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Fourth IEEE Symposium on Bioinformatics and Bioengineering (BIBE'04)
Taichung, Taiwan, ROC
May 19-May 21
ISBN: 0-7695-2173-8
Table of Contents
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Keynote Speech
Invited Speech
Zhengchang Su, University of Georgia at Athens
PhuongAn Dam, University of Georgia at Athens
Victor Olman, University of Georgia at Athens
Ying Xu, University of Georgia at Athens
pp. 5
Session A1: Bioengineering
Yung-Kang Chen, Southern Taiwan University of Technology
Hsien-Tsai Wu, Southern Taiwan University of Technology
Chih-Kai Chi, Southern Taiwan University of Technology
Wei-Chuan Tsai, National Cheng Kung University Medical Center
Ju-Yi Chen, National Cheng Kung University Medical Center
Ming-Chun Wang, National Cheng Kung University Medical Center
pp. 17
Daniele Masotti, Politecnico di Torino, Italy
Elisa Ficarra, Politecnico di Torino, Italy
Enrico Macii, Politecnico di Torino, Italy
Luca Benini, University of Bologna, Italy
pp. 22
Gloria Y. Yang, University of California at Irvine
Vasudev J. Bailey, University of California at Irvine
Gisela Lin, University of California at Irvine
William C. Tang, University of California at Irvine
Joyce H. Keyak, University of California at Irvine; College of Medicine
pp. 30
W. Zheng, Institute for Infocomm Research, Singapore
A. Aziz, Institute for Infocomm Research, Singapore
I. Volkov, Institute for Infocomm Research, Singapore
X. Ma, Institute for Infocomm Research, Singapore
F. S. Chau, National University of Singapore
M. Ang, Jr., National University of Singapore
W. L. Nowinski, Institute for Infocomm Research, Singapore
pp. 38
Session B1: Data Integration and Protein Folding
Zina Ben Miled, Indiana University Purdue University Indianapolis
Lingma Lu, Indiana University Purdue University Indianapolis
Malika Mahoui, Indiana University Purdue University Indianapolis
Jessica Chen, Indiana University Purdue University Indianapolis
Bukhres A. Omran, Indiana University Purdue University Indianapolis
Ning Gao, Indiana University Purdue University Indianapolis
Yue He, Indiana University Purdue University Indianapolis
pp. 65
Eunice E. Santos, Virginia Polytechnic Institute & State University
Eugene Santos, Jr., University of Connecticut, Storrs
pp. 79
W. L. Hsu, Academia Sinica, Taipei, Taiwan
J. M. Chang, Academia Sinica, Taipei, Taiwan
W. C. Chou, Academia Sinica, Taipei, Taiwan
J. B. Chen, Academia Sinica, Taipei, Taiwan
K. P. Wu, Academia Sinica, Taipei, Taiwan
T. Y. Sung, Academia Sinica, Taipei, Taiwan
C. F. Chang, Academia Sinica, Taipei, Taiwan
W. J. Wu, Academia Sinica, Taipei, Taiwan
T. H. Huang, Academia Sinica, Taipei, Taiwan
pp. 89
Session A2: Medical Image Processing I
Ruey-Feng Chang, National Chung Cheng University, Chiayi, Taiwan
Chii-Jen Chen, National Chung Cheng University, Chiayi, Taiwan
Ming-Feng Ho, National Chung Cheng University, Chiayi, Taiwan
Dar-Ren Chen, China Medical University and Hospital, Taichung, Taiwan
Woo Kyung Moon, Seoul National University Hospital, Korea
pp. 100
Louise Chuang, National Cheng Kung University, Tainan, Taiwan
Jeng-Yang Hwang, ASN Technology Corp., Taiwan
Hen-Chang Chang, ASN Technology Corp., Taiwan
