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2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops (2009)
Washington, DC USA
Nov. 1, 2009 to Nov. 4, 2009
ISBN: 978-1-4244-5121-0
TABLE OF CONTENTS
Papers
pp. i-viii
Title page (PDF)
pp. 1
L. Rueda , Sch. of Comput. Sci., Univ. of Windsor, Windsor, ON, Canada
A. Ngom , Sch. of Comput. Sci., Univ. of Windsor, Windsor, ON, Canada
C.J. Burden , Centre for Bioinformation Sci., Australian Nat. Univ., Canberra, ACT, Australia
pp. 2-7
F. Archetti , Disco, Univ. of Milano-Bicocca, Milan, Italy
E. Messina , Disco, Univ. of Milano-Bicocca, Milan, Italy
G. Ogliari , IRCCS Ist. Auxologico Italiano, Univ. of Milano, Milano, Italy
D. Mari , IRCCS Ist. Auxologico Italiano, Univ. of Milano, Milano, Italy
pp. 8-13
H.S. Lopes , Bioinf. Lab., Fed. Univ. of Technol. Parana, Curitiba, Brazil
C.R.E. Lima , Bioinf. Lab., Fed. Univ. of Technol. Parana, Curitiba, Brazil
pp. 14-19
I. Giordani , Dept. of Inf. Syst.&Commun., Univ. of Milano Bicocca, Milan, Italy
E. Messina , Dept. of Inf. Syst.&Commun., Univ. of Milano Bicocca, Milan, Italy
E. Fersini , Dept. of Inf. Syst.&Commun., Univ. of Milano Bicocca, Milan, Italy
pp. 20-25
Guoqiang Yu , Dept. of Electr.&Comput. Eng., Virginia Polytech. Inst.&State Univ., Blacksburg, VA, USA
D.J. Miller , Dept. of Electr. Eng., Pennsylvania State Univ., State College, PA, USA
Lei Song , Dept. of Electr.&Comput. Eng., Virginia Polytech. Inst.&State Univ., Blacksburg, VA, USA
C. Langefeld , Div. of Public Health Sci., Wake Forest Univ., Wake Forest, NC, USA
D. Herrington , Dept. of Internal Med., Wake Forest Univ., Wake Forest, NC, USA
Yongmei Liu , Div. of Public Health Sci., Wake Forest Univ., Wake Forest, NC, USA
Li Chen , Dept. of Electr.&Comput. Eng., Virginia Polytech. Inst.&State Univ., Blacksburg, VA, USA
pp. 26-31
M. Daoud , Dept. of Comput.&Inf. Sci., Univ. of Guelph, Guelph, ON, Canada
pp. 32-37
Min Song , Dept. of Inf. Syst., New Jersey Inst. of Technol., Newark, NJ, USA
A. Smalter , Dept. of Electr. Eng.&Comput. Sci., Univ. of Kansas, KS, USA
Jun Huan , Dept. of Electr. Eng.&Comput. Sci., Univ. of Kansas, KS, USA
S. Bleik , Dept. of Inf. Syst., New Jersey Inst. of Technol., Newark, NJ, USA
pp. 38-43
V. Nikulin , Dept. of Math., Univ. of Queensland, Brisbane, QLD, Australia
G.J. McLachlan , Dept. of Math., Univ. of Queensland, Brisbane, QLD, Australia
pp. 44-49
Lirong Tan , Dept. of Comput. Sci., City Univ. of Hong Kong, Hong Kong, China
Zhiwen Yu , Sch. of Comput. Sci.&Eng., South China Univ. of Technol., Guangzhou, China
Hau-San Wong , Dept. of Comput. Sci., City Univ. of Hong Kong, Hong Kong, China
pp. 50-55
M. Ceccarelli , Dept. of Biol.&Environ. Studies, Univ. of Sannio, Benevento, Italy
pp. 56-61
Jieyue He , Sch. of Comput. Sci.&Eng., Southeast Univ., Nanjing, China
Wei Zhong , Div. of Math&Comput. Sci., Univ. of South Carolina Upstate, Spartanburg, SC, USA
Yi Pan , Dept. of Comput. Sci., Georgia State Univ., Atlanta, GA, USA
pp. 62-67
