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Fourth IEEE Symposium on Bioinformatics and Bioengineering (BIBE'04)
Genome-Wide Alternative Splicing Events Detection through Analysis of Large Scale ESTs
Taichung, Taiwan, ROC
May 19-May 21
ISBN: 0-7695-2173-8
F. R. Hsu, Taichung Healthcare & Management University; Taichung Healthcare & Management University
Hwan-You Chang, National Tsing-Hua University, Hsin-chu, Taiwan
Yaw-Lin Lin, Providence University
Yin-Te Tsai, Providence University
Hui-Ling Peng, National Chiao-Tung University
Ying Tsong Chen, National Chiao-Tung University
Che Feng Chen, Taichung Healthcare & Management University
Chia Yang Cheng, Taichung Healthcare & Management University
Chia-Hung Liu, Taichung Healthcare & Management University
Min Yao Shih, Taichung Healthcare & Management University
In the past several years, the analysis of alternative splicing and its application to identify the origins of disease has been gaining momentum. Therefore, we developed a value added transcriptome database (Avatar). We maped EST (expressed sequence tag) and mRNA sequences onto whole human genomic sequence. We identified 9,937 alternative splicing relationships genes through an analysis of large-scale ESTs. Besides, we provided alternative splicing information for six organisms: Homo sapiens, Mus musculus, Rattus norvegicus, Caenorhabditis elegans, Drosophila melanogaster and Arabidopsis thaliana.
Citation:
F. R. Hsu, Hwan-You Chang, Yaw-Lin Lin, Yin-Te Tsai, Hui-Ling Peng, Ying Tsong Chen, Che Feng Chen, Chia Yang Cheng, Chia-Hung Liu, Min Yao Shih, "Genome-Wide Alternative Splicing Events Detection through Analysis of Large Scale ESTs," bibe, pp.310, Fourth IEEE Symposium on Bioinformatics and Bioengineering (BIBE'04), 2004
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