CSDL - Proceedings C

Message from the General Co-Chairs (PDF)

pp. xii

Message from the Program Co-Chairs (PDF)

pp. xiii

Cluster 2003 Conference Organization Committee (PDF)

pp. xiv

Program Committee (PDF)

pp. xv

Additional Reviewers (PDF)

pp. xvi

Cluster 2003 Sponsors (PDF)

pp. xvii

Designing Next Generation Clusters with Infiniband: Opportunities and Challenges (PDF)

Tutorials

D. K. Panda, Ohio State University

pp. xviii

Using MPI-2: Advanced Features of the Message Passing Interface (PDF)

W. Gropp, Argonne National Lab

E. Lusk, Argonne National Lab

R. Ross, Argonne National Lab

R. Thakur, Argonne National Lab

pp. xix

The Gridbus Toolkit for Grid and Utility Computing (PDF)

R. Buyya, University of Melbourne

pp. xx

Building and Managing Clusters with NPACI Rocks (PDF)

G. Bruno, San Diego Supercomputer Center

M. Katz, San Diego Supercomputer Center

P. Papadopoulos, San Diego Supercomputer Center

F. Sacerdoti, San Diego Supercomputer Center

L. Liew, Singapore Computer Systems

N. Ninaba, Singapore Computer Systems

pp. xxi

Technical Session

Grid Demo — Live Demonstrations of Grid Technologies and Applications (PDF)

Peter Kacsuk, MTA SZTAKI Research Institute

Rajkumar Buyya, University of Melbourne

pp. xxii

Scheduling I

Dynamic Scheduling of Parallel Real-Time Jobs by Modelling Spare Capabilities in Heterogeneous Clusters (Abstract)

Ligang He, University of Warwick

Stephen A. Jarvis, University of Warwick

Daniel P. Spooner, University of Warwick

Graham R. Nudd, University of Warwick

pp. 2

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Parallel Job Scheduling on Multicluster Computing Systems (Abstract)

J. H. Abawajy, Carleton University

S. P. Dandamudi, Carleton University

pp. 11

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Interstitial Computing: Utilizing Spare Cycles on Supercomputers (Abstract)

Stephen D. Kleban, Sandia National Laboratories

Scott H. Clearwater, Netcom

pp. 19

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Applications

A Cluster-Based Solution for High Performance Hmmpfam Using EARTH Execution Model (Abstract)

Weirong Zhu, University of Delaware

Yanwei Niu, University of Delaware

Jizhu Lu, University of Delaware

Chuan Shen, University of Delaware

Guang R. Gao, University of Delaware

pp. 30

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Computing Large-Scale Alignments on a Multi-Cluster (Abstract)

Chunxi Chen, Nanyang Technological University

Bertil Schmidt, Nanyang Technological University

pp. 38

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Auto-CFD: Efficiently Parallelizing CFD Applications on Clusters (Abstract)

Li Xiao, Michigan State University

Xiaodong Zhang, College of William and Mary

Zhengqian Kuang, Northwestern Polytechnical University

Baiming Feng, Chinese Academy of Sciences

Jichang Kang, Northwestern Polytechnical University

pp. 46

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Performance Analysis

Performance Analysis of a Large-Scale Cosmology Application on Three Cluster Systems (Abstract)

Zhiling Lan, Illinois Institute of Technology

Prathibha Deshikachar, Illinois Institute of Technology

pp. 56

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A Performance Monitor Based on Virtual Global Time for Clusters of PCs (Abstract)

Michela Taufer, University of California at San Diego and ETH Zurich

Thomas Stricker, ETH Zurich

pp. 64

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A Distributed Performance Analysis Architecture for Clusters (Abstract)

Holger Brunst, Dresden University of Technology and University of Oregon

Wolfgang E. Nagel, Dresden University of Technology

Allen D. Malony, University of Oregon

pp. 73

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Scheduling II

Co-Ordinated Coscheduling in Time-Sharing Clusters through a Generic Framework (Abstract)

