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IEEE/ACM Transactions on Computational Biology and Bioinformatics
May-June 2012 (vol. 9 no. 3)
ISSN: 1545-5963
Table of Contents
Special Section on the Second International Workshop on High Performance Computational Systems Biology
L. Dematte, Center for Comput. & Syst. Biol., Microsoft Res.-Univ. of Trento, Trento, Italy
pp. 655-667
Regular Papers
S. Miyano, Lab. of DNA Inf. Anal., Univ. of Tokyo, Tokyo, Japan
S. Imoto, Lab. of DNA Inf. Anal., Univ. of Tokyo, Tokyo, Japan
A. Sharma, Lab. of DNA Inf. Anal., Univ. of Tokyo, Tokyo, Japan
pp. 754-764
Dongbo Bu, Inst. of Comput. Technol., Beijing, China
Shuai Cheng Li, Dept. of Comput. Sci., City Univ. of Hong Kong, Kowloon, China
Ming Li, Sch. of Comput. Sci., Univ. of WaterlooWaterloo, Waterloo, ON, Canada
pp. 765-773
F. Barry, Nat. Centre for Biomed. Eng. Sci., Nat. Univ. of Ireland Galway, Galway, Ireland
M. J. Murphy, Nat. Centre for Biomed. Eng. Sci., Nat. Univ. of Ireland Galway, Galway, Ireland
D. Fay, Comput. Lab., Univ. of Cambridge, Cambridge, UK
M. Norkus, Electr. & Electron. Eng., Nat. Univ. of Ireland Galway, Galway, Ireland
G. Olaighin, Electr. & Electron. Eng., Nat. Univ. of Ireland Galway, Galway, Ireland
L. Kilmartin, Electr. & Electron. Eng., Nat. Univ. of Ireland Galway, Galway, Ireland
pp. 846-856
G. Armano, Dept. of Electr. & Electron. Eng., Univ. of Cagliari, Cagliari, Italy
F. Ledda, Dept. of Electr. & Electron. Eng., Univ. of Cagliari, Cagliari, Italy
pp. 799-808
L. Kamenetzky, Partner Group, Max-Planck Inst. for Mol. Plant Physiol., Castelar, Argentina
D. H. Milone, Res. Center for Signals, Syst. & Comput. Intell., FICH-UNL, Santa Fe, Argentina
G. Stegmayer, Center for R&D of Inf. Syst. (CIDISI, UTN-FRSF, Santa Fe, Argentina
M. G. Lopez, Partner Group, Max-Planck Inst. for Mol. Plant Physiol., Castelar, Argentina
F. Carrari, Partner Group, Max-Planck Inst. for Mol. Plant Physiol., Castelar, Argentina
pp. 706-716
Dao-Qing Dai, Center for Comput. Vision & Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
Xiao-Fei Zhang, Center for Comput. Vision & Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
Xiao-Xin Li, Center for Comput. Vision & Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
pp. 857-870
P. Jarvis, Sch. of Math. & Phys., Univ. of Tasmania, Hobart Tas, TAS, Australia
J. Sumner, Sch. of Math. & Phys., Univ. of Tasmania, Hobart Tas, TAS, Australia
pp. 828-836
Michael A. Mooney, Oregon Health & Science University, Portland
Beth Wilmot, Oregon Clinical and Translational Research Institute, Portland
Shannon K. McWeeney, Oregon Health & Science University, Portland
pp. 899-910
Tommaso Mazza, IRCCS Casa Sollievo della Sofferenza, Rome
Paolo Ballarini, Ecole Centrale de Paris, Chatenay-Malabry, France
Rosita Guido, University of Calabria, Arcavacata de Rende
Davide Prandi, Laboratory of Computational Oncology, Mattarello
pp. 911-923
Debarka Sengupta, Indian Statistical Institute, Kolkata
Ujjwal Maulik, Jadavpur University, Kolkata
Sanghamitra Bandyopadhyay, Indian Statistical Institute, Kolkata
pp. 924-933
Short Papers
Italo Zoppis, Università degli Studi di Milano-Bicocca, Milan
Erica Gianazza, Università degli Studi di Milano-Bicocca, Monza
Massimiliano Borsani, Università degli Studi di Milano-Bicocca, Monza
Clizia Chinello, Università degli Studi di Milano-Bicocca, Monza
Veronica Mainini, Università degli Studi di Milano-Bicocca, Monza
Carmen Galbusera, Università degli Studi di Milano-Bicocca, Monza
Carlo Ferrarese, Ospedale San Gerardo, Monza
Gloria Galimberti, Ospedale San Gerardo, Monza
Sandro Sorbi, Università degli Studi di Firenze, Florence
Barbara Borroni, Università degli Studi di Brescia, Brescia
Fulvio Magni, Università degli Studi di Milano-Bicocca, Monza
Marco Antoniotti, Università degli Studi di Milano-Bicocca, Milan
Giancarlo Mauri, Università degli Studi di Milano-Bicocca, Milan
pp. 934-939
J. Buhler, Dept. of Comput. Sci., Washington Univ., St. Louis, MO, USA
Yanni Sun, Dept. of Comput. Sci. & Eng., Michigan State Univ., East Lansing, MI, USA
Cheng Yuan, Dept. of Comput. Sci. & Eng., Michigan State Univ., East Lansing, MI, USA
pp. 774-787
