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2013 IEEE 3rd International Conference on Computational Advances in Bio and medical Sciences (ICCABS) (2012)
Las Vegas, NV, USA
Feb. 23, 2012 to Feb. 25, 2012
ISBN: 978-1-4673-1320-9
TABLE OF CONTENTS
Papers
pp. 1-7
Pavel Pevzner , Computer Science and Engineering, University of California at San Diego, USA
pp. 1
David Sankoff , Department of Mathematics and Statistics, University of Ottawa, Canada
pp. 1
Srinivas Aluru , Dept. of Electrical and Computer Engineering, Bioinformatics and Computational Biology Program, Iowa State University, Ames, USA
pp. 1
Tanya Berger-Wolf , Department of Computer Science, University of Illinois at Chicago, USA
pp. 1
Vladimir Filkov , Department of Computer Science, UC Davis, CA, USA
pp. 1
Bjarni V. Halldorsson , School of Science and Engineering, Reykjavík University, Iceland
pp. 1
Maricel G. Kann , Department of Biological Sciences, University of Maryland, Baltimore County, Baltimore, USA
pp. 1
Gowtham Atluri , Department of Computer Science, University of Minnesota, Minneapolis, USA
Sanjoy Dey , Department of Computer Science, University of Minnesota, Minneapolis, USA
Gang Fang , Department of Computer Science, University of Minnesota, Minneapolis, USA
Sean Landman , Department of Computer Science, University of Minnesota, Minneapolis, USA
Vanja Paunic , Department of Computer Science, University of Minnesota, Minneapolis, USA
Wen Wang , Department of Computer Science, University of Minnesota, Minneapolis, USA
Michael Steinbach , Department of Computer Science, University of Minnesota, Minneapolis, USA
Vipin Kumar , Department of Computer Science, University of Minnesota, Minneapolis, USA
pp. 1-2
Roded Sharan , Blavatnik School of Computer Science, Tel Aviv University, Israel
pp. 1
Rachel O'Neill , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
Mark Longo , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
Chu Zhang , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
Sarah Trusiak , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
Laura Hall , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
Judy Brown , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
Craig Obergfell , Dept of Molecular and Cellular Biology, Center for Applied Genetics and Technology, University of Connecticut, Storrs, 06269 USA
pp. 1
Margareta Ackerman , Cheriton School of Computer Science, University of Waterloo, Canada
Dan Brown , Cheriton School of Computer Science, University of Waterloo, Canada
David Loker , Cheriton School of Computer Science, University of Waterloo, Canada
pp. 1-7
Shibdas Bandyopadhyay , Department of CISE, University of Florida, Gainesville, 32611, USA
Sartaj Sahni , Department of CISE, University of Florida, Gainesville, 32611, USA
Sanguthevar Rajasekaran , Department of CSE, University of Connecticut, Storrs, 06269, USA
pp. 1-6
Fabrizio F. Borelli , Universidade Federal do ABC, Santo André-SP, Brazil
Raphael Y. Camargo , Universidade Federal do ABC, Santo André-SP, Brazil
David C. Martins , Universidade Federal do ABC, Santo André-SP, Brazil
Beatriz Stransky , Universidade Federal do ABC, Santo André-SP, Brazil
Luiz C. S. Rozante , Universidade Federal do ABC, Santo André-SP, Brazil
pp. 1-6
Peikai Chen , Department of Electrical, and Electronic Engineering, The University of Hong Kong, China
Y. S. Hung , Department of Electrical, and Electronic Engineering, The University of Hong Kong, China
Tsz-Kwong Man , Texas Children's Cancer Center, Baylor College of Medicine, Houston, USA 77030
Ching C. Lau , Texas Children's Cancer Center, Baylor College of Medicine, Houston, USA 77030
Yubo Fan , Dept. Sys. Med. and Bioeng. (SMAB), The Methodist Hospital Research Institute, Houston, USA 77030
