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S. J. Willson, "CSD Homomorphisms between Phylogenetic Networks," IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 9, no. 4, pp. 11281138, JulyAug., 2012.  
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@article{ 10.1109/TCBB.2012.52, author = {S. J. Willson}, title = {CSD Homomorphisms between Phylogenetic Networks}, journal ={IEEE/ACM Transactions on Computational Biology and Bioinformatics}, volume = {9}, number = {4}, issn = {15455963}, year = {2012}, pages = {11281138}, doi = {http://doi.ieeecomputersociety.org/10.1109/TCBB.2012.52}, publisher = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, }  
RefWorks Procite/RefMan/Endnote  x  
TY  JOUR JO  IEEE/ACM Transactions on Computational Biology and Bioinformatics TI  CSD Homomorphisms between Phylogenetic Networks IS  4 SN  15455963 SP1128 EP1138 EPD  11281138 A1  S. J. Willson, PY  2012 KW  molecular biophysics KW  complex networks KW  evolution (biological) KW  genetics KW  graph theory KW  network classes KW  CSD homomorphisms KW  phylogenetic networks KW  species trees KW  reality network KW  hybridization KW  gene transfer KW  connected surjective digraph map KW  Vegetation KW  Phylogeny KW  Bioinformatics KW  Computational biology KW  Topology KW  Kernel KW  Image edge detection KW  homomorphism. KW  Digraph KW  network KW  connected KW  hybrid KW  phylogeny VL  9 JA  IEEE/ACM Transactions on Computational Biology and Bioinformatics ER   
[1] H.J. Bandelt and A. Dress, "Split Decomposition: A New and Useful Approach to Phylogenetic Analysis of Distance Data," Molecular Phylogenetics and Evolution, vol. 1, pp. 242252, 1992.
[2] M. Baroni, C. Semple, and M. Steel, "A Framework for Representing Reticulate Evolution," Annals of Combinatorics, vol. 8, pp. 391408, 2005.
[3] P. Buneman, "The Recovery of Trees from Measures of Dissimilarity," Mathematics in the Archaeological and Historical Sciences, F.R. Hodson, D.G. Kendall, and P. Tautu, eds., pp. 387395, Edinburgh Univ. Press, 1971.
[4] G. Cardona, M. Llabrés, F. Rosselló, and G. Valiente, "A Distance Metric for a Class of TreeSibling Phylogenetic Networks," Bioinformatics, vol. 24, pp. 14811488, 2008.
[5] G. Cardona, F. Rosselló, and G. Valiente, "Comparison of TreeChild Phylogenetic Networks," IEEE/ACM Trans. Computational Biology and Bioinformatics, vol. 6, no. 4, pp. 552569, Oct.Dec. 2009.
[6] T. Dagan, Y. ArtzyRandrup, and W. Martin, "Modular Networks and Cumulative Impact of Lateral Transfer in Prokaryote Genome Evolution," Proc. Nat'l Academy of Sciences USA, vol. 105, pp. 1003910044, 2008.
[7] A. Daneshgar, H. Hajiabolhassan, and N. Hamedazimi, "On Connected Colourings of Graphs," Ars Combinatoria, vol. 89, pp. 115126, 2008.
[8] W.F. Doolittle and E. Bapteste, "Pattern Pluralism and the Tree of Life Hypothesis," Proc. Nat'l Academy of Sciences USA, vol. 104, pp. 20432049, 2007.
[9] A. Dress, V. Moulton, M. Steel, and T. Wu, "Species, Clusters and the "Tree of Life": A GraphTheoretic Perspective," J. Theoretical Biology, vol. 265, no. 4, pp. 535542, 2010.
[10] D. Gusfield, S. Eddhu, and C. Langley, "Optimal, Efficient Reconstruction of Phylogenetic Networks with Constrained Recombination," J. Bioinformatics and Computational Biology, vol. 2, pp. 173213, 2004.
[11] G. Hahn and C. Tardif, "Graph Homomorphisms: Structure and Symmetry," Graph Symmetry: Algebraic Methods and Applications, vol. 497, pp. 107166, 1997.
[12] P. Hell and J. Nešetřil, Graphs and Homomorphisms. Oxford Univ. Press, 2004.
[13] L.J.J. van Iersel, J.C.M. Keijsper, S.M. Kelk, L. Stougie, F. Hagen, and T. Boekhout, "Constructing Level2 Phylogenetic Networks from Triplets," IEEE/ACM Trans. Computational Biology and Bioinformatics, vol. 6, no. 43, pp. 667681, Oct.Dec. 2009.
[14] B.M.E. Moret, L. Nakhleh, T. Warnow, C.R. Linder, A. Tholse, A. Padolina, J. Sun, and R. Timme, "Phylogenetic Networks: Modeling, Reconstructibility, and Accuracy," IEEE/ACM Trans. Computational Biology and Bioinformatics, vol. 1, no. 1, pp. 1323, Jan.Mar. 2004.
[15] D.A. Morrison, "Phylogenetic Networks in Systematic Biology (and elsewhere)," Research Advances in Systematic Biology, R. Mohan, ed., pp. 148, Global Research Network, Trivandrum, India, 2010.
[16] L. Nakhleh, T. Warnow, and C.R. Linder, "Reconstructing Reticulate Evolution in SpeciesTheory and Practice," Proc. Eighth Ann. Int'l Conf. Computational Molecular Biology (RECOMB '04), pp. 337346, 2004.
[17] C. Semple and M. Steel, Phylogenetics. Oxford Univ. Press, 2003.
[18] L. Wang, K. Zhang, and L. Zhang, "Perfect Phylogenetic Networks with Recombination," J. Computational Biology, vol. 8, pp. 6978, 2001.