| | This Article | |
| |
| |
| | Share | |
| |
| |
| | Bibliographic References | |
| |
| |
| | Add to: | |
| |
 Digg
 Furl
 Spurl
 Blink
 Simpy
 Google
 Del.icio.us
 Y!MyWeb
| |
| | Search | |
| |
| |
| | |
Interactive Volume Rendering of Thin Thread Structures within Multivalued Scientific Data Sets
November/December 2004 (vol. 10 no. 6)
pp. 664-672
We present a threads and halos representation for interactive volume rendering of vector-field structure and describe a number of additional components that combine to create effective visualizations of multivalued 3D scientific data. After filtering linear structures, such as flow lines, into a volume representation, we use a multilayer volume rendering approach to simultaneously display this derived volume along with other data values. We demonstrate the utility of threads and halos in clarifying depth relationships within dense renderings and we present results from two scientific applications: visualization of second-order tensor valued magnetic resonance imaging (MRI) data and simulated 3D fluid flow data. In both application areas, the interactivity of the visualizations proved to be important to the domain scientists. Finally, we describe a PC-based implementation of our framework along with domain specific transfer functions, including an exploratory data culling tool, that enable fast data exploration.
[1] 664 F.P. Brooks, The Computer Scientist as Toolsmith II Comm. ACM, vol. 39, no. 3, pp. 61-68, 1996.[2] H. Hauser, L. Mroz, G.I. Bischi, and M.E. Groeller, Two-Level Volume Rendering IEEE Trans. Visualization and Computer Graphics, vol. 7, no. 3, pp. 242-252, July-Sept. 2001.[3] C. Pierpaoli and P. Basser, Toward a Quantitative Assessment of Diffusion Anisotropy Magnetic Resonance Magazine, pp. 893-906, 1996.[4] D.H. Laidlaw, E.T. Ahrens, D. Kremers, M.J. Avalos, C. Readhead, and R.E. Jacobs, Visualizing Diffusion Tensor Images of the Mouse Spinal Cord Proc. Visualization '98, 1998.[5] G.L. Kindlmann and D.M. Weinstein, Hue-Balls and Lit-Tensors for Direct Volume Rendering of Diffusion Tensor Fields Proc. IEEE Visualization '99, pp. 183-190, 1999.[6] T. Delmarcelle and L. Hesselink, "Visualizing Second-Order Tensor Fields with Hyperstreamlines," IEEE Computer Graphics and Applications, vol. 13, no. 4, pp. 25-33, 1993.[7] D.M. Weinstein, G.L. Kindlmann, and E.C. Lundberg, Tensorlines: Advection-Diffusion Based Propagation through Diffusion Tensor Fields Proc. IEEE Visualization '99, pp. 249-254, 1999.[8] L. Zhukov and A.H. Barr, Oriented Tensor Reconstruction: Tracing Neural Pathways from Diffusion Tensor MRI Proc. IEEE Visualization 2002, pp. 387-394, 2002.[9] P.J. Basser, S. Pajevic, C. Pierpaoli, J. Duda, and A. Aldroubi, In Vivo Fiber Tractography Using DT-MRI Data Magnetic Resonance in Medicine, vol. 44, pp. 625-632 2000.[10] S. Zhang, C.T. Curry, D.S. Morris, and D.H. Laidlaw, Streamtubes and Streamsurfaces for Visualizing Diffusion Tensor MRI Volume Images Works in Progress IEEE Visualization 2000, 2000.[11] V. Interrante and C. Grosch, “Strategies for Effectively Visualizing 3D Flow with Volume LIC,” Proc. IEEE Visualization 97, pp. 421-424, 1997.[12] M. Zöckler, D. Stalling, and H.-C. Hege, Interactive Visualization of 3D-Vector Fields Using Illuminated Streamlines Proc. IEEE Visualization '96, pp. 107-113, 1996.[13] G. Li, U. Bordoloi, and H. Shen, Chameleon: An Interactive Texture-Based Rendering Framework for Visualizing Three-Dimensional Vector Fields Proc. IEEE Visualization '03, Oct. 2003.