Twentieth IEEE International Symposium on Computer-Based Medical Systems (CBMS'07)
Feature Extraction for DNA Microarray Data
Maribor, Slovenia
June 20-June 22
ISBN: 0-7695-2905-4
In this study we perform wavelet analysis on high dimensional microarray data. We perform two methods of feature extraction on microarray data, using approximation coefficients and detail coefficients. A set of orthogonal wavelet approximation coefficients based on wavelet decomposition are extracted to compress the gene profiles and reduce the dimensionality of microarray data. A set of orthogonal wavelet detail coefficients are extracted to characterize the localized features of gene profiles and reduce dimensionality. Experiments are performed on two datasets. The experimental results show a highly competitive accuracy is achieved compared to the best performance of other kinds of classification models using wavelet coefficients.