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28th Hawaii International Conference on System Sciences (HICSS'95)
Hawaii, USA
January 04-January 07
ISBN: 0-8186-6921-7
ASCII Text
x 
 
Zhirong Sun, T. Blundell, "The pattern of common supersecondary structure (motifs) in protein database," Hawaii International Conference on System Sciences, pp. 312, 28th Hawaii International Conference on System Sciences (HICSS'95), 1995.
 
 
BibTex
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@article{ 10.1109/HICSS.1995.375325,
author = {Zhirong Sun and T. Blundell},
title = {The pattern of common supersecondary structure (motifs) in protein database},
journal ={Hawaii International Conference on System Sciences},
volume = {0},
year = {1995},
issn = {1060-3425},
pages = {312},
doi = {http://doi.ieeecomputersociety.org/10.1109/HICSS.1995.375325},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Hawaii International Conference on System Sciences
TI - The pattern of common supersecondary structure (motifs) in protein database
SN - 1060-3425
SP
EP
A1 - Zhirong Sun,
A1 - T. Blundell,
PY - 1995
KW - proteins; biology computing; chemistry computing; database management systems; common supersecondary structure; motifs; protein database; supersecondary motifs; proteins; residue conformation; nonregular structure regions; sequence pattern; homology modelling; structure prediction
VL - 0
JA - Hawaii International Conference on System Sciences
ER -
 
Zhirong Sun, Dept. of Biol. Sci. & Biotechnol., Tsinghua Univ., Beijing, China
T. Blundell, Dept. of Biol. Sci. & Biotechnol., Tsinghua Univ., Beijing, China
Supersecondary motifs have been analysed in 240 proteins defined at resolutions of 0.25 nm or better. Using five classes of residue conformation (a,b,e,l,t) in the non-regular structure regions, we have identified 50 classes that occur at least five times, and eleven classes that occur more than twenty-five times. The sequence pattern of the eleven most frequently occurring motifs have been characterised. The results should be useful for homology modelling and structure prediction.
Index Terms:
proteins; biology computing; chemistry computing; database management systems; common supersecondary structure; motifs; protein database; supersecondary motifs; proteins; residue conformation; nonregular structure regions; sequence pattern; homology modelling; structure prediction
Citation:
Zhirong Sun, T. Blundell, "The pattern of common supersecondary structure (motifs) in protein database," hicss, pp.312, 28th Hawaii International Conference on System Sciences (HICSS'95), 1995
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