[14] B. Cabral, N. Cam, and J. Foran, Accelerated Volume Rendering and Tomographic Reconstruction Using Texture Mapping Hardware Proc. ACM Symp. Volume Visualization, pp. 91-98, 1994.[15] Y. Wu, V. Bhatia, H. Lauer, and L. Seiler, Shear-Image Order Ray Casting Volume Rendering Proc. 2003 Symp. Interactive 3D Graphics, pp. 152-162, 2003.[16] S. Parker, M. Parker, Y. Livnat, P.-P. Sloan, C. Hansen, and P. Shirley, Interactive Ray Tracing for Volume Visualization IEEE Trans. Visualization and Computer Graphics, vol. 5, no. 3, pp. 238-250, July-Sept. 1999.[17] J.M. Kniss, G.L. Kindlmann, and C. Hansen, Multidimensional Transfer Functions for Interactive Volume Rendering IEEE Trans. Visualization and Computer Graphics, vol. 8, no. 3, pp. 270-285, July-Sept. 2002.[18] J.M. Kniss, C. Hansen, M. Grenier, and T. Robinson, Volume Rendering Multivariate Data to Visualize Meteorological Simulations: A Case Study Proc. Eurographics IEEE TCVG Symp. Visualization, pp. 189-194, 2002.[19] E.B. Lum and K.-L. Ma, Hardware-Accelerated Parallel Non-Photorealistic Volume Rendering Proc. Non-Photorealistic Animation and Rendering Conf., pp. 67-74, 2002.[20] A. Stompel, E.B. Lum, and K.-L. Ma, Visualization of Multidimensional, Multivariate Volume Data Using Hardware-Accelerated Non-Photorealistic Rendering Techniques Proc. 10th Pacific Conf. Computer Graphics and Applications (PG '02), p. 394, 2002.[21] J.T. Kajiya and T.L. Kay, Rendering Fur with Three Dimensional Textures Proc. SIGGRAPH '89, pp. 271-280, 1989.[22] J.E. Lengyel, Real-Time Fur Proc. Eurographics Rendering Workshop 2000, pp. 243-256, 2000.[23] D.C. Banks, Illumination in Diverse Codimensions Proc. SIGGRAPH '94, pp. 327-334, 1994.[24] X. Wei, A. Kaufman, and T.J. Hallman, Case Study: Visualization of Particle Track Data Proc. IEEE Visualization 2001, pp. 465-468, 2001.[25] H. Doleisch, M. Gasser, and H. Hauser, Interactive Feature Specification for focus+context Visualization of Complex Simulation Data Proc. Symp. Data Visualisation 2003, pp. 239-248, 2003.[26] S. Zhang, Ç. Demiralp, and D.H. Laidlaw, Visualizing Diffusion Tensor MR Images Using Streamtubes and Streamsurfaces IEEE Trans. Visualization and Computer Graphics, vol. 9, no. 4, pp. 545-462, Oct.-Dec. 2003.[27] C.-F. Westin, S. Peled, H. Gubjartsson, R. Kikinis, and F.A. Jolesz, Geometrical Diffusion Measures for MRI from Tensor Basis Analysis Proc. Int'l Symp. Magentic Resonance in Medicine (ISMRM) 1997, p. 1742, 1997.[28] S. Zhang, Ç. Demiralp, D. Keefe, M. DaSilva, B.D. Greenberg, P.J. Basser, C. Pierpaoli, E.A. Chiocca, T.S. Deisboeck, and D. Laidlaw, An Immersive Virtual Environment for DT-MRI Volume Visualization Applications: A Case Study Proc. IEEE Visualization '01, pp. 437-440, Oct. 2001.[29] S. Zhang, M.E. Bastin, D.H. Laidlaw, S. Sinha, P.A. Armitage, and T.S. Deisboeck, Visualization and Analysis of White Matter Structural Asymmetry in Diffusion Tensor MR Imaging Data Magnetic Resonance in Medicine, vol. 51, no. 1, pp. 140-147, 2004.
Index Terms:
Scientific visualization, diffusion tensor imaging (DTI), fluid flow visualization, medical imaging, direct volume rendering, volume graphics, volume shading, multitextures, PC graphics hardware.
Citation:
Andreas Wenger, Daniel F. Keefe, Song Zhang, David H. Laidlaw, "Interactive Volume Rendering of Thin Thread Structures within Multivalued Scientific Data Sets," IEEE Transactions on Visualization and Computer Graphics, vol. 10, no. 6, pp. 664-672, Nov./Dec. 2004, doi:10.1109/TVCG.2004.46