Stephen T.-C. Wong , Dept. Sys. Med. and Bioeng. (SMAB), The Methodist Hospital Research Institute, Houston, USA 77030
pp. 1-6
Yam Ki Cheung , Department of Computer Science, The University of Texas at Dallas, Richardson, USA
Ovidiu Daescu , Department of Computer Science, The University of Texas at Dallas, Richardson, USA
Steven Kirtzic , Department of Computer Science, The University of Texas at Dallas, Richardson, USA
Lech Papiez , Graduate School of Biomedical Sciences, The University of Texas Southwestern Medical Center at Dallas, USA
pp. 1-6
Pamela Clark , Dept. of Mathematics, Dept. of Biological Sciences, Dept. of Computer Science, Smith College, Northampton, Massachusetts 01060, USA
Jessica Grant , Dept. of Mathematics, Dept. of Biological Sciences, Dept. of Computer Science, Smith College, Northampton, Massachusetts 01060, USA
Samantha Monastra , Dept. of Mathematics, Dept. of Biological Sciences, Dept. of Computer Science, Smith College, Northampton, Massachusetts 01060, USA
Filip Jagodzinski , Department of Computer Science, University of Massachusetts, Amherst, 01003, USA
Ileana Streinu , Dept. of Mathematics, Dept. of Biological Sciences, Dept. of Computer Science, Smith College, Northampton, Massachusetts 01060, USA
pp. 1-6
Naomi Fox , Department of Computer Science, University of Massachusetts, Amherst, USA
Ileana Streinu , Department of Computer Science, Smith College, Northampton, MA, USA
pp. 1-6
Juan Carlos Francisco , Department of Mathematics and Computer Science, Wesleyan University, Middletown, Connecticut, USA
Frederick M. Cohan , Department of Biology, Wesleyan University, Middletown, Connecticut, USA
Danny Krizanc , Department of Mathematics and Computer Science, Wesleyan University, Middletown, Connecticut, USA
pp. 1-6
Jason Gallia , Computer Science Department, State University of New York at Binghamton, 13850, USA
Katelyn Lavrich , Biological Sciences Department, State University of New York at Binghamton, 13850, USA
Rachel McGough , Computer Science Department, State University of New York at Binghamton, 13850, USA
Anna Tan-Wilson , Biological Sciences Department, State University of New York at Binghamton, 13850, USA
Patrick H. Madden , Computer Science Department, State University of New York at Binghamton, 13850, USA
pp. 1-6
Arup K. Ghosh , EECS Department, University of Central Florida, Orlando, USA
Faraz Hussain , EECS Department, University of Central Florida, Orlando, USA
Sumit K. Jha , EECS Department, University of Central Florida, Orlando, USA
Christopher J. Langmead , Computer Science Department, Carnegie Mellon University, Pittsburgh, PA, USA
Susmit Jha , EECS Department, UC Berkeley, CA 94709, USA
pp. 1-6
Eren Gultepe , Dept. of Biomedical Engineering, University of California - Davis, United States of America
Hien Nguyen , Internal Medicine, University of California - Davis, United States of America
Timothy Albertson , Internal Medicine, University of California - Davis, United States of America
Ilias Tagkopoulos , Computer Science, University of California - Davis, United States of America
pp. 1-5
Mai Hamdalla , Computer Science and Engineering Department, University of Connecticut, USA
David Grant , Pharmaceutical Sciences Department, University of Connecticut, USA
Ion Mandoiu , Computer Science and Engineering Department, University of Connecticut, USA
Dennis Hill , Pharmaceutical Sciences Department, University of Connecticut, USA
Sanguthevar Rajasekaran , Computer Science and Engineering Department, University of Connecticut, USA
Reda Ammar , Computer Science and Engineering Department, University of Connecticut, USA
pp. 1-6
Ricardo Henao , Duke Institute for Genome Science & Policy, Duke University, Durham, USA
J. Will Thompson , Duke Institute for Genome Science & Policy, Duke University, Durham, USA
M. Arthur Moseley , Duke Institute for Genome Science & Policy, Duke University, Durham, USA