I-Chang Jou, National Kaohsiung First University of Science and Technology, Taiwan
Shiang-Bin Jong, Kaohsiung Medical University, Taiwan
pp. 108
Wenlong Qian, Institue for Infocomm Research, Singapore; National University of Singapore, Singapore
Zujun Hou, Institue for Infocomm Research, Singapore
Qingmao Hu, Institue for Infocomm Research, Singapore
Aziz Aamer, Institue for Infocomm Research, Singapore
Wieslaw L. Nowinski, Institue for Infocomm Research, Singapore
pp. 115
Session B2: Parallel Processing and Primer Design
Weng-Long Chang, Southern Taiwan University of Technology, Taiwan
Michael (Shan-Hui) Ho, Southern Taiwan University of Technology, Taiwan
Minyi Guo, The University of Aizu, Aizu-Wakamatsu City, Japan
pp. 125
Damon Shing-Min Liu, National Chung Cheng University, Chiayi, Taiwan
Che-Hao Wu, National Chung Cheng University, Chiayi, Taiwan
pp. 134
Shih-Nung Chen, Taichung Healthcare and Management University, Taiwan
Jeffrey J. P. Tsai, Taichung Healthcare and Management University, Taiwan; University of Illinois, Chicago
Chih-Wei Huang, Taichung Healthcare and Management University, Taiwan
Rong-Ming Chen, Taichung Healthcare and Management University, Taiwan
Raymond C. K. Lin, Taichung Healthcare and Management University, Taiwan
pp. 142
K. Rocha, Universidade Federal do Rio Grande do Norte, Brazil
C. Medeiros, Universidade Federal do Rio Grande do Norte, Brazil
M. Monteiro, Universidade Federal do Rio Grande do Norte, Brazil
L. Gon?alves, Universidade Federal do Rio Grande do Norte, Brazil
P. Marinho, Universidade Federal do Rio Grande do Norte, Brazil
pp. 149
Session A3: Medical Image Processing II
Adrian S. Barb, University of Missouri, Columbia
Chi-Ren Shyu, University of Missouri, Columbia
Yash Sethi, University of Missouri, Columbia
pp. 175
Tang-Kai Yin, Chia-Nan University of Pharmacy and Science, Tainan, Taiwan, R.O.C.
Nan-Tsing Chiu, National Cheng Kung University, Tainan, Taiwan, R.O.C.
pp. 183
Rania Hussein, Old Dominion University, Norfolk, VA
Frederic (Rick) McKenzie, Old Dominion University, Norfolk, VA
Paul Schellhammer, Eastern Virginia Medical School, Norfolk, VA
Jose Diaz, Eastern Virginia Medical School, Norfolk, VA
pp. 191
Session B3: Medical Informatics
Marco Masseroli, Politecnico di Milano, Italy; MultiMedica Hospitals, Milano, Italy
Andrea Stella, Politecnico di Milano, Italy
Natalia Meani, IEO - European Institute of Oncology, Milano, Italy; IFOM - FIRC Institute of Molecular Oncology, Milano, Italy
Myriam Alcalay, IEO - European Institute of Oncology, Milano, Italy; IFOM - FIRC Institute of Molecular Oncology, Milano, Italy
Francesco Pinciroli, Politecnico di Milano, Italy; MultiMedica Hospitals, Milano, Italy
pp. 199
D. P?rez-Rey, Polytechnic University of Madrid, Spain
V. Maojo, Polytechnic University of Madrid, Spain
M. Garc?a-Remesal, Polytechnic University of Madrid, Spain
R. Alonso-Calvo, Polytechnic University of Madrid, Spain
pp. 207
Ferran Sanz, Municipal Institute of Medical Research - IMIM, Barcelona, Spain
Carlos D?az, Municipal Institute of Medical Research - IMIM, Barcelona, Spain
Fernando Martin-Sanchez, Bioinformatics Unit, Institute of Health Carlos III, Majadahonda, Madrid, Spain
Julio Bonis, Municipal Institute of Medical Research - IMIM, Barcelona, Spain
pp. 215
