The Community for Technology Leaders
13th IEEE International Conference on BioInformatics and BioEngineering (2001)
Bethesda, Maryland
Mar. 4, 2001 to Mar. 6, 2001
ISBN: 0-7695-1423-5
TABLE OF CONTENTS

Querying phylogenies visually (Abstract)

H.M. Jamil , Dept. of Comput. Sci., Mississippi State Univ., MS, USA
pp. 3-10

PocketMol: a molecular visualization tool for the Pocket PC (Abstract)

J.R. Gilder , Dept. of Comput. Sci. & Eng., Wright State Univ., Dayton, OH, USA
pp. 11-14

Optimized seamless integration of biomolecular data (Abstract)

B.A. Eckman , GlaxoSmithKline, King of Prussia, PA, USA
pp. 23-32

PSST... the probabilistic sequence search tool (Abstract)

C.J. Miller , Dept. of Comput. Sci., Manchester Univ., UK
pp. 33-40

Interrelated two-way clustering: an unsupervised approach for gene expression data analysis (Abstract)

Chun Tang , Dept. of Comput. Sci. & Eng., State Univ. of New York, Buffalo, NY, USA
pp. 41-48

A fast pruning algorithm for optimal sequence alignment (Abstract)

A. Davidson , Dept. of Comput. Sci., Alberta Univ., Edmonton, Alta., Canada
pp. 49-56

Applying data warehouse concepts to gene expression data management (Abstract)

V.M. Markowitz , Data Manage. Syst., Gene Logic Inc, Berkeley, CA, USA
pp. 65-72

Utilizing multiple bioinformatics information sources: an XML database approach (Abstract)

R.K. Wong , Sch. of Comput. Sci. & Eng., New South Wales Univ., Sydney, NSW, Australia
pp. 73-80

Comparing algorithms for large-scale sequence analysis (Abstract)

H. Nash , Parabon Computation, Inc, Fairfax, VA, USA
pp. 89-96

An XML application for genomic data interoperation (Abstract)

Kei-Hoi Cheung , Center for Med. Informatics, Yale Univ., New Haven, CT, USA
pp. 97-103

Thinking nonlinearly about brain dynamics: a neurocommentary (Abstract)

M.E. Brandt , Sch. of Health Inf. Sci., Univ. of Texas Health Sci. Center, Houston, TX, USA
pp. 112-118

Texture-based 3D brain imaging (Abstract)

S. Saladi , NSF Eng. Res. Center, Mississippi State Univ., MS, USA
pp. 136-143

Supporting remote user defined functions in heterogeneous biological databases (Abstract)

Liangyou Chen , Dept. of Comput. Sci., Mississippi State Univ., MS, USA
pp. 144-152

Medical decision-making and collaborative reasoning (Abstract)

J.M. Quintero , Ecole Nat. Superieure des Telecommun. de Bretagne, Brest, France
pp. 161-165

Comparing trees in a phylogenetic relationship repository (Abstract)

J. Bluis , Dept. of Comput. Sci. & Eng., Connecticut Univ., Storrs, CT, USA
pp. 166-173

Gene classification using expression profiles: a feasibility study (Abstract)

M. Kuramochi , Dept. of Comput. Sci., Minnesota Univ., Minneapolis, MN, USA
pp. 191-200

Development of a robotic device for MRI-guided interventions in the breast (Abstract)

N.V. Tsekos , Center for Magnetic Resonance Res., Minnesota Univ., Minneapolis, MN, USA
pp. 201-208

Registration of multi-modal brain images using the rigidity constraint (Abstract)

L. Ding , Dept. of Comput. Sci. & Eng., Wright State Univ., Dayton, OH, USA
pp. 217-222

Chemosensory adaptation in an electronic nose (Abstract)

R. Gutierrez-Osuna , Dept. of Comput. Sci. & Eng., Wright State Univ., Dayton, OH, USA
pp. 223-229

Knowledge discovery in biological data sets using a hybrid Bayes classifier/evolutionary algorithm (Abstract)

M.L. Raymer , Dept. of Comput. Sci. & Eng., Wright State Univ., Dayton, OH, USA
pp. 236-245

Investigation of ultrasound image based correction of intraoperative brain shift (Abstract)