Geoffrey S. Ginsburg , Duke Institute for Genome Science & Policy, Duke University, Durham, USA
Lawrence Carin , Duke Institute for Genome Science & Policy, Duke University, Durham, USA
Joseph E. Lucas , Duke Institute for Genome Science & Policy, Duke University, Durham, USA
pp. 1-6
Linh Hunyh , Department of Computer Science & UC Davis Genome Center, University of California, Davis, 95620, USA
Ilias Tagkopoulos , Department of Computer Science & UC Davis Genome Center, University of California, Davis, 95620, USA
pp. 1-6
Faraz Hussain , Electrical Engineering and Computer Science Department, University of Central Florida, Orlando, USA
Raj Gautam Dutta , Electrical Engineering and Computer Science Department, University of Central Florida, Orlando, USA
Sumit Kumar Jha , Electrical Engineering and Computer Science Department, University of Central Florida, Orlando, USA
Christopher James Langmead , Computer Science Department, Carnegie Mellon University, Pittsburgh, PA, USA
Susmit Jha , EECS Department, UC Berkeley, CA, USA
pp. 1-6
Junjie Li , Department of Computer and Information Science and Engineering, University of Florida, Gainesville, 32611, USA
Sanjay Ranka , Department of Computer and Information Science and Engineering, University of Florida, Gainesville, 32611, USA
Sartaj Sahni , Department of Computer and Information Science and Engineering, University of Florida, Gainesville, 32611, USA
pp. 1-6
Yuan Li , Department of Electrical Engineering and Computer Science, University of Central Florida, Orlando, USA, 32816-2362
Shaojie Zhang , Department of Electrical Engineering and Computer Science, University of Central Florida, Orlando, USA, 32816-2362
pp. 1-6
Yuri Pirola , DISCo, Univ. degli Studi di Milano-Bicocca, Milan, Italy
Gianluca Della Vedova , Dip. Statistica, Univ. degli Studi di Milano-Bicocca, Milan, Italy
Stefano Biffani , CeRSA, Parco Tecnologico Padano, Lodi, Italy
Alessandra Stella , CeRSA, Parco Tecnologico Padano, Lodi, Italy
Paola Bonizzoni , DISCo, Univ. degli Studi di Milano-Bicocca, Milan, Italy
pp. 1-6
Ming-Chih Shih , Department of Computer Science, University of Houston, TX, USA
Shou-Hsuan Stephen Huang , Department of Computer Science, University of Houston, TX, USA
Youli Zu , Department of Pathology, Methodist Hospital, Houston, TX, USA
Rachel Donohue , Department of Pathology, Methodist Hospital, Houston, TX, USA
Chun-Che Jeff Chang , Department of Pathology, University of Central Florida, Orlando, USA
pp. 1-6
John L. Spouge , Computational Biology Branch, National Center for Biotechnology Information, Bethesda MD 20894 USA
Leonardo Marino-Ramirez , Computational Biology Branch, National Center for Biotechnology Information, Bethesda MD 20894 USA
Sergey L. Sheetlin , Computational Biology Branch, National Center for Biotechnology Information, Bethesda MD 20894 USA
pp. 1-6
Martin Strauch , Bioinformatics and Information Mining, University of Konstanz, 78457 Germany
Julia Rein , Neurobiology, University of Konstanz, 78457 Germany
C. Giovanni Galizia , Neurobiology, University of Konstanz, 78457 Germany
pp. 1-6
Andrew Thrasher , Department of Computer Science and Engineering, University of Notre Dame, IN, USA
Douglas Thain , Department of Computer Science and Engineering, University of Notre Dame, IN, USA
Scott Emrich , Department of Computer Science and Engineering, University of Notre Dame, IN, USA
Zachary Musgrave , Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, USA
pp. 1-6
Wei Zhang , Department of Computer Science and Engineering, University of Notre Dame, South Bend, Indiana 46556, USA
Erliang Zeng , Department of Computer Science and Engineering, University of Notre Dame, South Bend, Indiana 46556, USA
Dan Liu , Department of Biological Science, University of Notre Dame, South Bend, Indiana 46556, USA