Saurabh Agarwal, IBM India Research Labs

Gyu Sang Choi, Pennsylvania State University

Chita R. Das, Pennsylvania State University

Andy B. Yoo, Lawrence Livermore National Laboratory

Shailabh Nagar, IBM T.J. Watson Research Center

pp. 84

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A Robust Scheduling Strategy for Moldable Scheduling of Parallel Jobs (Abstract)

Sudha Srinivasan, Ohio State University

Savitha Krishnamoorthy, Ohio State University

P. Sadayappan, Ohio State University

pp. 92

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Towards Load Balancing Support for I/O-Intensive Parallel Jobs in a Cluster of Workstations (Abstract)

Xiao Qin, University of Nebraska-Lincoln

Hong Jiang, University of Nebraska-Lincoln

Yifeng Zhu, University of Nebraska-Lincoln

David R. Swanson, University of Nebraska-Lincoln

pp. 100

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JavaSplit: A Runtime for Execution of Monolithic Java Programs on Heterogeneous Collections of Commodity Workstations (Abstract)

Java

Michael Factor, IBM Research Lab in Haifa

Assaf Schuster, Israel Institute of Technology

Konstantin Shagin, Israel Institute of Technology

pp. 110

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Performance Analysis of Java Message-Passing Libraries on Fast Ethernet, Myrinet and SCI Clusters (Abstract)

Guillermo L. Taboada, University of A Coruña

Juan Touriño, University of A Coruña

Ramón Doallo, University of A Coruña

pp. 118

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Compiler Optimized Remote Method Invocation (Abstract)

Ronald Veldema, University of Erlangen-Nuremberg

Michael Philippsen, University of Erlangen-Nuremberg

pp. 127

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Communication I

Optimizing Mechanisms for Latency Tolerance in Remote Memory Access Communication on Clusters (Abstract)

J. Nieplocha, Pacific Northwest National Laboratory

V. Tipparaju, Pacific Northwest National Laboratory

M. Krishnan, Pacific Northwest National Laboratory

G. Santhanaraman, Ohio State University

D. K. Panda, Ohio State University

pp. 138

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Impact of Computational Resource Reservation to the Communication Performance in the Hypercluster Environment (Abstract)

K. W. Tse, Hong Kong Polytechnic University

P. K. Lun, Hong Kong Polytechnic University

pp. 148

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Kernel Implementations of Locality-Aware Dispatching Techniques for Web Server Clusters (Abstract)

M. Di Santo, University of Sannio

N. Ranaldo, University of Sannio

E. Zimeo, University of Sannio

pp. 154

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Middleware

OptimalGrid: Middleware for Automatic Deployment of Distributed FEM Problems on an Internet-Based Computing Grid (Abstract)

Tobin J. Lehman, IBM Almaden Research Center

James H. Kaufman, IBM Almaden Research Center

pp. 164

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Adaptive Grid Resource Brokering (Abstract)

Abdulla Othman, University of Leeds

Peter Dew, University of Leeds

Karim Djemame, University of Leeds

Iain Gourlay, University of Leeds

pp. 172

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HPCM: A Pre-Compiler Aided Middleware for the Mobility of Legacy Code (Abstract)

Cong Du, Illinois Institute of Technology

Xian-He Sun, Illinois Institute of Technology

Kasidit Chanchio, Oak Ridge National Laboratory

pp. 180

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Cluster/Job Management I

The ProcessManagement Component of a Scalable Systems Software Environment (Abstract)

Ralph Butler, Middle Tennessee State University

Narayan Desai, Argonne National Laboratory

Andrew Lusk, Argonne National Laboratory

Ewing Lusk, Argonne National Laboratory

pp. 190

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Load Distribution for Heterogeneous and Non-Dedicated Clusters Based on Dynamic Monitoring and Differentiated Services (Abstract)

Hermes Senger, Universidade Católica de Santos

Liria Matsumoto Sato, Escola Politécnica - Universidade de São Paulo

pp. 199

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GridRM: An Extensible Resource Monitoring System (Abstract)