Comments Papers
Denise Fagundes-Lima, Federal University of Ouro Preto, Ouro Preto
Gerald Weber, Federal University of Minas Gerais, Belo Horizonte
pp. 940-941
EIC Search
E. Czeizler, Comput. Syst. Biol. Lab., Univ. of Helsinki, Helsinki, Finland
A. Mizera, Inst. of Fundamental Technol. Res., Warsaw, Poland
E. Czeizler, Sch. of Sci., Dept. of Inf. & Comput. Sci., Aalto Univ., Aalto, Finland
R-J Back, Dept. of Inf. Technol., Abo Akademi Univ., Turku, Finland
J. E. Eriksson, Turku Centre for Biotechnol., Abo Akademi Univ., Turku, Finland
I. Petre, Dept. of Inf. Technol., Abo Akademi Univ., Turku, Finland
pp. 885-898
C. Pizzuti, Inst. for High Performance Comput. & Networking (ICAR), Nat. Res. Council of Italy (CNR), Rende, Italy
S. E. Rombo, Dept. of Electron., Comput. Sci. & Syst. (DEIS), Univ. of Calabria, Rende, Italy
pp. 717-730
D. Walker, Dept. of Comput. Sci., Univ. of Sheffield, Sheffield, UK
M. Burkitt, Dept. of Comput. Sci., Univ. of Sheffield, Sheffield, UK
D. M. Romano, Dept. of Comput. Sci., Univ. of Sheffield, Sheffield, UK
A. Fazeli, Dept. of Human Metabolism, Univ. of Sheffield, Sheffield, UK
pp. 643-654
J. Klema, Dept. of Cybern., Czech Tech. Univ. in Prague, Prague, Czech Republic
M. Krejnik, Dept. of Cybern., Czech Tech. Univ. in Prague, Prague, Czech Republic
pp. 788-798
Xiao-Fei Zhang, Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
Dao-Qing Dai, Dept. of Math., Sun Yat-Sen Univ., Guangzhou, China
pp. 740-753
N. A. Hamilton, Inst. for Mol. Biosci., Univ. of Queensland, St. Lucia, QLD, Australia
K. Burrage, Comput. Lab., Oxford Univ., Oxford, UK
A. Bustamam, Dept. of Math., Univ. of Indonesia, Depok, Indonesia
pp. 679-692
W. S. Noble, Dept. of Genome Sci., Univ. of Washington, Seattle, WA, USA
O. Serang, Dept. of Pathology, Children's Hosp. Boston, Boston, MA, USA
pp. 809-817
A. Streck, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
A. Krejci, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
L. Brim, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
J. Barnat, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
D. Safranek, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
M. Vejnar, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
T. Vejpustek, Fac. of Inf., Masaryk Univ., Brno, Czech Republic
pp. 693-705
Peng Li, Dept. of Electr. & Comput. Eng., Texas A&M Univ., College Station, TX, USA
Yong Zhang, Dept. of Electr. & Comput. Eng., Texas A&M Univ., College Station, TX, USA
Garng M. Huang, Dept. of Electr. & Comput. Eng., Texas A&M Univ., College Station, TX, USA
pp. 871-884
Hong Huang, Key Lab. on Opto-Electron. Tech. & Syst., Chongqing Univ., Chongqing, China
Hailiang Feng, Key Lab. on Opto-Electron. Tech. & Syst., Chongqing Univ., Chongqing, China
pp. 818-827
Diego di Bernardo, Telethon Inst. of Genetics & Med. (TIGEM), Naples, Italy
G. D'Angelo, Telethon Inst. of Genetics & Med. (TIGEM), Naples, Italy
M. Santoro, Telethon Inst. of Genetics & Med. (TIGEM), Naples, Italy
V. Siciliano, Telethon Inst. of Genetics & Med. (TIGEM), Naples, Italy
F. Gregoretti, Inst. of High Performance Comput. & Networking ICAR-CNR, Naples, Italy
V. Belcastro, Telethon Inst. of Genetics & Med. (TIGEM), Naples, Italy
G. Oliva, Inst. of High Performance Comput. & Networking ICAR-CNR, Naples, Italy
pp. 668-678
G. Christodoulou, Dept. of Comput. Sci., Univ. of Cyprus, Nicosia, Cyprus
V. J. Promponas, Dept. of Biol. Sci., Univ. of Cyprus, Nicosia, Cyprus
M. Agathocleous, Dept. of Comput. Sci., Univ. of Cyprus, Nicosia, Cyprus
P. Kountouris, Dept. of Comput. Sci., Univ. of Cyprus, Nicosia, Cyprus
S. Hadjicostas, Dept. of Comput. Sci., Univ. of Cyprus, Nicosia, Cyprus
V. Vassiliades, Dept. of Comput. Sci., Univ. of Cyprus, Nicosia, Cyprus
C. Christodoulou, Dept. of Comput. Sci., Univ. of Cyprus, Nicosia, Cyprus
pp. 731-739
Cheng-Huei Yang, Dept. of Electron. Commun. Eng., Nat. Kaohsiung Marine Univ., Kaohsiung, Taiwan
Yu-Huei Cheng, Dept. of Network Syst., Toko Univ., Chiayi, Taiwan
Cheng-Hong Yang, Dept. of Network Syst., Toko Univ., Chiayi, Taiwan
Li-Yeh Chuang, Dept. of Chem. Eng., I-Shou Univ., Kaohsiung, Taiwan
pp. 837-845
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