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2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007)
Constraint-Based Simulation of Biological Systems Described by Molecular Interaction Maps
Fremont, California
November 02-November 04
ISBN: 0-7695-3031-1
ASCII Text
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Luca Bortolussi, Simone Fonda, Alberto Policriti, "Constraint-Based Simulation of Biological Systems Described by Molecular Interaction Maps," Bioinformatics and Biomedicine, IEEE International Conference on, pp. 288-293, 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007), 2007.
 
 
BibTex
x
 
@article{ 10.1109/BIBM.2007.31,
author = {Luca Bortolussi and Simone Fonda and Alberto Policriti},
title = {Constraint-Based Simulation of Biological Systems Described by Molecular Interaction Maps},
journal ={Bioinformatics and Biomedicine, IEEE International Conference on},
volume = {0},
year = {2007},
isbn = {0-7695-3031-1},
pages = {288-293},
doi = {http://doi.ieeecomputersociety.org/10.1109/BIBM.2007.31},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Bioinformatics and Biomedicine, IEEE International Conference on
TI - Constraint-Based Simulation of Biological Systems Described by Molecular Interaction Maps
SN - 0-7695-3031-1
SP288
EP293
A1 - Luca Bortolussi,
A1 - Simone Fonda,
A1 - Alberto Policriti,
PY - 2007
VL - 0
JA - Bioinformatics and Biomedicine, IEEE International Conference on
ER -
 
We present a method to simulate biochemical networks described by the graphical notation of Molecular Inter- action Maps within stochastic Concurrent Constraint Pro- gramming. Such maps are compact, as they represent im- plicitly a wide set of reactions, and therefore not easy to simulate with standard tools. The encoding we propose is capable to stochastically simulate these maps implicitly, without generating the full list of reactions.
Citation:
Luca Bortolussi, Simone Fonda, Alberto Policriti, "Constraint-Based Simulation of Biological Systems Described by Molecular Interaction Maps," bibm, pp.288-293, 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007), 2007
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