V. L?pez-Alonso, Medical Bioinformatics Unit, Institute of Health Carlos III, Ctra. Majadahonda a Pozuelo, Madrid, Spain
J. P. Sanchez, Medical Bioinformatics Unit, Institute of Health Carlos III, Ctra. Majadahonda a Pozuelo, Madrid, Spain
I. Liebana, Medical Bioinformatics Unit, Institute of Health Carlos III, Ctra. Majadahonda a Pozuelo, Madrid, Spain
I. Hermosilla, Medical Bioinformatics Unit, Institute of Health Carlos III, Ctra. Majadahonda a Pozuelo, Madrid, Spain
F. Mart?n-S?nchez, Medical Bioinformatics Unit, Institute of Health Carlos III, Ctra. Majadahonda a Pozuelo, Madrid, Spain
pp. 222
M. Garc?a-Remesal, Polytechnical University of Madrid, Spain
V. Maojo, Polytechnical University of Madrid, Spain
H. Billhardt, University King Juan Madrid, Spain0
J. Crespo, Polytechnical University of Madrid, Spain
R. Alonso-Calvo, Polytechnical University of Madrid, Spain
D. P?rez-Rey, Polytechnical University of Madrid, Spain
F. Martin, Institute of Health Carlos III, Madrid, Spain
A. Sousa, IEETA. University of Aveiro, Portugal
pp. 227
Banquet Speech
Session A4: Gene Expression
Kevin Y. Yip, University of Hong Kong
David W. Cheung, University of Hong Kong
Michael K. Ng, University of Hong Kong
Kei-Hoi Cheung, Yale University
pp. 259
Fang-Xiang Wu, University of Saskatchewan, Canada
Wen-Jun Zhang, University of Saskatchewan, Canada
Anthony J. Kusalik, University of Saskatchewan, Canada
pp. 267
Zonghong Zhang, National University of Singapore
Alvin Teo, National University of Singapore
Beng Chin Ooi, National University of Singapore
Kian-Lee Tan, National University of Singapore
pp. 283
Session B4: Transcriptome and Functional Genomics
Hsun-Chang Chang, Providence University, Taiwan
Po-Shun Yu, Providence University, Taiwan
Tze-Wei Huang, Providence University, Taiwan
Yaw-Ling Lin, National Science Council, Taiwan
Fang-Rong Hsu, Taichung Healthcare and Management University, Taiwan
pp. 293
F. R. Hsu, Taichung Healthcare & Management University; Taichung Healthcare & Management University
Hwan-You Chang, National Tsing-Hua University, Hsin-chu, Taiwan
Yaw-Lin Lin, Providence University
Yin-Te Tsai, Providence University
Hui-Ling Peng, National Chiao-Tung University
Ying Tsong Chen, National Chiao-Tung University
Che Feng Chen, Taichung Healthcare & Management University
Chia Yang Cheng, Taichung Healthcare & Management University
Chia-Hung Liu, Taichung Healthcare & Management University
Min Yao Shih, Taichung Healthcare & Management University
pp. 310
Jorng-Tzong Horng, National Central University, Taiwan; National Central University, Taiwan
Kai-Chih Hu, National Central University, Taiwan
Li-Cheng Wu, National Central University, Taiwan
Hsien-Da Huang, National Chiao-Tung University, Taiwan
Horn-Cheng Lai, Tri-Service General Hospital, Taiwan
Ton-Yuen Chu, Tri-Service General Hospital, Taiwan
pp. 325
Y-W. Deng, National Yang Ming University
C-H. Wei, National Yang Ming University
U-C. Yang, National Yang Ming University
pp. 333
Session A5: Microarray Data Analysis
Osman Abul, University of Calgary, Alberta, Canada; Middle East Technical University, Ankara, Turkey
Reda Alhajj, University of Calgary, Alberta, Canada
Faruk Polat, Middle East Technical University, Ankara, Turkey
pp. 337
Hsieh-Hui Yu, National Cheng Kung University, Tainan, Taiwan
