CSDL - IEEE/ACM Transactions on Computational Biology and Bioinformatics

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2007
Issue No. 3 - July-September

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IEEE/ACM Transactions on Computational Biology and Bioinformatics

July-September 2007 (vol. 4 no. 3)

ISSN: 1545-5963

Table of Contents

Editorial

Associate Editor Appreciation and Welcome (HTML)

pp. 321

Papers

Adjoint Systems for Models of Cell Signaling Pathways and their Application to Parameter Fitting (Abstract)

pp. 322-335

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CISA: Combined NMR Resonance Connectivity Information Determination and Sequential Assignment (Abstract)

Xiang Wan

Guohui Lin

pp. 336-348

ABSTRACT

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Comparing Compressed Sequences for Faster Nucleotide BLAST Searches (Abstract)

Michael Cameron

Hugh Williams

pp. 349-364

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Development of Two-Stage SVM-RFE Gene Selection Strategy for Microarray Expression Data Analysis (Abstract)

pp. 365-381

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Neuroinformatics for Genome-Wide 3-D Gene Expression Mapping in the Mouse Brain (Abstract)

Ed Lein

pp. 382-393

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Reconstructing Recombination Network from Sequence Data: The Small Parsimony Problem (Abstract)

pp. 394-402

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Regulatory Motif Discovery Using a Population Clustering Evolutionary Algorithm (Abstract)

Michael Lones

Andy Tyrrell

pp. 403-414

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Strategies for Identifying Statistically Significant Dense Regions in Microarray Data (Abstract)

pp. 415-429

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Bayesian Basecalling for DNA Sequence Analysis Using Hidden Markov Models (Abstract)

pp. 430-440

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Bidirectional Long Short-Term Memory Networks for Predicting the Subcellular Localization of Eukaryotic Proteins (Abstract)

Trias Thireou

Martin Reczko

pp. 441-446

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Compression of Annotated Nucleotide Sequences (Abstract)

Gergely Korodi

Ioan Tabus

pp. 447-457

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Computing the Hybridization Number of Two Phylogenetic Trees Is Fixed-Parameter Tractable (Abstract)

Magnus Bordewich

Charles Semple

pp. 458-466

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Effective Gene Selection Method With Small Sample Sets Using Gradient-Based and Point Injection Techniques (Abstract)

D. Huang

Tommy Chow

pp. 467-475

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High-Throughput Ligand Screening via Preclustering and Evolved Neural Networks (Abstract)

David Hecht

Gary Fogel

pp. 476-484

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Multicategory Classification Using An Extreme Learning Machine for Microarray Gene Expression Cancer Diagnosis (Abstract)

pp. 485-495

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Superiority of Spaced Seeds for Homology Search (Abstract)

Louxin Zhang

pp. 496-505

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Short Notes

Optimization Over a Class of Tree Shape Statistics (Abstract)

Frederick Matsen

pp. 506-512

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