2D Meets 4G: G-Quadruplexes in RNA Secondary Structure Prediction
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
By Andrea Tanzer, Christian Honer zu Siederdissen, Fabian Amman, Ivo L. Hofacker, Jing Qin, Peter F. Stadler, Ronny Lorenz, Stephan H. Bernhart
Issue Date:July 2013
G-quadruplexes are abundant locally stable structural elements in nucleic acids. The combinatorial theory of RNA structures and the dynamic programming algorithms for RNA secondary structure prediction are extended here to incorporate G-quadruplexes using ...