L.M. Bates , Biomed. Imaging Resource, Mayo Found., Rochester, MN, USA
pp. 254-261

Medical applications of radiation micro-force (Abstract)

M. Fatemi , Mayo Clinic, Rochester, MN, USA
pp. 262

Profile combinatorics for fragment selection in comparative protein structure modeling (Abstract)

D.J. Sweeney , Dept. of Comput. Sci. & Eng., Wright State Univ., Dayton, OH, USA
pp. 271-278

Author index (PDF)

pp. 278-279

Mining Genome Variation to Associate Disease with Transcription Factor Binding Site Alteration (Abstract)

Julia Ponomarenko , Institute of Cytology and Genetics
Tatyana Merkulova , Institute of Cytology and Genetics
Galina Orlova , Institute of Cytology and Genetics
Oleg Fokin , Institute of Cytology and Genetics
Mikhail Ponomarenko , Institute of Cytology and Genetics
Elena Gorshkova , Institute of Cytology and Genetics
pp. 153

Medical Decision-Making and Collaborative Reasoning (Abstract)

H. Villegas , Universidad de Carabobo
G. Montilla , Universidad de Carabobo
M. Abraham , Ecole Nationale Sup?rieure des T?l?communications de Bretagne
J. M. Quintero , Ecole Nationale Sup?rieure des T?l?communications de Bretagne
A. Aguilera , Universidad de Carabobo
B. Solaiman , Ecole Nationale Sup?rieure des T?l?communications de Bretagne
pp. 161

Comparing Trees in a Phylogenetic Relationship Repository (Abstract)

Pinglei Zhou , University of Connecticut
John Bluis , University of Connecticut
J. Peter Gogarten , University of Connecticut
Ravi Nori , University of Connecticut
Dong-Guk Shin , University of Connecticut
Hsin-Wei Wang , University of Connecticut
pp. 166

An Algebra for Semantic Interoperability of Information Sources (Abstract)

Gio Wiederhold , Stanford University
Prasenjit Mitra , Stanford University
pp. 174

Predicting RNA Secondary Structures with Arbitrary Pseudoknots by Maximizing the Number of Stacking Pairs (Abstract)

Samuel Ieong , Yale University
Tak-Wah Lam , The University of Hong Kong
Ming-Yang Kao , Northwestern University
Siu-Ming Yiu , The University of Hong Kong
Wing-Kin Sung , The University of Hong Kong
pp. 183

Gene Classification Using Expression Profiles: A Feasibility Study (Abstract)

Michihiro Kuramochi , University of Minnesota
George Karypis , University of Minnesota
pp. 191

Development of a Robotic Device for MRI-Guided Interventions in the Breast (Abstract)

Nikolaos V. Tsekos , Mallinckrodt Institute of Radiology
John Shudy , Artemis MRI, LLC
Panagiotis V. Tsekos , Multitask Consulting, Ltd.
Ioannis G. Koutlas , University of Minnesota
Essa Yacoub , University of Minnesota
pp. 201

Chemosensory Adaptation in an Electronic Nose (Abstract)

P. Sun , Wright State University
R. Gutierrez-Osuna , Wright State University
N. Powar , Wright State University
pp. 223

Knowledge Discovery in Biological Datasets Using a Hybrid Bayes Classifier/Evolutionary Algorithm (Abstract)

William F. Punch , Michigan State University
Leslie A. Kuhn , Michigan State University
Michael L. Raymer , Wright State University
pp. 236

Audio and Vision-Based Evaluation of Parkinson's Disease from Discourse Video (Abstract)

Robert Bryll , Wright State U.
Mary Harper , Purdue University
Lorraine Ramig , University of Colorado
Francis Quek , Wright State U.
Lei Chen , Purdue University
pp. 246

Investigation of Ultrasound Image Based Correction of Intraoperative Brain Shift (Abstract)

Richard A. Robb , Biomedical Imaging Resource
Lisa M. Bates , Biomedical Imaging Resource
pp. 254

Profile Combinatorics for Fragment Selection in Comparative Protein Structure Modeling (Abstract)

Travis E. Doom , Wright State University
Michael L. Raymer , Wright State University
Deacon J. Sweeney , Wright State University
Gerald M. Alter , Wright State University
pp. 271

Author Index (PDF)

pp. 279
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