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IEEE/ACM Transactions on Computational Biology and Bioinformatics
Sept.-Oct. 2012 (vol. 9 no. 5)
ISSN: 1545-5963
Table of Contents
Front Covers
Special Section on the 10th Asia Pacific Bioinformatics Conference
Stephanus Daniel Handoko, Centre for Comput. Intell., Nanyang Technol. Univ., Singapore, Singapore
Xuchang Ouyang, Bioinf. Res. Centre, Nanyang Technol. Univ., Singapore, Singapore
Chinh Tran To Su, Bioinf. Res. Centre, Nanyang Technol. Univ., Singapore, Singapore
Chee Keong Kwoh, Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
Yew Soon Ong, Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
pp. 1266-1272
Pengyi Yang, Sch. of Inf. Technol., Univ. of Sydney, Sydney, NSW, Australia
Jie Ma, State Key Lab. of Proteomics, Beijing Inst. of Radiat. Med., Beijing, China
Penghao Wang, Sch. of Stat. & Math., Univ. of Sydney, Sydney, NSW, Australia
Yunping Zhu, State Key Lab. of Proteomics, Beijing Inst. of Radiat. Med., Beijing, China
Bing B. Zhou, Sch. of Inf. Technol., Univ. of Sydney, Sydney, NSW, Australia
Yee Hwa Yang, Sch. of Stat. & Math., Univ. of Sydney, Sydney, NSW, Australia
pp. 1273-1280
Lin Wan, Mol. & Comput. Biol. Program, Univ. of Southern California, Los Angeles, CA, USA
Fengzhu Sun, Mol. & Comput. Biol. Program, Univ. of Southern California, Los Angeles, CA, USA
pp. 1281-1292
Richard Rottger, Comput. Syst. Biol. Group, Max Planck Institutefor Inf., Saarbrucken, Germany
Ulrich Ruckert, Dept. of Electr. Eng. & Comput. Sci., Univ. of California, Berkeley, CA, USA
Jan Taubert, Dept. of Comput. & Syst. Biol., Rothamsted Res., Harpenden, UK
Jan Baumbach, Comput. Syst. Biol. Group, Max Planck Institutefor Inf., Saarbrucken, Germany
pp. 1293-1300
Special Section on the Ninth International Conference on COmputational Methods in Systems Biology
Hossam M. Ashtawy, Dept. of Electr. & Comput. Eng., Michigan State Univ., East Lansing, MI, USA
Nihar R. Mahapatra, Dept. of Electr. & Comput. Eng., Michigan State Univ., East Lansing, MI, USA
pp. 1301-1313
Jimmy Omony, Syst. & Control Group, Wageningen Univ., Wageningen, Netherlands
Astrid R. Mach-Aigner, Res. Div. Biotechnol. & Microbiol., Tech. Univ. Vienna, Vienna, Austria
Leo H. de Graaff, Lab. of Syst. & Synthetic Biol., Wageningen, Netherlands
Gerrit van Straten, Syst. & Control Group, Wageningen Univ., Wageningen, Netherlands
Anton J. B. van Boxtel, Syst. & Control Group, Wageningen Univ., Wageningen, Netherlands
pp. 1316-1325
Eugen Czeizler, Dept. of Inf. & Comput. Sci., Aalto Univ., Aalto, Finland
Vladimir Rogojin, Fac. of Med., Helsinki Univ., Helsinki, Finland
Ion Petre, Dept. of Inf. Technol., Abo Akademi Univ., Turku, Finland
pp. 1326-1337
Hannes Klarner, DFG Res. Center Matheon, Freie Univ. Berlin, Berlin, Germany
Heike Siebert, DFG Res. Center Matheon, Freie Univ. Berlin, Berlin, Germany