Chunmei Liu , Dept. of Syst.&Comput. Sci., Howard Univ., Washington, DC, USA
Yinglei Song , Dept. of Math.&Comput. Sci., Univ. of MD Eastern Shore, Princess Anne, MD, USA
A.U. Andy , Dept. of Syst.&Comput. Sci., Howard Univ., Washington, DC, USA
pp. 68-72
Yinglei Song , Dept. of Math.&Comput. Sci., Univ. of MD Eastern Shore, Princess Anne, MD, USA
Junfeng Qu , Dept. of Inf. Technol., Clayton State Univ., Morrow, GA, USA
pp. 73-77
W. Murad , Dept. of Comput. Sci., San Francisco State Univ., San Francisco, CA, USA
R. Singh , Dept. of Comput. Sci., San Francisco State Univ., San Francisco, CA, USA
pp. 79-86
D. Hoksza , Dept. of Software Eng., Charles Univ. in Prague, Prague, Czech Republic
pp. 87-92
G. Liuzzi , Ist. di Analisi dei Sist. ed Inf., Consiglio Naz. delle Ric., Rome, Italy
P. Bertolazzi , Ist. di Analisi dei Sist. ed Inf., Consiglio Naz. delle Ric., Rome, Italy
pp. 93-100
A.D. Ullah , Dept. of Comput. Sci., King's Coll. London, London, UK
K. Steinhofel , Dept. of Comput. Sci., King's Coll. London, London, UK
pp. 101-106
O. Gaci , LITIS Lab., Le Havre Univ., Le Havre, France
pp. 107-112
B. Cloteaux , Nat. Inst. of Stand.&Technol., Gaithersburg, MD, USA
N. Serova , Univ. of Maryland, Baltimore, MD, USA
pp. 113-119
M. Moll , Dept. of Comput. Sci., Rice Univ., Houston, TX, USA
M.L. Baker , Verna&Marrs McLean Dept. of Biochem.&Mol. Biol., Baylor Coll. of Med., Houston, TX, USA
Wah Chiu , Verna&Marrs McLean Dept. of Biochem.&Mol. Biol., Baylor Coll. of Med., Houston, TX, USA
N. Haspel , Dept. of Comput. Sci., Rice Univ., Houston, TX, USA
pp. 120-127
Peng Chen , Bioinf. Res. Center, Nanyang Technol. Univ., Singapore, Singapore
pp. 128-135
Tu-Liang Lin , Comput. Sci. Dept., Iowa State Univ., Ames, IA, USA
Guang Song , Comput. Sci. Dept., Iowa State Univ., Ames, IA, USA
pp. 136-143
A. Kloczkowski , L.H. Baker Center for Bioinf.&Biol. Stat., Iowa State Univ., Ames, IA, USA
A.R. Katebi , L.H. Baker Center for Bioinf.&Biol. Stat., Iowa State Univ., Ames, IA, USA
pp. 144-151
A. Mucherino , COPPE, Fed. Univ. of Rio de Janeiro, Rio de Janeiro, Brazil
L. Liberti , COPPE, Fed. Univ. of Rio de Janeiro, Rio de Janeiro, Brazil
N. Maculan , COPPE, Fed. Univ. of Rio de Janeiro, Rio de Janeiro, Brazil
pp. 152-155
T.J. Taylor , Nat. Inst. of Stand.&Technol., Gaithersburg, MD, USA
pp. 156-164
Liang Zhao , Bioinf. Res. Center, Nanyang Technol. Univ., Singapore, Singapore
Jinyan Li , Bioinf. Res. Center, Nanyang Technol. Univ., Singapore, Singapore
pp. 165-172
R.T. Davis , Dept. of Math.&Comput. Sci., Western Kentucky Univ., Bowling Green, KY, USA
Di Wu , Dept. of Math.&Comput. Sci., Western Kentucky Univ., Bowling Green, KY, USA
pp. 173-180
Weitao Sun , Zhou Pei-Yuan Center for Appl. Math., Tsinghua Univ., Beijing, China
pp. 181-188
T.M. Nair , Dept. of Biol. Sci.&Comput. Sci./Inf., Indiana Univ. South Bend, South Bend, IN, USA
pp. 189-193
Vincent S. Tseng , Dept. Computer Science and Information, Engineering, National Cheng Kung University, Tainan, Taiwan, R.O.C.