Stuart Jones , Department of Biological Science, University of Notre Dame, South Bend, Indiana 46556, USA
Scott Emrich , Department of Computer Science and Engineering, University of Notre Dame, South Bend, Indiana 46556, USA
pp. 1-6
Chunfang Zheng , Department of Mathematics and Statistics, University of Ottawa, Canada
Victor A. Albert , Department of Biology, University at Buffalo, New York, USA
Eric Lyons , IPlant, Department of Plant Sciences, University of Arizona, Tucson, USA
David Sankoff , Department of Mathematics and Statistics, University of Ottawa, Canada
pp. 1-6
Cuncong Zhong , Department of EECS, University of Central Florida, Orlando, 32816, USA
Justen Andrews , Department of Biology, Indiana University, Bloomington, 47405, USA
Shaojie Zhang , Department of EECS, University of Central Florida, Orlando, 32816, USA
pp. 1-6
Khaled Dawoud , Department of Computer Science, University of Calgary, Alberta, Canada
Ala Qabaja , Department of Computer Science, University of Calgary, Alberta, Canada
Shang Gao , Department of Computer Science, University of Calgary, Alberta, Canada
Reda Alhajj , Department of Computer Science, University of Calgary, Alberta, Canada
Jon Rokne , Department of Computer Science, University of Calgary, Alberta, Canada
pp. 1
Hyekyeong Kwon , School of Life Sciences, Gwangju Institute of Science and Technology, Korea (R.O.K.)
Jang-Soo Chun , School of Life Sciences, Gwangju Institute of Science and Technology, Korea (R.O.K.)
Zee-Yong Park , School of Life Sciences, Gwangju Institute of Science and Technology, Korea (R.O.K.)
Dong-Yu Kim , School of Materials Science and Engineering, Gwangju Institute of Science and Technology, Korea (R.O.K.)
pp. 1
J. Lindsay , Computer Science & Engineering Dept., University of Connecticut, Storrs, USA
I. Mandoiu , Computer Science & Engineering Dept., University of Connecticut, Storrs, USA
H. Salooti , Computer Science Dept., Georgia State University, Atlanta, USA
A. Zelikovsky , Computer Science Dept., Georgia State University, Atlanta, USA
pp. 1
Jerlin C Merlin , Department of Computer Science, University of Connecticut, Storrs, USA
Hieu Dinh , Department of Computer Science, University of Connecticut, Storrs, USA
pp. 1
James T. Morton , Departments of Comp. Sci., Botany, and Statistics, Miami University, Oxford, Ohio, USA
Patricia Abrudan , Departments of Comp. Sci., Botany, and Statistics, Miami University, Oxford, Ohio, USA
Chun Liang , Departments of Comp. Sci., Botany, and Statistics, Miami University, Oxford, Ohio, USA
John E. Karro , Departments of Comp. Sci., Botany, and Statistics, Miami University, Oxford, Ohio, USA
pp. 1
Fabiola M. R. Pinheiro , School of Health Information Science, University of Victoria, B.C., Canada
Mu-Hsing Kuo , School of Health Information Science, University of Victoria, B.C., Canada
pp. 1
Maryam Rahimi , Department of Biomedical Engineering at Tehran University of Medical Sciences, Iran
Mohamadali Oghabiyan , Department of Biomedical Engineering at Tehran University of Medical Sciences, Iran
pp. 1
Ernur Saka , Department of Computer Engineering & Computer Science, University of Louisville, KY, USA
Eric Rouchka , Department of Computer Engineering & Computer Science, University of Louisville, KY, USA
pp. 1
Marissa Smith , Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA
Jesse Port , Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA
Jame C. Wallace , Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA
Elaine Faustman , Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA
pp. 1
Tomoya Tagami , Biosciences and Informatics, Keio University, Yokohama, 223-8522, Japan
Tsuyoshi Hachiya , Biosciences and Informatics, Keio University, Yokohama, 223-8522, Japan
Yasubumi Sakakibara , Biosciences and Informatics, Keio University, Yokohama, 223-8522, Japan
