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Second International Workshop on Challenges of Large Applications in Distributed Environments
SIBIOS: A System for the Integration of Bioinformatics Services
Honolulu, Hawaii
June 07-June 07
ISBN: 0-7695-2115-0
ASCII Text
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Zina Ben Miled, Ning Gao, Omran Bukhres, Lingma Lu, Nianhua Li, Yue He, Malika Mahoui, Jessica Chen, "SIBIOS: A System for the Integration of Bioinformatics Services," Challenges of Large Applications in Distributed Environments, International Workshop on, pp. 74, Second International Workshop on Challenges of Large Applications in Distributed Environments, 2004.
 
 
BibTex
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@article{ 10.1109/CLADE.2004.1309094,
author = {Zina Ben Miled and Ning Gao and Omran Bukhres and Lingma Lu and Nianhua Li and Yue He and Malika Mahoui and Jessica Chen},
title = {SIBIOS: A System for the Integration of Bioinformatics Services},
journal ={Challenges of Large Applications in Distributed Environments, International Workshop on},
volume = {0},
year = {2004},
isbn = {0-7695-2115-0},
pages = {74},
doi = {http://doi.ieeecomputersociety.org/10.1109/CLADE.2004.1309094},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
x 
 
TY - CONF
JO - Challenges of Large Applications in Distributed Environments, International Workshop on
TI - SIBIOS: A System for the Integration of Bioinformatics Services
SN - 0-7695-2115-0
SP
EP
A1 - Zina Ben Miled,
A1 - Ning Gao,
A1 - Omran Bukhres,
A1 - Lingma Lu,
A1 - Nianhua Li,
A1 - Yue He,
A1 - Malika Mahoui,
A1 - Jessica Chen,
PY - 2004
KW - bioinformatics
KW - service integration
KW - web-based applications
KW - dynamic workflow
VL - 0
JA - Challenges of Large Applications in Distributed Environments, International Workshop on
ER -
 
Zina Ben Miled, IUPUI, Indianapolis, IN
Ning Gao, IUPUI, Indianapolis, IN
Omran Bukhres, IUPUI, Indianapolis, IN
Lingma Lu, IUPUI, Indianapolis, IN
Nianhua Li, IUPUI, Indianapolis, IN
Yue He, IUPUI, Indianapolis, IN
Malika Mahoui, IUPUI, Indianapolis, IN
Jessica Chen, IUPUI, Indianapolis, IN
Modern biological and chemical studies rely on life science databases as well as sophisticated software tools (e.g., homology search tools, modeling and visualization tools). These tools often have to be combined and integrated in order to support a given study. SIBIOS (System for the Integration of Bioinformatics Services) serves this purpose. The services are both life science database search services and software tools. The task engine is the core component of SIBIOS. It supports the execution of dynamic workflows that incorporate multiple bioinformatics services. The architecture of SIBIOS, the approaches used to address the heterogeneity as well as interoperability of bioinformatics services, including data integration are presented in this paper.
Index Terms:
bioinformatics, service integration, web-based applications, dynamic workflow
Citation:
Zina Ben Miled, Ning Gao, Omran Bukhres, Lingma Lu, Nianhua Li, Yue He, Malika Mahoui, Jessica Chen, "SIBIOS: A System for the Integration of Bioinformatics Services," clade, pp.74, Second International Workshop on Challenges of Large Applications in Distributed Environments, 2004
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