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IEEE/ACM Transactions on Computational Biology and Bioinformatics
Jan.-Feb. 2013 (vol. 10 no. 1)
ISSN: 1545-5963
Table of Contents
Front Covers
Editorial
Survey Papers
Shubhra Sankar Ray, Center for Soft Comput. Res.: A Nat. Facility, Indian Stat. Inst., Kolkata, India
Sankar K. Pal, Center for Soft Comput. Res.: A Nat. Facility, Indian Stat. Inst., Kolkata, India
pp. 2-17
Regular Papers
Teresa Piovesan, Dept. of Knowledge Eng. (DKE), Maastricht Univ., Maastricht, Netherlands
Steven M. Kelk, Dept. of Knowledge Eng. (DKE), Maastricht Univ., Maastricht, Netherlands
pp. 18-25
Inken Wohlers, Genominformatik, Univ. Duisburg-Essen/ Universitatsklinikum, Essen, Germany
Rumen Andonov, INRIA Rennes - Bretagne Atlantique, Rennes, France
Gunnar W. Klau, Life Sci. Group, Centrum Wiskunde & Inf., Amsterdam, Netherlands
pp. 26-36
Carlos H. A. Higa, Coll. of Comput., Fed. Univ. of Mato Grosso do Sul, Campo Grande, Brazil
Tales P. Andrade, Inst. of Math. & Stat., Univ. of Sao Paulo, Sao Paulo, Brazil
Ronaldo F. Hashimoto, Inst. of Math. & Stat., Univ. of Sao Paulo, Sao Paulo, Brazil
pp. 37-49
D. Muraro, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
U. Voss, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
M. Wilson, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
M. Bennett, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
H. Byrne, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
I. De Smet, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
C. Hodgman, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
J. King, Centre for Plant Integrative Biol., Univ. of Nottingham, Loughborough, UK
pp. 50-60
Cuong V. Than, Dept. of Comput. Sci., Univ. of Tuebingen, Tubingen, Germany
Noah A. Rosenberg, Dept. of Biol., Stanford Univ., Stanford, CA, USA
pp. 61-72
Peter Boyen, Hasselt Univ. & Transnat., Univ. of Limburg, Diepenbeek, Belgium
Frank Neven, Hasselt Univ. & Transnat., Univ. of Limburg, Diepenbeek, Belgium
Dries van Dyck, Adv. Nucl. Syst., Nucl. Syst. Res., Belgian Nucl. Res. Centre (SCK-CEN), Mol, Belgium
Felipe L. Valentim, Appl. Bioinf., Plant Res. Int., Wageningen, Netherlands
Aalt D. J. van Dijk, Appl. Bioinf., Plant Res. Int., Wageningen, Netherlands
pp. 73-86
Jagath C. Rajapakse, Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
Piyushkumar A. Mundra, Bioinf. Res. Center, Nanyang Technol. Univ., Singapore, Singapore
pp. 87-97
Ye Yang, Bank of Nova Scotia (Scotiabank), Toronto, ON, Canada
Farnoosh Abbas Aghababazadeh, Dept. of Math. & Stat., Univ. of Ottawa, Ottawa, ON, Canada
David R. Bickel, Dept. of Biochem., Univ. of Ottawa, Ottawa, ON, Canada
pp. 98-108
A. Todor, Dept. of Comput. & Inf. Sci. & Eng., Univ. of Florida, Gainesville, FL, USA
A. Dobra, Dept. of Comput. & Inf. Sci. & Eng., Univ. of Florida, Gainesville, FL, USA
T. Kahveci, Dept. of Comput. & Inf. Sci. & Eng., Univ. of Florida, Gainesville, FL, USA
pp. 109-121
Priscila Biller, Inst. of Comput.., Univ. of Campinas, Campinas, Brazil
Pedro Feijao, Inst. of Comput.., Univ. of Campinas, Campinas, Brazil
Joao Meidanis, Inst. of Comput.., Univ. of Campinas, Campinas, Brazil
pp. 122-134
A. Axenopoulos, Dept. of Comput. & Commun. Eng., Univ. of Thessaly, Volos, Greece
P. Daras, Centre for Res. & Technol. Hellas, Inf. Technol. Inst., Thessaloniki, Greece
G. E. Papadopoulos, Dept. of Biochem. & Biotechnol., Univ. of Thessaly, Larissa, Greece
E. N. Houstis, Dept. of Comput. & Commun. Eng., Univ. of Thessaly, Volos, Greece
pp. 135-150
Stefan Grunewald, CAS-MPG Partner Inst. for Comput. Biol., Shanghai, China
Andreas Spillner, Dept. of Math. & Comput. Sci., Univ. of Greifswald, Greifswald, Germany
Sarah Bastkowski, Sch. of Comput. Sci., Univ. of East Anglia, Norwich, UK
Anja Bogershausen, Dept. of Math. & Comput. Sci., Univ. of Greifswald, Greifswald, Germany
Vincent Moulton, Sch. of Comput. Sci., Univ. of East Anglia, Norwich, UK
pp. 151-160