pp. 1
Paul Yenerall , Department of Biological Sciences, University of Pittsburgh, PA 15260, USA
Yuanyuan Jiang , School of Information Sciences, University of Pittsburgh, PA 15260, USA
Leming Zhou , Department of Health Information Management, University of Pittsburgh, PA 15260, USA
pp. 1
Yuan Zhang , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
Dhananjai Rao , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
Mufit Ozden , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
Jens Mueller , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
Praveen Raj Kumar , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
Chun Liang , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
John E. Karro , Departments of Comp. Sci., Botany, Tech. Services, and Statistics, Miami University, Oxford, Ohio, USA
pp. 1
Lingfei Zhi , Department of Electrical Engineering and Computer Science, University of Central Florida, Orlando, USA
Zhao Wang , Department of Electrical Engineering and Computer Science, University of Central Florida, Orlando, USA
Aman Behal , Department of Electrical Engineering and Computer Science, University of Central Florida, Orlando, USA
pp. 1
Italo Zoppis , Department of Informatics, System and Communication, University of Milano Bicocca, Italy
Massimiliano Borsani , Department of Informatics, System and Communication, University of Milano Bicocca, Italy
Erica Gianazza , Department of Experimental Medicine, University of Milano Bicocca, Italy
Clizia Chinello , Department of Experimental Medicine, University of Milano Bicocca, Italy
Giancarlo Albo , Department of Specialistic Surgical Sciences, "Ospedale Maggiore Policlinico" Foundation, Milano, Italy
Francesco Rocco , Department of Specialistic Surgical Sciences, "Ospedale Maggiore Policlinico" Foundation, Milano, Italy
Andre M. Deelder , Department of Parasitology, Leiden University Medical Center, The Netherlands
Yuri E. M. van der Burgt , Department of Parasitology, Leiden University Medical Center, The Netherlands
Marco Antoniotti , Department of Informatics, System and Communication, University of Milano Bicocca, Italy
Fulvio Magni , Department of Experimental Medicine, University of Milano Bicocca, Italy
Giancarlo Mauri , Department of Informatics, System and Communication, University of Milano Bicocca, Italy
pp. 1
Derek Aguiar , Department of Computer Science and Center for Computational Molecular Biology, Brown University, Providence, RI, USA
Sorin Istrail , Department of Computer Science and Center for Computational Molecular Biology, Brown University, Providence, RI, USA
pp. 1
Sahar Al Seesi , Computer Science and Engineering, University of Connecticut, Storrs, USA
Ion Mandoiu , Computer Science and Engineering, University of Connecticut, Storrs, USA
pp. 1
Srinivas Aluru , Dept. of Electrical and Computer Engineering, Iowa State University, Ames, USA
pp. 1
Hieu Dinh , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, USA
Sanguthevar Rajasekaran , Computer Science and Engineering Department, University of Connecticut, Storrs, 06269, USA
pp. 1
Scott Emrich , Department of Computer Science and Engineering, University of Notre Dame, IN, USA
pp. 1
Wei Li , Department of Computer Science and Engineering, University of California, Riverside, 92521, USA
Tao Jiang , Department of Computer Science and Engineering, University of California, Riverside, 92521, USA
pp. 1
Bo Liu , Department of Computer Science, Center for Bioinformatics and Computational Biology, UMIACS, University of Maryland, College Park, USA
Mihai Pop , Department of Computer Science, Center for Bioinformatics and Computational Biology, UMIACS, University of Maryland, College Park, USA
pp. 1
Nicholas Mancuso , Department of Computer Science, Georgia State University, Atlanta, 30302-3994, USA
