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20th International Conference on Advanced Information Networking and Applications - Volume 1 (AINA'06)
An Integrated Information System for Protein Identification
Vienna, Austria
April 18-April 20
ISBN: 0-7695-2466-4
ASCII Text
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Hui-Huang Hsu, Chao-Hsun Yang, Cheng-Wei Hsieh, Chien-Chung Cheng, "An Integrated Information System for Protein Identification," Advanced Information Networking and Applications, International Conference on, vol. 1, pp. 191-198, 20th International Conference on Advanced Information Networking and Applications - Volume 1 (AINA'06), 2006.
 
 
BibTex
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@article{ 10.1109/AINA.2006.91,
author = {Hui-Huang Hsu and Chao-Hsun Yang and Cheng-Wei Hsieh and Chien-Chung Cheng},
title = {An Integrated Information System for Protein Identification},
journal ={Advanced Information Networking and Applications, International Conference on},
volume = {1},
year = {2006},
issn = {1550-445X},
pages = {191-198},
doi = {http://doi.ieeecomputersociety.org/10.1109/AINA.2006.91},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Advanced Information Networking and Applications, International Conference on
TI - An Integrated Information System for Protein Identification
SN - 1550-445X
SP191
EP198
A1 - Hui-Huang Hsu,
A1 - Chao-Hsun Yang,
A1 - Cheng-Wei Hsieh,
A1 - Chien-Chung Cheng,
PY - 2006
KW - null
VL - 1
JA - Advanced Information Networking and Applications, International Conference on
ER -
 
Hui-Huang Hsu, Department of Computer Science and Information Engineering, Tamkang University, Taipei, Taiwan
Chao-Hsun Yang, Department of Computer Science and Information Engineering, Tamkang University, Taipei, Taiwan
Cheng-Wei Hsieh, Department of Computer Science and Information Engineering, Tamkang University, Taipei, Taiwan
Chien-Chung Cheng, Department of Chemistry and Graduate Institute of Life Sciences Tamkang University, Taipei, Taiwan
To separate and identify proteins within one cell, the bio-researcher needs to go through a process with three phrases: 2D gel electrophoresis, mass spectrometer analysis, and online matching. Various tools are used during each phase and resulted data are recorded. However, the data generated by different tools are put in files of different formats. It is hard for the researcher to manage the data from different experiments. It is also difficult for the data to be shared and further analyzed. In this paper, an integrated information system developed for such a protein identification process is introduced. The system integrates all the data, including 2D gel electrophoresis images, XML data about the protein spots on the images, peak data of protein fragments, and online matching settings and results. With this online database management system, researchers can easily record and share their experimental results through the Internet. This will facilitate the proteomics research
Citation:
Hui-Huang Hsu, Chao-Hsun Yang, Cheng-Wei Hsieh, Chien-Chung Cheng, "An Integrated Information System for Protein Identification," aina, vol. 1, pp.191-198, 20th International Conference on Advanced Information Networking and Applications - Volume 1 (AINA'06), 2006
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