Vincent Shin-Mu Tseng, National Cheng Kung University, Tainan, Taiwan
Jiin-Haur Chuang, Chang Gung University
pp. 345
Han-Yu Chuang, National Taiwan University, Taipei
Hongfang Liu, Columbia University, New York, NY
Stuart Brown, New York University, NY
Cameron McMunn-Coffran, Fordham University, New York, NY
Cheng-Yan Kao, National Taiwan University, Taipei
D. Frank Hsu, Fordham University, New York, NY
pp. 358
Selnur Erdal, Columbus Children's Hospital Research Institute (CCRI), Columbus, Ohio; The Ohio State University
Ozgur Ozturk, The Ohio State University
David Armbruster, Columbus Children's Hospital Research Institute (CCRI), Columbus, Ohio; The Ohio State University
Hakan Ferhatosmanoglu, The Ohio State University
William C. Ray, Columbus Children's Hospital Research Institute (CCRI), Columbus, Ohio; The Ohio State University
pp. 366
Session B5: Homology Search
Kwok Pui Choi, National University of Singapore (NUS), Singapore
pp. 379
Gregory Kucherov, LORIA/INRIA-Lorraine, France
Laurent Noé, LORIA/INRIA-Lorraine, France
Yann Ponty, LRI, France
pp. 387
Hsiao Ping Lee, National Tsing-Hua University, Taiwan
Yin Te Tsai, Providence University, Taiwan
Ching Hua Shih, National Tsing-Hua University, Taiwan
Tzu Fang Sheu, National Tsing-Hua University, Taiwan
Chuan Yi Tang, National Tsing-Hua University, Taiwan
pp. 395
S. Alireza Aghili, University of California Santa Barbara
Ozgur D. Sahin, University of California Santa Barbara
Divyakant Agrawal, University of California Santa Barbara
Amr El Abbadi, University of California Santa Barbara
pp. 403
I-Hsuan Yang, National Taiwan University
Sheng-Ho Wang, National Taiwan University
Yang-Ho Chen, National Taiwan University
Pao-Hsian Huang, National Taiwan University
Liang Ye, Iowa State University
Xiaoqiu Huang, Iowa State University
Kun-Mao Chao, National Taiwan University
pp. 411
Session A6: Proteomics
Anand Kumar, University of Pavia, Italy
Barry Smith, University at Buffalo, USA
pp. 419
Darby Tien-Hau Chang, National Taiwan University, Taipei
Chien-Yu Chen, National Taiwan University, Taipei
Yen-Jen Oyang, National Taiwan University, Taipei
Hsueh-Fen Juan, National Taipei University of Technology, Taiwan
Hsuan-Cheng Huang, Academic Sinica, Taipei, Taiwan
pp. 427
Dong-Soo Han, Information and Communications University, Korea
Hong-Soog Kim, Information and Communications University, Korea
Woo-Hyuk Jang, Information and Communications University, Korea
Sung-Doke Lee, Information and Communications University, Korea
pp. 434
Saravanan Dayalan, RMIT University, Melbourne, Australia
Savitri Bevinakoppa, RMIT University, Melbourne, Australia
pp. 442
Session B6: Sequence Analysis
Paul Hsueh-Min Chang, National Tsing-Hua University, Hsinchu, Taiwan
Von-Wun Soo, National Tsing-Hua University, Hsinchu, Taiwan
Tai-Yu Chen, National Tsing-Hua University, Hsinchu, Taiwan
Wei-Shen Lai, National Tsing-Hua University, Hsinchu, Taiwan
Shiun-Cheng Su, National Tsing-Hua University, Hsinchu, Taiwan
Yu-Ling Huang, National Tsing-Hua University, Hsinchu, Taiwan
pp. 451
Falcon F. M. Liu, Taichung Healthcare and Management University, Taiwan
Jeffrey J. P. Tsai, Taichung Healthcare and Management University, Taiwan; University of Illinois at Chicago, USA
