, Pontificia Universidad Javeriana Cali, Colombia
Andres Zuniga , Research Group of Basic and Clinical Sciences for Health, Pontificia Universidad Javeriana Cali, Colombia
Sebastian Florido-Sarria , Research Group of Basic and Clinical Sciences for Health, Pontificia Universidad Javeriana Cali, Colombia
Paula M. Hurtado , Research Group of Basic and Clinical Sciences for Health, Pontificia Universidad Javeriana Cali, Colombia
pp. 1783-1784

Error correction and DeNovo genome Assembly for the MinIon sequencing reads mixing Illumina short reads (Abstract)

Mehdi Kchouk , Laboratory of Technologies of Information and Communication and Electrical Engineering (LaTICE), National Superior School of Engineers of Tunis (ENSIT), University of Tunis, Tunisia
Mourad Elloumi , Laboratory of Technologies of Information and Communication and Electrical Engineering (LaTICE), National Superior School of Engineers of Tunis (ENSIT), University of Tunis, Tunisia
pp. 1785

PACH: Ploidy-AgnostiC Haplotyping (Abstract)

Sepideh Mazrouee , Computer Science Department, University of California Los Angeles, 3551 Boelter Hall, 90095-1596, United States
pp. 1786-1788

Author index (PDF)

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