Alexander Bockmayr, DFG Res. Center Matheon, Freie Univ. Berlin, Berlin, Germany
pp. 1338-1351
Sucheendra K. Palaniappan, Sch. of Comput., Nat. Univ. of Singapore, Singapore, Singapore
S. Akshay, IRISA, ENS Cachan Bretagne, Rennes, France
Bing Liu, Sch. of Comput., Nat. Univ. of Singapore, Singapore, Singapore
Blaise Genest, IRISA, Rennes, France
P. S. Thiagarajan, Sch. of Comput., Nat. Univ. of Singapore, Singapore, Singapore
pp. 1352-1365
Nicola Paoletti, Sch. of Sci. & Technol., Univ. of Camerino, Camerino, Italy
Pietro Lio, Comput. Lab., Univ. of Cambridge, Cambridge, UK
Emanuela Merelli, Sch. of Sci. & Technol., Univ. of Camerino, Camerino, Italy
Marco Viceconti, Dept. of Mech. Eng., Univ. of Sheffield, Sheffield, UK
pp. 1366-1378
Regular Papers
Blaise Hanczar, LIPADE, Univ. Paris Descartes, Paris, France
Avner Bar-Hen, MAP5, Univ. Paris Descartes, Paris, France
pp. 1379-1386
Uday Kamath, Dept. of Comput. Sci., George Mason Univ., Ashburn, VA, USA
Jack Compton, Barquin Int., Alexandria, VA, USA
Rezarta Islamaj-Dogan, Nat. Center for Biotechnol. Inf. (NCBI), Nat. Inst. of Health (NIH), Bethesda, MD, USA
Kenneth A. De Jong, Dept. of Comput. Sci., George Mason Univ., Fairfax, VA, USA
Amarda Shehu, Dept. of Comput. Sci., George Mason Univ., Fairfax, VA, USA
pp. 1387-1398
Nadeem A. Ansari, Microsoft Corp., Redmond, WA, USA
Riyue Bao, Dept. of Biol. Sci., Wayne State Univ., Detroit, MI, USA
Calin Voichita, Dept. of Comput. Sci., Wayne State Univ., Detroit, MI, USA
Sorin Draghici, Dept. of Obstetrics & Gynecology, Wayne State Univ., Detroit, MI, USA
pp. 1399-1409
Tatsuya Akutsu, Inst. for Chem. Res., Kyoto Univ., Kyoto, Japan
Sven Kosub, Dept. of Comput. & Inf. Sci., Univ. of Konstanz, Konstanz, Germany
Avraham A. Melkman, Dept. of Comput. Sci., Ben-Gurion Univ. of the Negev, Beer-Sheva, Israel
Takeyuki Tamura, Inst. for Chem. Res., Kyoto Univ., Kyoto, Japan
pp. 1410-1421
Herbert Pang, Sch. of Med., Dept. of Biostat. & Bioinf., Duke Univ., Durham, NC, USA
Stephen L. George, Sch. of Med., Dept. of Biostat. & Bioinf., Duke Univ., Durham, NC, USA
Ken Hui, Sch. of Med., Dept. of Internal Med., Yale Univ., New Haven, CT, USA
Tiejun Tong, Dept. of Math., Hong Kong Baptist Univ., Kowloon Tong, China
pp. 1422-1431
Pablo H. Hennings-Yeomans, Dept. of Biomed. Inf., Univ. of Pittsburgh, Pittsburgh, PA, USA
Gregory F. Cooper, Dept. of Biomed. Inf., Univ. of Pittsburgh, Pittsburgh, PA, USA
pp. 1442-1450
Nicolas Bonnel, IRISA, Universitede Bretagne Sud, Vannes, France
Pierre-Francois Marteau, IRISA, Universitede Bretagne Sud, Vannes, France
pp. 1451-1458
Francesco Sambo, Dept. of Inf. Eng., Univ. of Padova, Padova, Italy
Marco A. Montes de Oca, Dept. of Math. Sci., Univ. of Delaware, Newark, DE, USA
Barbara Di Camillo, Dept. of Inf. Eng., Univ. of Padova, Padova, Italy
Gianna Toffolo, Dept. of Inf. Eng., Univ. of Padova, Padova, Italy
Thomas Stutzle, IRIDIA-CoDE, Univ. Libre de Bruxelles, Brussels, Belgium
