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Proceedings. 2005 IEEE Computational Systems Bioinformatics Conference (2005)
Stanford, CA
Aug. 8, 2005 to Aug. 11, 2005
ISBN: 0-7695-2344-7
TABLE OF CONTENTS
Workshop Abstracts
Preface (PDF)
pp. ix
Introduction
Committees (PDF)
pp. x-xi
Keynote Addresses
Invited Talks
Arthur W. Toga , University of California at Los Angeles School of Medicine
pp. 9
Genomics
Zheng Yun , Nanyang Technological University
Kwoh Chee Keong , Nanyang Technological University
pp. 13-24
Xutao Deng , University of Nebraska at Omaha
Huimin Geng , University of Nebraska - Medical Center
Hesham Ali , University of Nebraska at Omaha
pp. 25-34
Benjamin N. Jackson , Iowa State University
Srinivas Aluru , Iowa State University
Patrick S. Schnable , Iowa State University
pp. 35-43
Sun Kim , Indiana University
Jeong-Hyeon Choi , Indiana University
Jiong Yang , Case Western Reserve University
pp. 44-55
Roded Sharan , Tel-Aviv University
Bjarni V. Halldórsson , deCode Genetics
Sorin Istrail , California Institute of Technology
pp. 65-72
Hongwei Wu , University of Georgia and Oak Ridge National Laboratory
Fenglou Mao , Oak Ridge National Laboratory
Victor Olman , Oak Ridge National Laboratory
Ying Xu , University of Georgia and Oak Ridge National Laboratory
pp. 73-79
Vered Kunik , Tel Aviv University
Zach Solan , Tel Aviv University
Shimon Edelman , Cornell University
Eytan Ruppin , Tel Aviv University
David Horn , Tel Aviv University
pp. 80-85
Phylogeny and Evolution
Luay Nakhleh , Rice University
Guohua Jin , Rice University
Fengmei Zhao , Rice University
John Mellor-Crummey , Rice University
pp. 93-102
Ravi VijayaSatya , University of Central Florida
Amar Mukherjee , University of Central Florida
pp. 103-110
Transcriptomes
S. Y. Kung , Princeton University
Man-Wai Mak , Hong Kong Polytechnic University
Ilias Tagkopoulos , Princeton University
pp. 123-134
Anya Tsalenko , Agilent Technologies
Roded Sharan , Tel-Aviv University
Hege Edvardsen , University of Oslo
Vessela Kristensen , University of Oslo
Anne-Lise B?rresen-Dale , University of Oslo
Amir Ben-Dor , Agilent Technologies
Zohar Yakhini , Agilent Technologies
pp. 135-143
Will Sheffler , University of Washington
Eli Upfal , Brown University
John Sedivy , Brown University
William Stafford Noble , University of Washington
pp. 144-154
Proteomics
Dekel Tsur , University of California at San Diego
Stephen Tanner , University of California at San Diego
Ebrahim Zandi , University of Southern California
Vineet Bafna , University of California at San Diego
Pavel A. Pevzner , University of California at San Diego
pp. 157-166
Changyu Shen , Indiana University
Lang Li , Indiana University
Jake Yue Chen , Indiana University and Purdue University
pp. 167-174
Aaron A. Klammer , University of Washington
Christine C. Wu , University of Colorado
Michael J. MacCoss , University of Washington
William Stafford Noble , University of Washington
pp. 175-185
Structural Bioinformatics
Zhong Chen , University of Georgia
Ying Xu , University of Georgia
pp. 203-207
Peter M. Kasson , Stanford University
Mark M. Davis , Stanford University
Axel T. Brunger , Stanford University
pp. 208-211
Feng Gao , Rensselaer Polytechnic Institute
Mohammed J. Zaki , Rensselaer Polytechnic Institute
pp. 212-222
Yinglei Song , University of Georgia
Chunmei Liu , University of Georgia
Russell Malmberg , University of Georgia
Fangfang Pan , University of Georgia
Liming Cai , University of Georgia
pp. 223-234
Lincong Wang , Dartmouth University
Ramgopal R. Mettu , Dartmouth University
Bruce Randall Donald , Dartmouth University
pp. 235-246
Jinbo Xu , Massassachusetts Institute of Technology
Feng Jiao , University of Waterloo
Bonnie Berger , Massassachusetts Institute of Technology
pp. 247-256
Pathways and Networks
R. Nigam , Stanford University
S. Liang , University of Texas
pp. 259-267
Pengjun Pei , State University of New York at Buffalo
Aidong Zhang , State University of New York at Buffalo
pp. 268-278
Tarek S. Najdi , University of California at Irvine
Chin-Rang Yang , University of California at Irvine
Bruce E. Shapiro , California Institute of Technology
G. Wesley Hatfield , University of California at Irvine
Eric D. Mjolsness , University of California at Irvine
pp. 279-288
Ryo Yoshida , Institute of Statistical Mathematics
Seiya Imoto , University of Tokyo
Tomoyuki Higuchi , Institute of Statistical Mathematics
pp. 289-298
Applied Bioinformatic
Tu Minh Phuong , Institute of Technology - Hanoi
Zhen Lin , Stanford University
Russ B. Altman , Stanford University
pp. 301-309
Haifeng Li , University of California at Riverside
Keshu Zhang , Motorola, Inc.
Tao Jiang , University of California at Riverside
pp. 310-321
Gabriela Alexe , IBM T.J. Watson Research Center
Gyan Bhanot , IBM T.J. Watson Research Center
Babu Venkataraghavan , Institute for Advanced Study
Ramakrishna Ramaswamy , Institute for Advanced Study
Jorge Lepre , IBM T.J. Watson Research Center
Arnold J. Levine , Institute for Advanced Study and Robert Wood Johnson School of Medicine and Dentistry
Gustavo Stolovitzky , IBM T.J. Watson Research Center
pp. 322-325
Data Mining and Ontology
Chengyong Yang , Florida International University
Erliang Zeng , Florida International University
Tao Li , Florida International University
Giri Narasimhan , Florida International University
pp. 329-340
Susan L. Havre , Pacific Northwest National Laboratory
Bobbie-Jo Webb-Robertson , Pacific Northwest National Laboratory
Anuj Shah , Pacific Northwest National Laboratory
Christian Posse , Pacific Northwest National Laboratory
Banu Gopalan , Pacific Northwest National Laboratory
Fred J. Brockman , Pacific Northwest National Laboratory
pp. 341-350
Rui Mao , University of Texas at Austin
Weijia Xu , University of Texas at Austin
Smriti Ramakrishnan , University of Texas at Austin
Glen Nuckolls , University of Texas at Austin
Daniel P. Miranker , University of Texas at Austin
pp. 351-361
Mohammed I. Rafiq , Stanford Medical Informatics
Martin J. O?Connor , Stanford Medical Informatics
Amar K. Das , Stanford Medical Informatics
pp. 362-365
Nalini Polavarapu , Georgia Institute of Technology
Shamkant B. Navathe , Georgia Institute of Technology
Ramprasad Ramnarayanan , Georgia Institute of Technology
Abrar ul Haque , Georgia Institute of Technology
Saurav Sahay , Georgia Institute of Technology
Ying Liu , Georgia Institute of Technology
pp. 366-374
Miscellaneous
Tobias P. Mann , University of Washington
Richard Humbert , Regulome
William Stafford Noble , University of Washington
pp. 377-385
Author Index
Author Index (PDF)
pp. 403-404
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