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Second International Conference on Semantics, Knowledge, and Grid (SKG'06)
A Grid Service for Pattern Extraction from Mass Spectrometry Data
Guilin, Guangxi, China
November 01-November 03
ISBN: 0-7695-2673-X
Mario Cannataro, University Magna Gr?cia of Catanzaro, Italy
Pierangelo Veltri, University Magna Gr?cia of Catanzaro, Italy
The paper presents a Grid Service allowing to detect and extract the longest common sub-spectrum among a set of mass spectrometry spectra data. The service is based on a novel pattern extraction algorithm named LCSS (Longest Common Spectra SubString) that adapts a very popular string matching technique based on Suffix Trees to spectra data. The core of the algorithm and a first performance evaluation of the related Grid Service are discussed.
Index Terms:
Pattern Extraction, Mass Spectrometry, Suffix Tree, Grid Services
Citation:
Mario Cannataro, Pierangelo Veltri, "A Grid Service for Pattern Extraction from Mass Spectrometry Data," skg, pp.36, Second International Conference on Semantics, Knowledge, and Grid (SKG'06), 2006
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