Mark Baker, University of Portsmouth

Garry Smith, University of Portsmouth

pp. 207

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I/O I

A High Performance Redundancy Scheme for Cluster File Systems (Abstract)

Manoj Pillai, Ohio State University

Mario Lauria, Ohio State University

pp. 216

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VegaFS: A Prototype for File-Sharing Crossing Multiple Administrative Domains (Abstract)

Wei Li, Chinese Academy of Sciences

Jianmin Liang, Chinese Academy of Sciences

Zhiwei Xu, Chinese Academy of Sciences

pp. 224

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Design and Performance of the Dawning Cluster File System (Abstract)

Jin Xiong, Chinese Academy of Sciences

Sining Wu, Chinese Academy of Sciences

Dan Meng, Chinese Academy of Sciences

Ninghui Sun, Chinese Academy of Sciences

Guojie Li, Chinese Academy of Sciences

pp. 232

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Novel Systems

Coordinated Checkpoint versus Message Log for Fault Tolerant MPI (Abstract)

Aurélien Bouteiller, Université de Paris Sud

Pierre Lemarinier, Université de Paris Sud

Géraud Krawezik, Université de Paris Sud

Franck Cappello, Université de Paris Sud

pp. 242

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A Performance Comparison of Linux and a Lightweight Kernel (Abstract)

Ron Brightwell, Sandia National Laboratories

Rolf Riesen, Sandia National Laboratories

Keith Underwood, Sandia National Laboratories

Trammell B. Hudson, Operating Systems Research, Inc.

Patrick Bridges, University of New Mexico

Arthur B. Maccabe, University of New Mexico

pp. 251

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Implications of a PIM Architectural Model for MPI (Abstract)

Arun Rodrigues, University of Notre Dame

Richard Murphy, University of Notre Dame

Peter Kogge, University of Notre Dame

Jay Brockman, University of Notre Dame

Ron Brightwell, Sandia National Labs

Keith Underwood, Sandia National Labs

pp. 259

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Cluster/Job Management II

Reusable Mobile Agents for Cluster Computing (Abstract)

Ichiro Satoh, National Institute of Informatics

pp. 270

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High Service Reliability for Cluster Server Systems (Abstract)

M. Mat Deris, University College of Science and Technology

M. Rabiei, University College of Science and Technology

A. Noraziah, University College of Engineering and Technology

H. M. Suzuri, University College of Science and Technology

pp. 281

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Wide Area Cluster Monitoring with Ganglia (Abstract)

Federico D. Sacerdoti, San Diego Supercomputing Center

Mason J. Katz, San Diego Supercomputing Center

Matthew L. Massie, University of California at Berkeley

David E. Culler, University of California at Berkeley

pp. 289

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Novel Software

Efficient Parallel Out-of-Core Matrix Transposition (Abstract)

Sriram Krishnamoorthy, Ohio State University

Gerald Baumgartner, Ohio State University

Daniel Cociorva, Ohio State University

Chi-Chung Lam, Ohio State University

P. Sadayappan, Ohio State University

pp. 300

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A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters (Abstract)

Yifeng Zhu, University of Nebraska-Lincoln

Hong Jiang, University of Nebraska-Lincoln

Xiao Qin, University of Nebraska-Lincoln

David Swanson, University of Nebraska-Lincoln

pp. 308

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CTFS: A New Light-Weight, Cooperative Temporary File System for Cluster-Based Web Servers (Abstract)

Jun Wang, University of Nebraska-Lincoln

pp. 316

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I/O II

Efficient Structured Data Access in Parallel File Systems (Abstract)

Avery Ching, Northwestern University

Alok Choudhary, Northwestern University

Wei-keng Liao, Northwestern University

Robert Ross, Argonne National Laboratory

William Gropp, Argonne National Laboratory

pp. 326

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View I/O: Improving the Performance of Non-Contiguous I/O (Abstract)

