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21st International Conference on Advanced Information Networking and Applications Workshops (AINAW'07)
A Circular Hamming Distance, Circular Gumbel Distribution, RNA Relics and Primitive Genome
Niagara Falls, Ontario, Canada
May 21-May 23
ISBN: 0-7695-2847-3
ASCII Text
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Jacques Demongeot, Andres Moreira, "A Circular Hamming Distance, Circular Gumbel Distribution, RNA Relics and Primitive Genome," Advanced Information Networking and Applications Workshops, International Conference on, vol. 1, pp. 719-726, 21st International Conference on Advanced Information Networking and Applications Workshops (AINAW'07), 2007.
 
 
BibTex
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@article{ 10.1109/AINAW.2007.11,
author = {Jacques Demongeot and Andres Moreira},
title = {A Circular Hamming Distance, Circular Gumbel Distribution, RNA Relics and Primitive Genome},
journal ={Advanced Information Networking and Applications Workshops, International Conference on},
volume = {1},
year = {2007},
isbn = {0-7695-2847-3},
pages = {719-726},
doi = {http://doi.ieeecomputersociety.org/10.1109/AINAW.2007.11},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Advanced Information Networking and Applications Workshops, International Conference on
TI - A Circular Hamming Distance, Circular Gumbel Distribution, RNA Relics and Primitive Genome
SN - 0-7695-2847-3
SP719
EP726
A1 - Jacques Demongeot,
A1 - Andres Moreira,
PY - 2007
KW - null
VL - 1
JA - Advanced Information Networking and Applications Workshops, International Conference on
ER -
 
Jacques Demongeot, University J. Fourier, France
Andres Moreira, University J. Fourier, France
If we compare a RNA or DNA chain or ring sequence to a reference ring sequence or to random ring sequences, we need the circular version of some distances and distributions like the Hamming and Gumbel one's. We define here these circular versions and then we apply to the comparison of RNA relics like micro-RNAs and tRNAs to reference RNA rings coming from a primitive genome whose structure is described as solution of a variational problem.
Citation:
Jacques Demongeot, Andres Moreira, "A Circular Hamming Distance, Circular Gumbel Distribution, RNA Relics and Primitive Genome," ainaw, vol. 1, pp.719-726, 21st International Conference on Advanced Information Networking and Applications Workshops (AINAW'07), 2007
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