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13th Annual IEEE Symposium on Field-Programmable Custom Computing Machines (FCCM'05)
Los Alamitos
April 18-April 20
ISBN: 0-7695-2445-1
ASCII Text
x 
 
Yongfeng Gu, Tom Van Court, Douglas DiSabello, Martin C. Herbordt, "Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations," Field-Programmable Custom Computing Machines, Annual IEEE Symposium on, pp. 269-270, 13th Annual IEEE Symposium on Field-Programmable Custom Computing Machines (FCCM'05), 2005.
 
 
BibTex
x
 
@article{ 10.1109/FCCM.2005.54,
author = {Yongfeng Gu and Tom Van Court and Douglas DiSabello and Martin C. Herbordt},
title = {Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations},
journal ={Field-Programmable Custom Computing Machines, Annual IEEE Symposium on},
volume = {0},
year = {2005},
isbn = {0-7695-2445-1},
pages = {269-270},
doi = {http://doi.ieeecomputersociety.org/10.1109/FCCM.2005.54},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Field-Programmable Custom Computing Machines, Annual IEEE Symposium on
TI - Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations
SN - 0-7695-2445-1
SP269
EP270
A1 - Yongfeng Gu,
A1 - Tom Van Court,
A1 - Douglas DiSabello,
A1 - Martin C. Herbordt,
PY - 2005
KW - null
VL - 0
JA - Field-Programmable Custom Computing Machines, Annual IEEE Symposium on
ER -
 
Yongfeng Gu, Boston University
Tom Van Court, Boston University
Douglas DiSabello, Boston University
Martin C. Herbordt, Boston University
Molecular Dynamics (MD) is of central importance to computational chemistry and its myriad applications. Here we show that, at even a preliminary stage of development, MD can be implemented efficiently on a COTS FPGA board, and that a 57x speed-up over a PC implementation can be obtained. We sketch our FPGA implementation and describe how performance tuning and precision management (currently in progress) could double this factor.
Citation:
Yongfeng Gu, Tom Van Court, Douglas DiSabello, Martin C. Herbordt, "Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations," fccm, pp.269-270, 13th Annual IEEE Symposium on Field-Programmable Custom Computing Machines (FCCM'05), 2005
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