Hui-Huang Hsu , Dept. Computer Science and Information, Engineering, Tamkang University, Tamsui, Taipei, Taiwan, R.O.C.
Jake Y. Chen , School of Informatics Indiana University - Purdue University, Indianapolis, IN 46202 USA
pp. 195-196
Hailong Zhu , Hong Kong Polytech. Univ., Hung Hom, China
J. Lacy , Med. Sch., Lab. for Innovative Translational Technol., Harvard Univ., Boston, MA, USA
M.W. Lingen , Depts. of Pathology, Univ. of Chicago, Chicago, IL, USA
Chi Kin Chow , Hong Kong Polytech. Univ., Hung Hom, China
K. Chan , Hong Kong Polytech. Univ., Hung Hom, China
pp. 197-202
Songfeng Zheng , Dept. of Math., Missouri State Univ., Springfield, MO, USA
pp. 203-208
Chia-Sheng Chuang , Dept. of Comput. Sci.&Eng., Nat. Taiwan Ocean Univ., Keelung, Taiwan
Zhen-Li Huang , Dept. of Comput. Sci.&Eng., Nat. Taiwan Ocean Univ., Keelung, Taiwan
Chien-Ming Chen , Dept. of Comput. Sci.&Eng., Nat. Taiwan Ocean Univ., Keelung, Taiwan
pp. 209-213
P. Chopra , Dept. of Electr. Eng., Columbia Univ., New York, NY, USA
Seung-Mo Hong , Med. Instns., Dept. of Pathology, Johns Hopkins Univ., Baltimore, MD, USA
pp. 214-219
Tianxiao Huan , Life Sci. Sch., Shandong Univ., Jinan, China
Xiaogang Wu , Sch. of Inf., Indiana Univ., Indianapolis, IN, USA
Zengliang Bai , Life Sci. Sch., Shandong Univ., Jinan, China
J.Y. Chen , Sch. of Inf., Indiana Univ., Indianapolis, IN, USA
pp. 220-225
Yu-Cheng Liu , Dept. of Comput. Sci.&Inf. Eng., Nat. Cheng-Kung Univ., Tainan, Taiwan
Chi-Wei Liu , Dept. of Comput. Sci.&Inf. Eng., Nat. Cheng-Kung Univ., Tainan, Taiwan
V.S. Tseng , Dept. of Comput. Sci.&Inf. Eng., Nat. Cheng-Kung Univ., Tainan, Taiwan
pp. 226-230
Ming-Yuan Huang , Dept. of Comput. Sci., Nat. Tsing Hua Univ., Hsinchu, Taiwan
Chia-Han Chu , Dept. of Comput. Sci., Nat. Tsing Hua Univ., Hsinchu, Taiwan
P. Tang , Bioinf. Center, Chang Gung Univ., Taoyuan, Taiwan
Chuan Yi Tang , Dept. of Comput. Sci., Nat. Tsing Hua Univ., Hsinchu, Taiwan
pp. 232-237
B.S. Adagarla , Bioinf. Core Facility, Univ. of Kansas, Lawrence, KS, USA
H.L. Gerald , Bioinf. Core Facility, Univ. of Kansas, Lawrence, KS, USA
M. Visvanathan , Bioinf. Core Facility, Univ. of Kansas, Lawrence, KS, USA
pp. 238-242
Hui Jiang , Dept of Comp Sc&Engg, York Univ., Toronto, ON, Canada
Pingzhao Hu , Dept of Comp. Sc&Eng., Univ. of Toronto, Toronto, ON, Canada
pp. 243-248
Huitao Sheng , Dept. of Electr. Eng.&Comput. Sci., Syracuse Univ., Syracuse, NY, USA
K. Mehrotra , Dept. of Electr. Eng.&Comput. Sci., Syracuse Univ., Syracuse, NY, USA
C. Mohan , Dept. of Electr. Eng.&Comput. Sci., Syracuse Univ., Syracuse, NY, USA
R. Raina , Dept. of Biol., Syracuse Univ., Syracuse, NY, USA
pp. 249-253
Z. Obradovic , Center for Inf. Sci.&Technol., Temple Univ., Philadelphia, PA, USA
D. Smith , Dept. of Mol.&Med. Pharmacology, UCLA, CA, USA