Florin Isaila, University of Karlsruhe

Walter F. Tichy, University of Karlsruhe

pp. 336

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Supporting Efficient Noncontiguous Access in PVFS over InfiniBand (Abstract)

Jiesheng Wu, Ohio State University

Pete Wyckoff, Ohio Supercomputer Center

Dhabaleswar Panda, Ohio State University

pp. 344

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Scheduling III

A General Self-Adaptive Task Scheduling System for Non-Dedicated Heterogeneous Computing (Abstract)

Ming Wu, Illinois Institute of Technology

Xian-He Sun, Illinois Institute of Technology

pp. 354

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Adding Memory Resource Consideration into Workload Distribution for Software DSM Systems (Abstract)

Tyng-Yeu Liang, National Kaohsiung University of Applied Sciences

Yen-Tao Liu, National Chung Kung University

Ce-Kuen Shieh, National Chung Kung University

pp. 362

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An Energy-Based Implicit Co-Scheduling Model for Beowulf Cluster (Abstract)

Somsak Sriprayoonsakul, Kasetsart University

Putchong Uthayopas, Kasetsart University

pp. 370

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High Availability

Availability Prediction and Modeling of High Availability OSCAR Cluster (Abstract)

Chokchai Leangsuksun, Louisiana Tech University

Lixin Shen, Louisiana Tech University

Tong Liu, Louisiana Tech University

Hertong Song, Louisiana Tech University

Stephen L. Scott, Oak Ridge National Laboratory

pp. 380

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A System Recovery Benchmark for Clusters (Abstract)

Ira Pramanick, Sun Microsystems, Inc.

James Mauro, Sun Microsystems, Inc.

Ji Zhu, Sun Microsystems, Inc.

pp. 387

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Performance Evaluation of Routing Algorithms in RHiNET-2 Cluster (Abstract)

Michihiro Koibuchi, Keio University

Konosuke Watanabe, Keio University

Kenichi Kono, Keio University

Akiya Jouraku, Keio University

Hideharu Amano, Keio University

pp. 395

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Communications II

Application-Bypass Reduction for Large-Scale Clusters (Abstract)

Adam Wagner, Ohio State University

Darius Buntinas, Ohio State University

Dhabaleswar K. Panda, Ohio State University

Ron Brightwell, Sandia National Laboratories

pp. 404

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Improving the Performance of MPI Derived Datatypes by Optimizing Memory-Access Cost (Abstract)

Surendra Byna, Illinois Institute of Technology

William Gropp, Argonne National Laboratory

Xian-He Sun, Illinois Institute of Technology

Rajeev Thakur, Argonne National Laboratory

pp. 412

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Shared Memory Mirroring for Reducing Communication Overhead on Commodity Networks (Abstract)

Bruce Palmer, Pacific Northwest National Laboratory

Jarek Nieplocha, Pacific Northwest National Laboratory

Edoardo Apr?, Pacific Northwest National Laboratory

pp. 420

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Poster Session/Short Papers

"Plug-and-Play" Cluster Computing Using Mac OS X (Abstract)

Dean E. Dauger, Dauger Research, Inc.

Viktor K. Decyk, University of California at Los Angeles

pp. 430

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Improving Performance of a Dynamic Load Balancing System by Using Number of Effective Tasks (Abstract)

Min Choi, Korea Advanced Institute of Science and Technology

Jung-Lok Yu, Korea Advanced Institute of Science and Technology

Ho-Joong Kim, Korea Advanced Institute of Science and Technology

Seung-Ryoul Maeng, Korea Advanced Institute of Science and Technology

pp. 436

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Dynamic Self-Adaptive Replica Location Method in Data Grids (Abstract)

Dongsheng Li, National University of Defense Technology

Nong Xiao, National University of Defense Technology

Xicheng Lu, National University of Defense Technology

Yijie Wang, National University of Defense Technology

Kai Lu, National University of Defense Technology

pp. 442

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Efficient Distributed Disk Caching in Data Grid Management (Abstract)

