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Issue No.06 - November/December (2007 vol.9)
pp: 70-75
Kourosh Malek , National Research Council of Canada
ABSTRACT
This second of a two-part series focuses on diffusion simulation and explores the role of chiral recognition during solute transport in cross-linked protein crystals.
INDEX TERMS
computer simulations, protein crystals, lattice, diffusion
CITATION
Kourosh Malek, "Transport in Protein Crystals, Part II: Diffusion Simulation and Chiral Recognition", Computing in Science & Engineering, vol.9, no. 6, pp. 70-75, November/December 2007, doi:10.1109/MCSE.2007.126
REFERENCES
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9. K. Malek, T. Odijk, and M.-O. Coppens, "Diffusion in Protein Crystals: A Computer Simulation," ChemPhysChem, vol. 5, 18 Oct. 2004, pp.1596–1599.
10. K. Malek, "Solute transport in orthorhombic lysozyme Crystals: A molecular Simulation Study," to be published in Biotechnology Letters, 2007; doi 10.1007/s10529-007-9466-7.
11. O.D. Velev, E.W. Kaler, and A.M. Lenhoff, "Surfactant Diffusion into Lysozyme Crystal Matrices Investigated by Quantitative Florescence Microscopy," J. Physical Chemistry B, vol. 104, no. 39, 2000, pp. 9267–9275.
12. A. Cvetkovic et al., "Quantification of Binary Diffusion in Protein Crystals," J. Physical Chemistry B, vol. 109, no. 21, 2005, pp. 10561–10566.
13. A. Cvetkovic et al., "Relation between Pore Sizes of Protein Crystals and Anisotropic Solute Diffusivities," J. Am. Chemical Soc., vol. 127, no. 3, 2005, pp. 875–879.
14. H. Nikaido and E.Y. Rosenberg, "Effect of Solute Size on Diffusion Rates through the Transmembrane Pores of the Outer Membrane of Escherichia Coli," J. General Physiology, vol. 77, no. 2, 1981, pp. 121–135.
15. V.N. Morozov et al. "Permeability of Lysozyme Tetragonal Crystals to Water," European Biophysics J., vol. 24, no. 2, 1995, pp. 93–98.
16. A. Vuolanto, Cross-Linked Protein Crystal Technology in Bioseparation and Biocatalysis Applications, PhD thesis, Dept. Chemical Eng., Helsinki Univ. Technology, 2004.
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