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Fifth IEEE Symposium on Bioinformatics and Bioengineering (BIBE'05)
Constructing Phylogenetic Networks from Trees
Minneapolis, Minnesota
October 19-October 21
ISBN: 0-7695-2476-1
Sergey Bereg, University of Texas at Dallas
Kathryn Bean, University of Texas at Dallas
We present a new method of constructing a phylogenetic network from a given phylogenetic tree. It is based on a procedure that locally improves the tree. The procedure is quite general and can be applied to phylogenetic networks. By repeating local improvements user can introduce a given number of recombination cycles. A sequence of networks with decreasing distance deviation can be generated. The algorithm is efficient and shows a good performance on an example with plants. This is due to the fact that the update in every step is local and optimal.
Citation:
Sergey Bereg, Kathryn Bean, "Constructing Phylogenetic Networks from Trees," bibe, pp.299-305, Fifth IEEE Symposium on Bioinformatics and Bioengineering (BIBE'05), 2005
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