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Displaying 1-6 out of 6 total
An Efficient Alignment Algorithm for Searching Simple Pseudoknots over Long Genomic Sequence
Found in: IEEE/ACM Transactions on Computational Biology and Bioinformatics
By C. Ma,T. K. F. Wong,T. W. Lam,W. K. Hon,K. Sadakane,S. M. Yiu
Issue Date:November 2012
pp. 1629-1638
Structural alignment has been shown to be an effective computational method to identify structural noncoding RNA (ncRNA) candidates as ncRNAs are known to be conserved in secondary structures. However, the complexity of the structural alignment algorithms ...
 
An Efficient Alignment Algorithm for Searching Simple Pseudoknots over Long Genomic Sequence
Found in: IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
By Christopher Ma, K. Sadakane, S. M. Yiu, T. W. Lam, Thomas K. F. Wong, W. K. Hon
Issue Date:November 2012
pp. 1629-1638
Structural alignment has been shown to be an effective computational method to identify structural noncoding RNA (ncRNA) candidates as ncRNAs are known to be conserved in secondary structures. However, the complexity of the structural alignment algorithms ...
     
Voronoi diagrams by divergences with additive weights
Found in: Proceedings of the fourteenth annual symposium on Computational geometry (SCG '98)
By F. Takeuchi, H. Imai, K. Imai, K. Onishi, K. Sadakane, M. Inaba
Issue Date:June 1998
pp. 403-404
An interactive visualization of weighted three-dimensional α-hulls is presented for static and dynamic spheres. The α-hull is analytically computed and represented by a triangulated mesh. The entire surface is computed and displayed in real-time ...
     
A Fast Algorithms for Making Suffix Arrays and for Burrows-Wheeler Transformation
Found in: Data Compression Conference
By K. Sadakane
Issue Date:April 1998
pp. 0129
No summary available.
 
On Optimality of Varients of the Block Sorting Compression
Found in: Data Compression Conference
By K. Sadakane
Issue Date:April 1998
pp. 0570
No summary available.
 
Text Compression using Recency Rank with Context and Relation to Context Sorting, Block Sorting and PPM
Found in: Compression and Complexity of Sequences, International Conference on
By K. Sadakane
Issue Date:June 1997
pp. 305
No summary available.
 
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