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14th International Workshop on Database and Expert Systems Applications (DEXA'03)
Having a BLAST: Analyzing Gene Sequence Data with BlastQuest
Prague, Czech Republic
September 01-September 05
ISBN: 0-7695-1993-8
ASCII Text
x 
 
William G. Farmerie, Joachim Hammer, Li Liu, Markus Schneider, "Having a BLAST: Analyzing Gene Sequence Data with BlastQuest," Database and Expert Systems Applications, International Workshop on, pp. 37, 14th International Workshop on Database and Expert Systems Applications (DEXA'03), 2003.
 
 
BibTex
x
 
@article{ 10.1109/DEXA.2003.1231995,
author = {William G. Farmerie and Joachim Hammer and Li Liu and Markus Schneider},
title = {Having a BLAST: Analyzing Gene Sequence Data with BlastQuest},
journal ={Database and Expert Systems Applications, International Workshop on},
volume = {0},
year = {2003},
issn = {1529-4188},
pages = {37},
doi = {http://doi.ieeecomputersociety.org/10.1109/DEXA.2003.1231995},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Database and Expert Systems Applications, International Workshop on
TI - Having a BLAST: Analyzing Gene Sequence Data with BlastQuest
SN - 1529-4188
SP
EP
A1 - William G. Farmerie,
A1 - Joachim Hammer,
A1 - Li Liu,
A1 - Markus Schneider,
PY - 2003
KW - null
VL - 0
JA - Database and Expert Systems Applications, International Workshop on
ER -
 
William G. Farmerie, University of Florida
Joachim Hammer, University of Florida
Li Liu, University of Florida
Markus Schneider, University of Florida
An essential problem for biologists is the processing and evaluation of BLAST results. We advocate the deployment of database technology and describe a user-driven tool, called BlastQuest. BlastQuest provides interactive, Web-enabled query, analysis, and visualization facilities beyond what is possible by current BLAST interfaces. Specifically, the BLAST results are extracted, structured, and stored persistently in a relational database to support a series of built-in analysis operations that can be used to select, filter, and order data from multiple BLAST results efficiently and without referring to the original results. Users have the option to interact with BlastQuest through a forms-based interface.
Citation:
William G. Farmerie, Joachim Hammer, Li Liu, Markus Schneider, "Having a BLAST: Analyzing Gene Sequence Data with BlastQuest," dexa, pp.37, 14th International Workshop on Database and Expert Systems Applications (DEXA'03), 2003
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