O. Bodenreider , Lister Hill Nat. Center for Biomed. Commun., U.S. Nat. Libr. of Med., Washington, DC, USA
Li An , Dept. of Comput.&Inf. Sci., Temple Univ., Philadelphia, PA, USA
pp. 254-259
A. Bhattacharjee , Dept. of Comput. Sci., Wayne State Univ., Detroit, MI, USA
K.Z. Sultana , Dept. of Comput. Sci., Wayne State Univ., Detroit, MI, USA
pp. 261-266
B.E. Skariah , Sch. of Biotechnol., Amrita Vishwa Vidyapeetham, Kollam, India
B.G. Nair , Sch. of Biotechnol., Amrita Vishwa Vidyapeetham, Kollam, India
G.H. Lushington , Bioinf. Core Facility, Univ. of Kansas, Lawrence, KS, USA
S. Subramaniam , Sch. of Biotechnol., Amrita Vishwa Vidyapeetham, Kollam, India
M. Visvanathan , Bioinf. Core Facility, Univ. of Kansas, Lawrence, KS, USA
pp. 267-271
Shuguang Wang , Intell. Syst. Program, Univ. of Pittsburgh, Pittsburgh, PA, USA
M. Hauskrecht , Dept. of Comput. Sci., Univ. of Pittsburgh, Pittsburgh, PA, USA
S. Visweswaran , Dept. of Biomed. Inf., Univ. of Pittsburgh, Pittsburgh, PA, USA
pp. 272-278
P. Topham , Lnx Res. LLC, Orange, CA, USA
G. Gonzalez , Dept. of Biomed. Inf., Arizona State Univ., Phoenix, AZ, USA
pp. 279-286
Ming Jia , Dept. of Electr.&Comput. Eng., Iowa State Univ., Ames, IA, USA
S. Swaminathan , Dept. of Genetics Dev.&Cell Biol., Iowa State Univ., Ames, IA, USA
E.S. Wurtele , Dept. of Genetics Dev.&Cell Biol., Iowa State Univ., Ames, IA, USA
J. Dickerson , Dept. of Electr.&Comput. Eng., Iowa State Univ., Ames, IA, USA
pp. 287-294
R.P. Futrelle , Biol. Knowledge Lab., Northeastern Univ., Boston, MA, USA
T. McCormack , Biol. Knowledge Lab., Northeastern Univ., Boston, MA, USA
pp. 296-301
J. Allen , Univ. of Rochester, Rochester, NY, USA
G. Ferguson , Univ. of Rochester, Rochester, NY, USA
J. Quinn , Univ. of Rochester, Rochester, NY, USA
L. Galescu , Inst. for Human&Machine Cognition, Pensacola, FL, USA
pp. 302-307
S. Agarwal , Univ. of Wisconsin-Milwaukee, Milwaukee, WI, USA
N. Frid , Univ. of Wisconsin-Milwaukee, Milwaukee, WI, USA
pp. 308-313
I. Solti , Dept. of Med. Educ.&Biomed. Inf., Univ. of Washington, Seattle, WA, USA
C.R. Cooke , Div. of Pulmonary&Critical care, Univ. of Michigan, Ann Arbor, MI, USA
Fei Xia , Dept. of Linguistics, Univ. of Washington, Seattle, WA, USA
M.M. Wurfel , Div. of Pulmonary&Critical Care, Univ. of Washington, Seattle, WA, USA
pp. 314-319
H. Suominen , Dept. of Inf. Technol., Univ. of Turku, Turku, Finland
S. Salantera , Dept. of Nursing Sci., Univ. of Turku, Turku, Finland
H. Karsten , Dept. of Inf. Technol., Abo Akad. Univ., Abo, Finland
T. Salakoski , Dept. of Inf. Technol., Univ. of Turku, Turku, Finland
pp. 325-340
J. Ely , Univ. of Iowa, Iowa City, IA, USA
Yong-Gang Cao , Univ. of Wisconsin-Milwaukee, Milwaukee, WI, USA
pp. 331-335
B. Anchang , Inst. of Functional Genomics&Bioinf., Univ. of Regensburg, Regensburg, Germany