Bassam Tork , Department of Computer Science, Georgia State University, Atlanta, 30302-3994, USA
Pavel Skums , Centers for Disease Control and Prevention, 1600 Clifton Road NE, Atlanta, Georgia 30322, USA
Lilia Ganova-Raeva , Centers for Disease Control and Prevention, 1600 Clifton Road NE, Atlanta, Georgia 30322, USA
Ion Mandoiu , Department of Computer Science & Engineering, University of Connecticut, Storrs, 06269, USA
Alex Zelikovsky , Department of Computer Science, Georgia State University, Atlanta, 30302-3994, USA
pp. 1
Serghei Mangul , Department of Computer Science, Georgia State University, Atlanta, 30303, USA
Adrian Caciula , Department of Computer Science, Georgia State University, Atlanta, 30303, USA
Ion Mandoiu , Department of Computer Science & Engineering, University of Connecticut, Storrs, 06269, USA
Alex Zelikovsky , Department of Computer Science, Georgia State University, Atlanta, 30303, USA
pp. 1
Rachel O'Neill , Molecular and Cellular Biology Dept., University of Connecticut, Storrs, 06269 USA
Ion Mandoiu , Computer Science & Engineering Dept., University of Connecticut, Storrs, 06269 USA
Mazhar I. Khan , Pathobiolgy Dept., University of Connecticut, Storrs, 06269 USA
Craig Obergfell , Molecular and Cellular Biology Dept., University of Connecticut, Storrs, 06269 USA
Hongjun Wang , Pathobiolgy Dept., University of Connecticut, Storrs, 06269 USA
Andrew Bligh , Biomedical Engineering Program, University of Connecticut, Storrs, 06269 USA
Bassam Tork , Computer Science Department, Georgia State University, Atlanta, 30303, USA
Nicholas Mancuso , Computer Science Department, Georgia State University, Atlanta, 30303, USA
Alexander Zelikovsky , Computer Science Department, Georgia State University, Atlanta, 30303, USA
pp. 1
Jason Pell , Computer Science and Engineering, Michigan State University, East Lansing, United States
Arend Hintze , Computer Science and Engineering, Michigan State University, East Lansing, United States
Rosangela Canino-Koning , Computer Science and Engineering, Michigan State University, East Lansing, United States
Adina Howe , Microbiology and Molecular Genetics, Michigan State University, East Lansing, United States
James M. Tiedje , Microbiology and Molecular Genetics, Michigan State University, East Lansing, United States
C. Titus Brown , Computer Science and Engineering, Michigan State University, East Lansing, United States
pp. 1-2
Onur Sakarya , Ion Torrent R&D, Life Technologies, Foster City, CA 94404 U.S.A
Heinz Breu , Ion Torrent R&D, Life Technologies, Foster City, CA 94404 U.S.A
pp. 1
Konrad Scheffler , Department of Medicine, University of California, San Diego, USA
N Lance Hepler , Department of Medicine, University of California, San Diego, USA
Martin D Smith , Department of Medicine, University of California, San Diego, USA
Wayne Delport , Prognosys Biosciences, La Jolla, CA, USA
Art FY Poon , BC Centre for Excellence in HIV/AIDS, Vancouver, British Columbia, Canada
Douglas Richman , Department of Medicine, University of California, San Diego, USA
Sergei L Kosakovsky Pond , Department of Medicine, University of California, San Diego, USA
pp. 1
Fabio Vandin , Department of Computer Science, and Center for Computational Molecular Biology, Brown University, Providence, RI, USA
Eli Upfal , Department of Computer Science, and Center for Computational Molecular Biology, Brown University, Providence, RI, USA
Benjamin J. Raphael , Department of Computer Science, and Center for Computational Molecular Biology, Brown University, Providence, RI, USA
pp. 1
Jin Zhang , Computer Science and Engineering, University of Connecticut, Storrs, USA
Yufeng Wu , Computer Science and Engineering, University of Connecticut, Storrs, USA
pp. 1
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