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19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06)
Extending EER Modeling Concepts for Biological Data
Salt Lake City, Utah
June 22-June 23
ISBN: 0-7695-2517-1
ASCII Text
x 
 
Ramez Elmasri, Feng Ji, Jack Fu, Yiming Zhang, Zoe Raja, "Extending EER Modeling Concepts for Biological Data," Computer-Based Medical Systems, IEEE Symposium on, pp. 599-604, 19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06), 2006.
 
 
BibTex
x
 
@article{ 10.1109/CBMS.2006.86,
author = {Ramez Elmasri and Feng Ji and Jack Fu and Yiming Zhang and Zoe Raja},
title = {Extending EER Modeling Concepts for Biological Data},
journal ={Computer-Based Medical Systems, IEEE Symposium on},
volume = {0},
year = {2006},
issn = {1063-7125},
pages = {599-604},
doi = {http://doi.ieeecomputersociety.org/10.1109/CBMS.2006.86},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Computer-Based Medical Systems, IEEE Symposium on
TI - Extending EER Modeling Concepts for Biological Data
SN - 1063-7125
SP599
EP604
A1 - Ramez Elmasri,
A1 - Feng Ji,
A1 - Jack Fu,
A1 - Yiming Zhang,
A1 - Zoe Raja,
PY - 2006
KW - null
VL - 0
JA - Computer-Based Medical Systems, IEEE Symposium on
ER -
 
Ramez Elmasri, University of Texas at Arlington, USA
Feng Ji, University of Texas at Arlington, USA
Jack Fu, University of Texas at Arlington, USA
Yiming Zhang, University of Texas at Arlington, USA
Zoe Raja, University of Texas at Arlington, USA
Biological data such as protein structure and function, DNA sequences, and metabolic pathways require conceptual modeling characteristics that are not available in the widely used ER (Entity-Relationship) model and its variant the EER (enhanced-ER) model. In this paper, we suggest a solution to this problem, requiring only minimal changes to the EER model by introducing specialized formal relationships for ordering, input/output processes and spatial structure. These changes facilitate more accurate modeling of biological ontologies, their structures, and mediator systems. We propose new EER schema constructs to represent the ordering of DNA sequences, the structure of proteins, and the processes of metabolic pathways.
Citation:
Ramez Elmasri, Feng Ji, Jack Fu, Yiming Zhang, Zoe Raja, "Extending EER Modeling Concepts for Biological Data," cbms, pp.599-604, 19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06), 2006
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