A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures

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CSB
2004
2004 IEEE Computational Systems Bioinformatics Conference (CSB'04)
Abstract - A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures

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2004 IEEE Computational Systems Bioinformatics Conference (CSB'04)

A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures (PDF)

Stanford, California

August 16-August 19

ISBN: 0-7695-2194-0

	ASCII Text	x
	Todd Taylor, Iosif Vaisman, "A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures," Computational Systems Bioinformatics Conference, International IEEE Computer Society, pp. 706-707, 2004 IEEE Computational Systems Bioinformatics Conference (CSB'04), 2004.

	BibTex	x
	@article{ 10.1109/CSB.2004.1332553, author = {Todd Taylor and Iosif Vaisman}, title = {A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures}, journal ={Computational Systems Bioinformatics Conference, International IEEE Computer Society}, volume = {0}, year = {2004}, isbn = {0-7695-2194-0}, pages = {706-707}, doi = {http://doi.ieeecomputersociety.org/10.1109/CSB.2004.1332553}, publisher = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, }

	RefWorks Procite/RefMan/Endnote	x
	TY - CONF JO - Computational Systems Bioinformatics Conference, International IEEE Computer Society TI - A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures SN - 0-7695-2194-0 SP706 EP707 A1 - Todd Taylor, A1 - Iosif Vaisman, PY - 2004 KW - null VL - 0 JA - Computational Systems Bioinformatics Conference, International IEEE Computer Society ER -

Todd Taylor, George Mason University

Iosif Vaisman, George Mason University

DOI Bookmark: http://doi.ieeecomputersociety.org/10.1109/CSB.2004.1332553

A five element descriptor derived from the Delaunay tessellation of a protein structure can be assigned to each residue in the protein. The descriptor characterizes main chain topology in the neighborhood of the residue. Rules which accurately map it to the DSSP secondary structure assignment can be devised, which is surprising because the descriptor does not explicitly depend on any angles, lengths, areas, or putative hydrogen bonds, nor does it contain information or internal residue geometry.

Citation:

Todd Taylor, Iosif Vaisman, "A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures," csb, pp.706-707, 2004 IEEE Computational Systems Bioinformatics Conference (CSB'04), 2004

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