pp. 1459-1471
Neil Jacklin, Dept. of Electr. & Comput. Eng., Univ. of California, Davis, CA, USA
Zhi Ding, Dept. of Electr. & Comput. Eng., Univ. of California, Davis, CA, USA
Wei Chen, Dept. of Electr. & Electron. Eng., Univ. of Hong Kong, Hong Kong, China
Chunqi Chang, State Key Lab. of Brain & Cognitive Sci., Univ. of Hong Kong, Hong Kong, China
pp. 1472-1481
Silvana Badaloni, Dept. of Inf. Eng., Univ. of Padova, Padova, Italy
Barbara Di Camillo, Dept. of Inf. Eng., Univ. of Padova, Padova, Italy
Francesco Sambo, Dept. of Inf. Eng., Univ. of Padova, Padova, Italy
pp. 1482-1491
John C. Hawkins, Struct. Bioinf., Tech. Univ. Dresden, Dresden, Germany
Hongbo Zhu, Struct. Bioinf., Tech. Univ. Dresden, Dresden, Germany
Joan Teyra, Struct. Bioinf., Tech. Univ. Dresden, Dresden, Germany
M. Teresa Pisabarro, Struct. Bioinf., Tech. Univ. Dresden, Dresden, Germany
pp. 1492-1503
Jianyong Sun, Centre for Plant Integrative Biol. (CPIB), Univ. of Nottingham, Nottingham, UK
Jonathan M. Garibaldi, Sch. of Comput. Sci., Univ. of Nottingham, Nottingham, UK
Kim Kenobi, Centre for Plant Integrative Biol. (CPIB), Univ. of Nottingham, Nottingham, UK
pp. 1504-1514
Zhi-Zhong Chen, Div. of Inf. Syst. Design, Tokyo Denki Univ., Saitama, Japan
Fei Deng, Dept. of Comput. Sci., City Univ. of Hong Kong, Kowloon, China
Lusheng Wang, Dept. of Comput. Sci., City Univ. of Hong Kong, Kowloon, China
pp. 1515-1528
Short Papers
Bo Liao, Coll. of Inf. Sci. & Eng., Hunan Univ., Changsha, China
Xiong Li, Coll. of Inf. Sci. & Eng., Hunan Univ., Changsha, China
Wen Zhu, Coll. of Inf. Sci. & Eng., Hunan Univ., Changsha, China
Zhi Cao, Coll. of Inf. Sci. & Eng., Hunan Univ., Changsha, China
pp. 1529-1534
Shaini Joseph, Biomed. Inf. Center of Indian Council of Med. Res., Nat. Inst. for Res. in Reproductive Health, Mumbai, India
Shreyas Karnik, Sch. of Inf., Indiana Univ., Marshfield, WI, USA
Pravin Nilawe, Biomed. Inf. Center of Indian Council of Med. Res., Nat. Inst. for Res. in Reproductive Health, Navi Mumbai, India
V. K. Jayaraman, Center for Dev. of Adv. Comput., Pune Univ. Campus, Pune, India
Susan Idicula-Thomas, Biomed. Inf. Center of Indian Council of Med. Res., Nat. Inst. for Res. in Reproductive Health, Mumbai, India
pp. 1535-1538
M. N. Nounou, Chem. Eng. Program, Texas A&M Univ. at Qatar, Doha, Qatar
H. N. Nounou, Electr. & Comput. Eng. Program, Texas A&M Univ. at Qatar, Doha, Qatar
N. Meskin, Dept. Electr. Eng., Qatar Univ., Doha, Qatar
A. Datta, Dept. of Electr. & Comput. Eng., Texas A&M Univ., College Station, TX, USA
E. R. Dougherty, Dept. of Electr. & Comput. Eng., Texas A&M Univ., College Station, TX, USA
pp. 1539-1545
Michael Margaliot, Sch. of Electr. Eng., Tel-Aviv Univ., Tel-Aviv, Israel
Tamir Tuller, Dept. of Biomed. Eng., Tel-Aviv Univ., Tel-Aviv, Israel
pp. 1545-1552
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