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Issue No. 04 - July/August (2007 vol. 9)
ISSN: 1521-9615
pp: 50-60
Kedar Aras , University of Notre Dame
Mark S. Alber , University of Notre Dame
James A. Glazier , Indiana University
Maciej Swat , Indiana University
Trevor Cickovski , University of Notre Dame
Jesus A. Izaguirre , University of Notre Dame
Roeland M.H. Merks , Flanders Institute for Biotechnology and Ghent University
Stuart A. Newman , New York Medical College
H. George E. Hentschel , Emory University
Tilmann Glimm , Western Washington University
To gain performance, developers often build scientific applications in procedural languages, such as C or Fortran, which unfortunately reduces flexibility. To address this imbalance, the authors present CompuCell3D, a multitiered, flexible, and scalable problem-solving environment for morphogenesis simulations that's written in C++ using object-oriented design patterns.
software engineering, simulation, modeling, computer applications
Kedar Aras, Mark S. Alber, James A. Glazier, Maciej Swat, Trevor Cickovski, Jesus A. Izaguirre, Roeland M.H. Merks, Stuart A. Newman, H. George E. Hentschel, Tilmann Glimm, "From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development", Computing in Science & Engineering, vol. 9, no. , pp. 50-60, July/August 2007, doi:10.1109/MCSE.2007.74
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