R. M. Chen, Taichung Healthcare and Management University
S. N. Chen, Taichung Healthcare and Management University
S. H. Shih, Taichung Healthcare and Management University
pp. 459
Scott Mann, Deakin University, Melbourne, Australia
Yi-Ping Phoebe Chen, Deakin University, Melbourne, Australia
Luke Eaton, Deakin University, Melbourne, Australia
pp. 467
Chia-Hung Chang, National Taiwan University, Taipei
Han-Yu Chuang, National Taiwan University, Taipei
Yi-Hung Chiang, National Taiwan University, Taipei
Chien-Shun Chiou, Center for Disease Control, Taiwan
Hsueh-I Lu, Academia Sinica, Taipei, Taiwan
Cheng-Yan Kao, National Taiwan University, Taipei
pp. 475
Xiaoan Dong, National University of Singapore
Sam Yuan Sung, National University of Singapore
Wing-Kin Sung, National University of Singapore
Chew Lim Tan, National University of Singapore
pp. 483
Session A7: Structural Biology
In-Yee Lee, Academia Sinica, Taipei, Taiwan; National Taiwan University, Taipei
Ta-Tsen Soong, Academia Sinica, Taipei, Taiwan
Jan-Ming Ho, Academia Sinica, Taipei, Taiwan
Ming-Jing Hwang, Academia Sinica, Taipei, Taiwan
pp. 516
Pin-Hao Chi, University of Missouri, Columbia, MO
Grant Scott, University of Missouri, Columbia, MO
Chi-Ren Shyu, University of Missouri, Columbia, MO
pp. 522
Session B7: Algorithms
Chuan-Min Lee, National Chung Cheng University, Taiwan
Ling-Ju Hung, National Chung Cheng University, Taiwan
Maw-Shang Chang, National Chung Cheng University, Taiwan
Chuan-Yi Tang, National Tsing Hua University, Taiwan
pp. 533
Tatsuya Akutsu, Kyoto University, Japan
Morihiro Hayashida, Kyoto University, Japan
Etsuji Tomita, The University of Electro-Communications, Japan
Jun'ichi Suzuki, The University of Electro-Communications, Japan
Katsuhisa Horimoto, The University of Tokyo, Japan
pp. 537
H. L. Chan, University of Hong Kong
T. W. Lam, University of Hong Kong
W. K. Sung, National University of Singapore
Prudence W. H. Wong, University of Hong Kong
S. M. Yiu, University of Hong Kong
pp. 545
M. C. Chen, National Chi-Nan University, Taiwan
R. C. T. Lee, National Chi-Nan University, Taiwan
pp. 553
Session A8: Protein-Protein Interactions
Soon-Heng Tan, Institute for Infocomm Research, Singapore
Win-Kin Sung, National University of Singapore
See-Kiong Ng, Institute for Infocomm Research, Singapore
pp. 568
Shinsuke Dohkan, The University of Tokyo, Japan
Asako Koike, The University of Tokyo, Japan; Hitachi Ltd., Japan
Toshihisa Takagi, The University of Tokyo, Japan
pp. 576
Session B8: Algorithms and Intelligent Systems
G. Cooper, Wright State University, Dayton, OH
M. Raymer, Wright State University, Dayton, OH
T. Doom, Wright State University, Dayton, OH
D. Krane, Wright State University, Dayton, OH
N. Futamura, Wright State University, Dayton, OH
pp. 587
Jijun Tang, University of New Mexico, Albuquerque
Bernard M. E. Moret, University of New Mexico, Albuquerque
Liying Cui, Pennsylvania State University
Claude W. dePamphilis, Pennsylvania State University
pp. 592
Fei Xie, Department of EECS and Biomedical Engineering
Phillip C-y. Sheu, Department of EECS and Biomedical Engineering
Arthur Lander, Department of Developmental Cell Biology
Vittorio Christini, University of California, Irvine
pp. 600
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