R. Spang , Inst. of Functional Genomics&Bioinf., Univ. of Regensburg, Regensburg, Germany
P.J. Oefner , Inst. of Functional Genomics&Bioinf., Univ. of Regensburg, Regensburg, Germany
M. Sadeh , Inst. of Functional Genomics&Bioinf., Univ. of Regensburg, Regensburg, Germany
J. Jacob , Inst. of Functional Genomics&Bioinf., Univ. of Regensburg, Regensburg, Germany
M.O. Vlad , Dept. of Chem., Stanford Univ., Stanford, CA, USA
A. Tresch , Dept. of Chem.&Biochem., Ludwig-Maximilians-Univ. Muenchen, Munich, Germany
pp. 337
Ying-Wooi Wan , Lane Dept. of CSEE, West Virginia Univ., Morgantown, WV, USA
N.L. Guo , Lane Dept. of CSEE, West Virginia Univ., Morgantown, WV, USA
pp. 338
Kuen-Jou Wei , Dept. of Microbiol., Dev. Center for Biotechnol., Taipei, Taiwan
Shih-Chong Tsai , Dept. of Microbiol., Dev. Center for Biotechnol., Taipei, Taiwan
Chu-His Fan , Dept. of Microbiol., Dev. Center for Biotechnol., Taipei, Taiwan
pp. 339
Kwangmin Choi , Sch. of Inf.&Comput., Indiana Univ., Bloomington, IN, USA
Sun Kim , Sch. of Inf.&Comput., Indiana Univ., Bloomington, IN, USA
pp. 340
P. Krubasik , Biomax Inf. AG, Martinsried, Germany
S. Losko , Biomax Inf. AG, Martinsried, Germany
M. Hernandez , Res. Unit on Biomed. Inf., Univ. Pompeu Fabra, Barcelona, Spain
J. Villa i Freixa , Res. Unit on Biomed. Inf., Univ. Pompeu Fabra, Barcelona, Spain
pp. 341
C.O. Tudor , Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
K. Vijay-Shanker , Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
C.J. Schmidt , Animal&Food Sci., Univ. of Delaware, Newark, DE, USA
pp. 342
C. Sengupta-Gopalan , Dept. of Plant&Environ. Sci., New Mexico State Univ., Las Cruces, NM, USA
P.K. Yelavarthi , Dept. of Comput. Sci., New Mexico State Univ., Las Cruces, NM, USA
D. Ranjan , Dept. of Comput. Sci., Old Dominion Univ., Norfolk, VA, USA
pp. 343
S.K.-W. Tsui , Sch. of Biomed. Sci., Chinese Univ. of Hong Kong, Hong Kong, China
Ka-Kit Leung , Hong Kong Bioinf. Centre, Chinese Univ. of Hong Kong, Hong Kong, China
pp. 344
Kyung Dae Ko , Dept. of Biol., Penn State Univ., University park, PA, USA
Yoo Jin Hong , Dept. of CSE, Penn State Univ., University park, PA, USA
D.B. van Rossum , Dept. of Biol., Penn State Univ., University park, PA, USA
R.L. Patterson , Dept. of Biol., Penn State Univ., University park, PA, USA
pp. 345
M. Torii , ISIS Center, Georgetown Univ. Med. Center, Washington, DC, USA
Jinlian Wang , Dept. of Oncology, Georgetown Univ. Med. Center, Washington, DC, USA
Hongfang Liu , Dept. of Biostat., Bioinf.&Biomath., Georgetown Univ. Med. Center, Washington, DC, USA
G.W. Hart , Sch. of Med., Johns Hopkins Univ., Baltimore, MD, USA
pp. 346
Li Liao , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
C.H. Wu , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
pp. 347
K.S. Decker , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