Song Jiang, College of William and Mary

Xiaodong Zhang, College of William and Mary

pp. 446

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Optimized Implementation of Extendible Hashing to Support Large File System Directory (Abstract)

Rongfeng Tang, Chinese Academy of Sciences

Dan Meng, Chinese Academy of Sciences

Sining Wu, Chinese Academy of Sciences

pp. 452

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Parallel Design Pattern for Computational Biology and Scientific Computing Applications (Abstract)

Weiguo Liu, Nanyang Technological University

Bertil Schmidt, Nanyang Technological University

pp. 456

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FJM: A High Performance Java Message Library (Abstract)

Tsun-Yu Hsiao, National Chiao Tung University

Ming-chun Cheng, National Chiao Tung University

Hsin-Ta Chiao, National Chiao Tung University

Shyan-Ming Yuan, National Chiao Tung University

pp. 460

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Cluster Architecture with Lightweighted Redundant TCP Stacks (Abstract)

Hai Jin, Huazhong University of Science and Technology

Zhiyuan Shao, Huazhong University of Science and Technology

pp. 464

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From Clusters to the Fabric: The Job Management Perspective (Abstract)

Thomas Röblitz, Zuse Institute Berlin

Florian Schintke, Zuse Institute Berlin

Alexander Reinefeld, Zuse Institute Berlin

pp. 468

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Towards an Efficient Cluster-Based E-Commerce Server (Abstract)

Victoria Ungureanu, Rutgers University

Benjamin Melamed, Rutgers University

Michael Katehakis, Rutgers University

pp. 474

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A Kernel Running in a DSM — Design Aspects of a Distributed Operating System (Abstract)

R. Goeckelmann, University of Ulm

M. Schoettner, University of Ulm

S. Frenz, University of Ulm

P. Schulthess, University of Ulm

pp. 478

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Distributed Recursive Sets: Programmability and Effectiveness for Data Intensive Applications (Abstract)

Roxana E. Diaconescu, University of California at Irvine

Reidar Conradi, Norwegian University of Science and Technology

pp. 483

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Run-Time Prediction of Parallel Applications on Shared Environments (Abstract)

Byoung-Dai Lee, University of Minnesota

Jennifer M. Schopf, Argonne National Laboratory

pp. 487

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An Instance-Oriented Security Mechanism in Grid-Based Mobile Agent System (Abstract)

Tianchi Ma, Zhejiang University

Shanping Li, Zhejiang University

pp. 492

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A Hierarchical and Distributed Approach for Mapping Large Applications to Heterogeneous Grids Using Genetic Algorithms (Abstract)

Soumya Sanyal, University of Texas at Arlington

Amit Jain, University of Texas at Arlington

Sajal K. Das, University of Texas at Arlington

Rupak Biswas, NASA Ames Research Center

pp. 496

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BCFG: A Con.guration Management Tool for Heterogeneous Environments (Abstract)

Narayan Desai, Argonne National Laboratory

Andrew Lusk, Argonne National Laboratory

Rick Bradshaw, Argonne National Laboratory

Rémy Evard, Argonne National Laboratory

pp. 500

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Communication Middleware Systems for Heterogenous Clusters: A Comparative Study (Abstract)

Daniel Balkanski, Technische Universität Chemnitz

Mario Trams, Technische Universität Chemnitz

Wolfgang Rehm, Technische Universität Chemnitz

pp. 504

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QoS-Aware Adaptive Resource Management in Distributed Multimedia System Using Server Clusters (Abstract)

Mohammad Riaz Moghal, University of Engineering and Technology

Mohammad Saleem Mian, University of Engineering and Technology

pp. 508

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On the InfiniBand Subnet Discovery Process (Abstract)

Aurelio Berm?, Universidad de Castilla-La Mancha

Rafael Casado, Universidad de Castilla-La Mancha

Francisco J. Quiles, Universidad de Castilla-La Mancha

Timothy M. Pinkston, University of Southern California

Jos? Duato, Universidad Polit?cnica de Valencia

pp. 512

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Author Index

Author Index (PDF)

pp. 519