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2009 First International Conference on Advances in Databases, Knowledge, and Data Applications
IRCDB: A Database of Inter-residues Contacts in Protein Chains
Gosier, Guadeloupe, France
March 01-March 06
ISBN: 978-0-7695-3550-0
In protein structure prediction, identifying the inter-residue contacts is a very important task to understand the mechanism of complicated protein folding and therefore to predict three-dimensional structures of proteins. So far, many methods were developed to predict inter-residue contacts. However, no special database consisting of detailed inter-residue contacts for each PDB protein chain has been built. Our database of inter-residue contacts in protein chains consists of protein chains extracted from PDB database. For each protein chain, we analyzed its inter-residue contacts, classified it into one class, and obtained several groups of inter-residues contacts.
Citation:
Peng Chen, Chunmei Liu, Legand Burge, Mahmood Mohammad, Bill Southerland, Clay Gloster, Bing Wang, "IRCDB: A Database of Inter-residues Contacts in Protein Chains," dbkda, pp.1-6, 2009 First International Conference on Advances in Databases, Knowledge, and Data Applications, 2009
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