Preface

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Comparison of Two Schemes for Automatic Keyword Extraction from MEDLINE for Functional Gene Clustering (Abstract)

Ying Liu, Georgia Institute of Technology

Brian J. Ciliax, Emory University

Karin Borges, Emory University

Venu Dasigi, Southern Polytechnic State University

Ashwin Ram, Georgia Institute of Technology

Shamkant B. Navathe, Georgia Institute of Technology

Ray Dingledine, Emory University

pp. 394-404

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Exploring Genomic Context Patterns for Rhodobacter Sphaeroides in the HERBE Knowledge Discovery Environment (PDF)

Heidi J. Sofia, Pacific Northwest National Laboratory

Abigail L. Corrigan, Pacific Northwest National Laboratory

Kyle R. Klicker, Pacific Northwest National Laboratory

George Chin, Pacific Northwest National Laboratory

Eric G. Stephan, Pacific Northwest National Laboratory

pp. 462-463

Development of a Knowledge-Based Multi-Scheme Cancer Microarray Data Analysis System (PDF)

John H. Phan, Georgia Institute of Technology and Emory University

Chang F. Quo, Georgia Institute of Technology and Emory University

Kejiao Guo, Georgia Institute of Technology and Emory University

Weimin Feng, Georgia Institute of Technology and Emory University

Geoffrey Wang, Georgia Institute of Technology

May D. Wang, Georgia Institute of Technology and Emory University

pp. 474-475

GeneTide: Terra Incognita Discovery Endeavor Mining ESTs and Expression Data to Elucidate Known and De-Novo GeneCards Genes (PDF)

Maxim Shklar, Weizmann Institute of Science

Orit Shmueli, Weizmann Institute of Science

Liora Strichman-Almashanu, Weizmann Institute of Science

Michael Shmoish, Weizmann Institute of Science

Doron Lancet, Weizmann Institute of Science

Marilyn Safran, Weizmann Institute of Science

pp. 478-479

Probability Profile Method — New Approach to Data Analysis in Tandem Mass Spectrometry (Abstract)

Andrey Gorin, Oak Ridge National Laboratory

Robert M. Day, Oak Ridge National Laboratory

Andrey Borziak, Oak Ridge National Laboratory

Michael B. Strader, Oak Ridge National Laboratory

Gregory B. Hurst, Oak Ridge National Laboratory

Tema Fridman, Oak Ridge National Laboratory

pp. 499-502

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EcMLST: An Online Database for Multi Locus Sequence Typing of Pathogenic Escherichia coli (PDF)

Weihong Qi, Michigan State University

David W. Lacher, Michigan State University

Alyssa C. Bumbaugh, Michigan State University

Katie E. Hyma, Michigan State University

Lindsey M. Ouellette, Michigan State University

Teresa M. Large, Michigan State University

Cheryl L. Tarr, Michigan State University

Thomas S. Whittam, Michigan State University

pp. 520-521

Gene Recovery of Two Genome-Filtration Sequencing Techniques When Applied to the Maize Genome (PDF)

Xiequn Xu, Donald Danforth Plant Science Center

W. Bradley Barbazuk, Donald Danforth Plant Science Center

Yucheng Feng, Donald Danforth Plant Science Center

Karel Schubert, Donald Danforth Plant Science Center

Agnes P. Chan, The Institute of Genomics Research

Geo Pertea, The Institute of Genomics Research

Li Zheng, The Institute of Genomics Research

Foo Cheung, The Institute of Genomics Research

Yuandan Lee, The Institute of Genomics Research

pp. 594-595

A New Hierarchical Method for Identification of Dynamic Regulatory Pathways from Time-Series DNA Microarray Data (PDF)

Alireza Darvish, University of North Carolina at Charlotte

E. Bak, University of North Carolina at Charlotte

K. Gopalakrishnan, University of North Carolina at Charlotte

R. H. Zadeh, University of North Carolina at Charlotte

Kayvan Najarian, University of North Carolina at Charlotte

pp. 602-603

Computational Construction of Nitrogen Assimilation Pathway in Cyanobacteria Synechococcus sp. WH8102 (PDF)

Z. Su, University of Georgia and Oak Ridge National Laboratory

P. Dam, University of Georgia and Oak Ridge National Laboratory

X. Chen, University of California at Riverside

V. Olman, University of Georgia and Oak Ridge National Laboratory

T. Jiang, University of California at Riverside

Y. Xu, University of Georgia and Oak Ridge National Laboratory

pp. 640-641

Pathway Mapping with Operon Information: An Integer-Programming Method (PDF)

Fenglou Mao, University of Georgia and Oak Ridge National Laboratory

Zhengchang Su, University of Georgia and Oak Ridge National Laboratory

Victor Olman, University of Georgia and Oak Ridge National Laboratory

David Chuang, University of Georgia and Oak Ridge National Laboratory

Ying Xu, University of Georgia and Oak Ridge National Laboratory

pp. 642-643

Analysis of Signaling Pathways in Human T-Cells Using Bayesian Network Modeling of Single Cell Data (PDF)

Karen Sachs, Massachusetts Institute of Technology

Omar D. Perez, Stanford University School of Medicine

Dana Pe?er, Harvard Medical School

Garry P. Nolan, Stanford University School of Medicine

David K. Gifford, Massachusetts Institute of Technology

Tommi S. Jaakkola, Massachusetts Institute of Technology

Douglas A. Lauffenburger, Massachusetts Institute of Technology

pp. 644