Itziar Irigoien, Dept. of Comput. Sci. & Artificial Intell., Univ. of the Basque Country, Donostia, Spain
Francesc Mestres, Dept. of Genetics, Univ. of Barcelona, Barcelona, Spain
Concepcion Arenas, Dept. of Stat., Univ. of Barcelona, Barcelona, Spain
pp. 161-172
Xia Wu, State Key Lab. of Cognitive Neurosci. & Learning, Beijing Normal Univ., Beijing, China
Juan Li, State Key Lab. of Cognitive Neurosci. & Learning, Beijing Normal Univ., Beijing, China
Napatkamon Ayutyanont, Banner Good Samaritan PET Center, Banner Alzheimer's Inst. (BAI), Phoenix, AZ, USA
Hillary Protas, Banner Good Samaritan PET Center, Banner Alzheimer's Inst. (BAI), Phoenix, AZ, USA
William Jagust, Sch. of Public Health, Univ. of California Berkeley, Berkeley, CA, USA
Adam Fleisher, Banner Good Samaritan PET Center, Banner Alzheimer's Inst. (BAI), Phoenix, AZ, USA
Eric Reiman, Banner Good Samaritan PET Center, Banner Alzheimer's Inst. (BAI), Phoenix, AZ, USA
Li Yao, State Key Lab. of Cognitive Neurosci. & Learning, Beijing Normal Univ., Beijing, China
Kewei Chen, Banner Good Samaritan PET Center, Banner Alzheimer's Inst. (BAI), Phoenix, AZ, USA
pp. 173-180
Gui-Fang Shao, Dept. of Autom., Xiamen Univ., Xiamen, China
Fan Yang, Dept. of Autom., Xiamen Univ., Xiamen, China
Qian Zhang, Dept. of Autom., Xiamen Univ., Xiamen, China
Qi-Feng Zhou, Dept. of Autom., Xiamen Univ., Xiamen, China
Lin-Kai Luo, Dept. of Autom., Xiamen Univ., Xiamen, China
pp. 181-192
Short Papers
Alexis Lamiable, PRiSM, Univ. de Versailles-St-Quentin-en-Yvelines, Versailles, France
Franck Quessette, PRiSM, Univ. de Versailles-St-Quentin-en-Yvelines, Versailles, France
Sandrine Vial, PRiSM, Univ. de Versailles-St-Quentin-en-Yvelines, Versailles, France
Dominique Barth, PRiSM, Univ. de Versailles-St-Quentin-en-Yvelines, Versailles, France
Alain Denise, LRI, Univ. Paris-Sud, Orsay, France
pp. 193-199
Kristian Ovaska, Genome-Scale Biol. & Inst. of Biomed., Univ. of Helsinki, Helsinki, Finland
Lauri Lyly, Genome-Scale Biol. & Inst. of Biomed., Univ. of Helsinki, Helsinki, Finland
Biswajyoti Sahu, Inst. of Biomed., Univ. of Helsinki, Helsinki, Finland
Olli A. Janne, Inst. of Biomed., Physiol., Biomedicum, Univ. of Helsinki, Helsinki, Finland
Sampsa Hautaniemi, Genome-Scale Biol. & Inst. of Biomed., Univ. of Helsinki, Helsinki, Finland
pp. 200-206
Xiang Wan, Dept. of Comput. Sci., Hong Kong Baptist Univ., Hong Kong, China
Can Yang, Div. of Biostat., Yale Univ., New Haven, CT, USA
Qiang Yang, Dept. of Comput. Sci. & Eng., Hong Kong Univ. of Sci. & Technol., Hong Kong, China
Hongyu Zhao, Div. of Biostat., Yale Univ., New Haven, CT, USA
Weichuan Yu, Dept. of Electron. & Comput. Eng., Hong Kong Univ. of Sci. & Technol., Hong Kong, China
pp. 207-212
Mark Howison, Center for Comput. & Visualization, Brown Univ., Providence, RI, USA
pp. 213-218
Yuan Zhu, Dept. of Math., Guangdong Univ. of Bus. Studies, Guangzhou, China
Xiao-Fei Zhang, Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
Dao-Qing Dai, Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
Meng-Yun Wu, Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
pp. 219-225
Xiaowei Zhou, Dept. of Electron. & Comput. Eng., Hong Kong Univ. of Sci. & Technol., Hong Kong, China
Can Yang, Dept. of Biostat., Yale Univ., New Haven, CT, USA
Xiang Wan, Dept. of Comput. Sci., Hong Kong Baptist Univ., Hong Kong, China
Hongyu Zhao, Dept. of Biostat., Yale Univ., New Haven, CT, USA
Weichuan Yu, Dept. of Electron. & Comput. Eng., Hong Kong Univ. of Sci. & Technol., Hong Kong, China
pp. 230-235
Alan Joseph J. Caceres, Dept. of Math. & Comput. Sci., City Univ. of New York, New York, NY, USA
Juan Castillo, Dept. of Math. & Comput. Sci., City Univ. of New York, New York, NY, USA
Jinnie Lee, Dept. of Math. & Comput. Sci., City Univ. of New York, New York, NY, USA
Katherine St. John, Dept. of Math. & Comput. Sci., City Univ. of New York, New York, NY, USA
pp. 236-239
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