A.J. Stachnik , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
Li Jin , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
pp. 348
R. Homayouni , Bioinf. Program, Univ. of Memphis, Memphis, TN, USA
N.A. Furlotte , Comput. Sci. Dept., Univ. of California, Los Angeles, CA, USA
K.E. Heinrich , Computable Genomix LLC, Memphis, TN, USA
E.O. George , Dept. of Math., Univ. of Memphis, Memphis, TN, USA
M.W. Berry , Dept. of Comput. Sci., Univ. of Tennessee, Knoxville, TN, USA
pp. 349
C. Arighi , Delaware Biotechnol. Inst., Univ. of Delaware, Newark, DE, USA
J. Nchoutmboube , Delaware Biotechnol. Inst., Univ. of Delaware, Newark, DE, USA
C.O. Tudor , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
K. Vijay-Shanker , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
A. Siu , Dept. of Comput.&Inf. Sci., Univ. of Delaware, Newark, DE, USA
pp. 350
Yoon Kyeong Lee , Dept. of Bio&Inf. Technol., Chungbuk Nat. Univ., Cheongju, South Korea
Hak Yong Kim , Dept. of Biochem., Chungbuk Nat. Univ., Cheongju, South Korea
pp. 351
J.R. White , Appl. Math.&Sci. Comput. Program, Univ. of Maryland - Coll. Park, College Park, MD, USA
pp. 352
A. Goni , Fac. de Inf., Univ. of the Basque Country, Donostia, Spain
A. Illarramendi , Fac. de Inf., Univ. of the Basque Country, Donostia, Spain
A. Burgos , Fac. de Inf., Univ. of the Basque Country, Donostia, Spain
pp. 353
P. Garcia-Gutierrez , Dept. de Quim., Univ. Autonoma Metropolitana-Iztapalapa, Mexico City, Mexico
A. Landa , Dept. de Microbiologia y Parasitologia, Univ. Nac. Autonoma de Mexico, Mexico City, Mexico
A. Rojo-Dominguez , Dept. de Quim., Univ. Autonoma Metropolitana-Iztapalapa, Mexico City, Mexico
pp. 354
D.J. Miller , Dept. of Electr. Eng., Pennsylvania State Univ., State College, PA, USA
Yuanjian Feng , Dept. of Electr.&Comput. Eng., Virginia Polytech. Inst.&State Univ., Blacksburg, VA, USA
Yue Wang , Dept. of Electr.&Comput. Eng., Virginia Polytech. Inst.&State Univ., Blacksburg, VA, USA
pp. 355
Yeona Kang , Mater. Sci. Dept., Stony Brook Univ., Stony Book, NY, USA
pp. 356
J.L. Solka , Dept. of Bioinf.&Comput. Biol., George Mason Univ., Manassas, VA, USA
D.H. Millis , Dept. of Bioinf.&Comput. Biol., George Mason Univ., Manassas, VA, USA
pp. 357
P. Bhattacharjee , Dept. of Comput. Sci.&Applic., Virginia Tech, Blacksburg, VA, USA
N. Ramakrishnan , Dept. of Comput. Sci.&Applic., Virginia Tech, Blacksburg, VA, USA
L.S. Heath , Dept. of Comput. Sci.&Applic., Virginia Tech, Blacksburg, VA, USA
A.V. Onufriev , Dept. of Comput. Sci.&Phys., Virginia Tech, Blacksburg, VA, USA
pp. 358
A. Chernikov , Dept. of Comput. Sci., Coll. of William&Mary, Williamsburg, VA, USA
N. Chrisochoides , Dept. of Comput. Sci., Coll. of William&Mary, Williamsburg, VA, USA
pp. 359
Author index (PDF)
pp. 1-3
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